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- Table of Contents
Plan MAST2 staining in paraffin sections using the catalog antibody at 1:100–1:300 (datasheet). Expect general cytoplasmic staining (HPA tissue IHC), but interpret intensity cautiously because antibody staining has low consistency with RNA expression (HPA tissue IHC).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | General cytoplasmic tissue staining (HPA tissue IHC) | |
| Staining pattern | Cytoplasmic staining in glandular and neuronal cells (HPA tissue IHC) | |
| Antigen retrieval | Citrate pH 6.0 HIER, 95–98 °C, 20 min (rule: cytoplasmic / membrane antigen) | |
| Positive control | Adrenal gland+4 more · see all | |
| Negative control | Adipose tissue+1 more · see all |
| Fixation | Keep section fixation consistent. (standard IHC practice; not target-specific) | |
| Caveat | Antibody staining has low consistency with RNA expression (HPA tissue IHC) | |
| Regulation | Expression regulation is not specified (UniProt) | |
| Isoform / epitope | Two isoforms; epitope coverage is unspecified (UniProt) |
Compare the catalog antibody’s IHC-P protocol with one published MAST2 IHC protocol using paraffin sections (PMC3661464).
| Sample | Paraffin-embedded human lung cancer tissue; fixative not specified (datasheet A07003-2) |
| Fixation | Image fixative and duration unreported (datasheet A07003-2); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat-induced epitope retrieval in citrate buffer, pH 6.0, 20 min at 95–98 °C (standard rule: cytoplasmic / membrane antigen) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% normal serum of the secondary host, 30 min, room temperature (standard) |
| Primary antibody | Rabbit anti-MAST2, 1:100-1:300 (datasheet A07003-2) |
| Primary incubation | Overnight at 4 °C (standard) |
| Detection | HRP-polymer secondary, DAB chromogen 5–10 min (standard) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | MAST2-positive staining in glandular cells of adrenal gland (HPA tissue IHC: Medium). HPA tissue profile: General cytoplasmic expression. No signal in the no-primary control. |
In paraffin IHC, expect mainly cytoplasmic staining in glandular, respiratory epithelial, neuronal, Purkinje, and endothelial cells listed as medium-positive by HPA (HPA tissue IHC). A submembranous component is plausible when MAST2 interacts with CDHR2, although MAST2 has no transmembrane segment (UniProt Q6P0Q8 localisation and topology). HPA rates the tissue staining Approved but reports low consistency with RNA expression (HPA tissue IHC).
| Cytoplasmic signal in bronchial respiratory epithelium or cerebellar Purkinje cells (HPA tissue IHC). | This fits the reported compartment and cell types; HPA records medium staining in both examples (HPA tissue IHC). Score the relevant cells rather than treating every cell in the section as equally positive (general IHC practice). |
| Strong, predominantly nuclear staining with little cytoplasmic signal (HPA tissue IHC; HPA subcellular ICC-IF). | That distribution conflicts with HPA's general cytoplasmic IHC profile and approved cytosolic ICC-IF localisation (HPA tissue IHC; HPA subcellular ICC-IF). Check controls and detection conditions before assigning it to MAST2 (general IHC practice). |
| Prominent staining of adipocytes or ovarian stroma cells (HPA tissue IHC). | HPA reports these cell types as not detected; unexpected signal may reflect cross-reactivity or endogenous detection activity (HPA tissue IHC; general IHC practice). Compare a no-primary control and assess the precise cell type stained (general IHC practice). |
| Diffuse colour across cells and tissue spaces, without a clear cytoplasmic pattern (HPA tissue IHC). | A distribution that obscures cell boundaries is difficult to reconcile with HPA's cytoplasmic profile (HPA tissue IHC). Background from detection reagents or inadequate washing is possible; inspect controls before scoring (general IHC practice). |
| No signal in bronchial respiratory epithelium or cerebellar Purkinje cells (HPA tissue IHC). | HPA reports medium staining in these cells, so an absent signal warrants a technical check, but one section does not establish loss of MAST2 (HPA tissue IHC; general IHC practice). Review tissue integrity, antibody use, retrieval, and detection controls (general IHC practice). |
| Tissue evidence and confidence (HPA tissue IHC) | HPA lists several medium-positive cell types, but its Approved tissue profile has low consistency with RNA expression (HPA tissue IHC). Use the protein staining observations as a guide, with controls, rather than converting RNA abundance into an IHC intensity prediction (general IHC practice). |
| Membrane proximity (UniProt Q6P0Q8 localisation and topology) | MAST2 is cytoplasmic and cytoskeletal and can be recruited beneath the membrane through CDHR2 interaction; it has no transmembrane segment (UniProt Q6P0Q8). A limited peripheral component can fit this biology, while a membrane-only pattern needs independent support (UniProt Q6P0Q8; general IHC practice). |
