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- Table of Contents
Plan PPP1R8 staining in paraffin sections around its widespread nuclear tissue pattern (HPA tissue IHC). The catalog antibody has an IHC working range of 2–5 μg/ml (datasheet A05396-2); compare nuclear staining across cells under consistent fixation.
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Nuclear in tissue (HPA tissue IHC); cytoplasm also annotated (UniProt) | |
| Staining pattern | Nuclei across diverse tissue cell types (HPA tissue IHC) | |
| Antigen retrieval | EDTA pH 8.0 HIER, heat-mediated (datasheet A05396-2) | |
| Positive control | Adrenal gland+4 more · see all | |
| Negative control | None in HPA (detected in all 45 tissues); use no-primary + isotype controls |
| Fixation | Matched tissue-IHC evidence does not establish the fixation claim. Validate the specimen-specific method before use. (selected-SKU IHC image A05396-2) | |
| Caveat | Cell-type-dependent isoform ratios complicate comparisons (UniProt) | |
| Regulation | Heart and skeletal muscle highest; kidney lower (UniProt) | |
| Isoform / epitope | 3 isoforms; antibody epitope coverage is unknown (UniProt) |
The catalog antibody protocol is paired with one published mouse testis paraffin-section method (PMC5645368: Methods).
| Sample | Paraffin-embedded human pancreas cancer tissue; fixative not specified (datasheet A05396-2) |
| Fixation | Image fixative and duration unreported (datasheet A05396-2); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: EDTA pH 8.0 (datasheet A05396-2); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A05396-2) |
| Primary antibody | Rabbit anti-PPP1R8, 2-5 μg/ml (datasheet A05396-2) |
| Primary incubation | Overnight at 4 °C (datasheet A05396-2) |
| Detection | HRP-conjugated secondary, DAB chromogen (datasheet A05396-2) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | PPP1R8-positive staining in glandular cells of adrenal gland (HPA tissue IHC: High). HPA tissue profile: Ubiquitous nuclear expression. No signal in the no-primary control. |
PPP1R8 should stain nuclei across many cell types, including glandular, hematopoietic, respiratory epithelial, neuronal and glial cells (HPA: ubiquitous nuclear expression; High staining in listed cells). HPA rates the tissue IHC profile Enhanced, with high consistency between antibody staining and RNA expression (HPA: tissue IHC reliability). Nuclear signal is the main expectation, although some cytoplasmic localization is possible (UniProt Q12972: primarily, but not exclusively, nuclear). PPP1R8 has no transmembrane segment (UniProt Q12972: topology).
| Nuclear chromogen is clear in breast glandular cells and bone marrow hematopoietic cells. | This matches two reported High-staining populations (HPA: breast glandular cells; bone marrow hematopoietic cells). Judge signal against the counterstained nuclei (standard IHC practice). |
| Cytoplasmic staining dominates while nuclei remain pale. | This conflicts with the expected predominant nuclear pattern (HPA: ubiquitous nuclear expression; UniProt Q12972: primarily nuclear). Some cytoplasmic signal is possible, so assess its strength relative to nuclei before calling the pattern aberrant (UniProt Q12972: cytoplasm). |
| Strong staining appears mainly in an unexpected cell population rather than the expected nuclei. | Cross-reactivity or endogenous detection activity is possible (standard IHC practice). PPP1R8 is widely expressed, so staining in an unlisted cell type alone cannot prove an artefact (HPA: ubiquitous nuclear expression; UniProt Q12972: ubiquitous expression). |
| Chromogen is diffuse across tissue and obscures nuclear boundaries. | The result cannot establish nuclear localization (standard IHC practice). Compare a no-primary control and assess blocking, detection background and antibody concentration (standard IHC practice). |
| Nuclei are unstained in adrenal gland glandular cells or bronchial respiratory epithelium. | These are reported High-staining populations, making the negative result worth investigating (HPA: adrenal gland glandular cells; bronchus respiratory epithelial cells). Check controls and assay conditions before interpreting it as absent PPP1R8 (standard IHC practice). |
| Expected compartment | Nuclear staining is the main tissue IHC pattern (HPA: ubiquitous nuclear expression). UniProt also lists cytoplasm, so a minor cytoplasmic component need not invalidate clear nuclear staining (UniProt Q12972: subcellular location). |
| Choice of positive tissue | Adrenal gland, appendix and breast glandular cells; bone marrow hematopoietic cells; and bronchial respiratory epithelial cells have High staining (HPA: tissue IHC). These provide documented populations for assessing nuclear signal. |
| Isoform composition | PPP1R8 has Alpha, Beta and Gamma isoforms, with cell-type-dependent ratios (UniProt Q12972: isoforms; tissue specificity). The supplied evidence gives no antibody epitope map, so it cannot predict isoform-specific IHC staining. |
| Protein topology and processing | PPP1R8 has no transmembrane segment, signal peptide or propeptide, and its annotated chain spans residues 1–351 (UniProt Q12972: topology; processing). The supplied evidence gives no basis for a membrane or shed-protein pattern. |
| Antibody validation | HPA027406, HPA027417 and HPA027452 each have Enhanced IHC status (HPA: antibody validation). That supports the reported pattern, but slide-specific background and detection controls remain necessary (standard IHC practice). |
| IF/ICC Q: What pattern should be expected? | A: Nuclear speckles are the main location, with additional nucleoplasmic signal (HPA: subcellular ICC-IF, enhanced). This finer IF pattern should not be required to call chromogenic tissue IHC positive (standard IHC practice). |
| Situation | Likely cause | Next action |
|---|---|---|
| High-staining reference tissue shows no nuclear signal. | An assay or reagent failure is possible; HPA reports High staining in the selected reference cells (HPA: tissue IHC; standard IHC practice). | Confirm the reference cell type, primary-antibody application and detection controls; then review retrieval and dilution against the antibody's IHC-P instructions (standard IHC practice). |
| Nuclear staining is weak but background is also low. | The assay may be under-sensitive, or the examined field may contain fewer of the reported High-staining cells (standard IHC practice; HPA: tissue IHC). | Recheck tissue morphology and the documented positive population; assess retrieval, antibody dilution and detection with a positive control (standard IHC practice). |
| Cytoplasm stains more strongly than nuclei. | The balance departs from the predominant nuclear expectation, although UniProt allows some cytoplasmic localization (HPA: tissue IHC profile; UniProt Q12972: subcellular location). | Compare an HPA-documented High-staining cell population and a no-primary control; reassess antibody dilution and detection background (standard IHC practice). |
| Unrelated cells or acellular areas carry prominent chromogen. | Off-target binding or endogenous detection activity may contribute; the appearance alone cannot distinguish them (standard IHC practice). | Inspect no-primary and detection controls, apply the relevant endogenous-activity block, and reassess whether signal follows nuclei (standard IHC practice). |
| Diffuse background makes nuclear scoring uncertain. | Excess reagent signal or insufficient blocking can obscure compartment boundaries (standard IHC practice). | Review blocking, washing and antibody dilution; use the nuclear counterstain to judge whether discrete nuclei remain readable (standard IHC practice). |
| A previously unlisted cell type stains clearly. | The HPA list is a set of reported High-staining populations, while the overall profile is ubiquitous nuclear expression (HPA: tissue IHC). | Assess nuclear localization and controls before assigning specificity; the supplied HPA