| Antibody and isoform coverage (HPA antibodies; UniProt Q6P0Q8 isoforms) | HPA lists HPA039722 and HPA040155 as IHC Approved, while UniProt lists two isoforms (HPA antibodies; UniProt Q6P0Q8). No epitope or isoform coverage is supplied here, so staining differences cannot be assigned to a particular isoform from this record alone. |
| IF/ICC Q&A: where should signal appear? (HPA subcellular ICC-IF) | In ICC-IF, HPA reports approved cytosolic localisation; images are listed for A-431, U-251MG, and U2OS (HPA subcellular ICC-IF). HPA039722 has Uncertain ICC validation, so its IHC Approved status does not establish dependable ICC performance (HPA antibodies). |
| Situation | Likely cause | Next action |
|---|---|---|
| Cytoplasmic staining is weak in an HPA medium-positive cell type (HPA tissue IHC). | Low signal may reflect assay conditions or biological variation; HPA's low antibody–RNA consistency limits confidence in any single expected intensity (HPA tissue IHC; general IHC practice). | Check tissue integrity and detection controls, then review the catalog antibody's IHC-P conditions and optimise retrieval or antibody concentration within that protocol (general IHC practice). |
| Nuclei dominate while cytoplasm is faint (HPA tissue IHC; HPA subcellular ICC-IF). | The pattern conflicts with reported cytoplasmic and cytosolic localisation; nonspecific staining or detection background is possible (HPA tissue IHC; HPA subcellular ICC-IF; general IHC practice). | Inspect the no-primary control, reassess antibody concentration and washing, and compare with the expected cytoplasmic cells on the same slide (general IHC practice; HPA tissue IHC). |
| Adipocytes or ovarian stroma appear strongly positive (HPA tissue IHC). | Both are recorded as not detected; cross-reactivity or endogenous detection activity may produce misleading colour (HPA tissue IHC; general IHC practice). | Verify cell identity and examine a no-primary control; review endogenous enzyme blocking if using an enzyme-based chromogenic detection system (general IHC practice). |
| Colour is diffuse across the section (HPA tissue IHC). | Diffuse deposit can obscure the general cytoplasmic profile and may arise from background in the staining workflow (HPA tissue IHC; general IHC practice). | Compare no-primary and tissue controls, inspect wash steps and detection reagent background, then score only cells with interpretable localisation (general IHC practice). |
| All cells, including an HPA medium-positive reference cell type, are unstained (HPA tissue IHC). | A failed staining run is possible, although HPA's Approved rating with low RNA consistency means an individual specimen is not a guaranteed positive control (HPA tissue IHC; general IHC practice). | Confirm the reference cells are present, check reagent and detection performance with a working control, and review the catalog antibody's IHC-P protocol (general IHC practice). |
| A peripheral rim appears beside otherwise cytoplasmic staining (UniProt Q6P0Q8 localisation). | CDHR2-dependent recruitment can place MAST2 beneath the membrane, but UniProt reports no transmembrane segment (UniProt Q6P0Q8 localisation and topology). | Check whether cytoplasmic signal remains in the relevant cells and whether controls are clean; describe a peripheral component without calling MAST2 a transmembrane marker (UniProt Q6P0Q8; general IHC practice). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Approved — Low consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adrenal gland | Glandular cells | Medium | Protein (IHC) | HPA → |
| Appendix | Glandular cells | Medium | Protein (IHC) | HPA → |
| Bronchus | Respiratory epithelial cells | Medium | Protein (IHC) | HPA → |
| Caudate | Neuronal cells | Medium | Protein (IHC) | HPA → |
| Cerebellum | Purkinje cells | Medium | Protein (IHC) | HPA → |
Troubleshoot MAST2 staining in paraffin sections by checking retrieval, cellular pattern, controls and scoring before interpreting differences between samples.
A07003-2 has an IHC image from paraffin-embedded human lung cancer (catalog image caption). IF is listed as an application, and human and mouse are listed as reactive species (catalog applications and reactivity).
A07003-2 has an IHC image from paraffin-embedded human lung cancer (catalog image caption). IF is listed for A07003-2, but no IF image is supplied; human and mouse are listed as reactive species (catalog applications and reactivity).
Which to pick: Choose A07003-2 for paraffin-section IHC because its own image documents that preparation in human lung cancer; the fixative is unreported (catalog image caption). For IF/ICC, A07003-2 lists IF, though the payload supplies no IF image or ICC validation (catalog applications and image alts). A07003-2 is polyclonal and lists human and mouse reactivity, but its IHC image documents human tissue only (catalog dilution_raw, reactivity, and image caption).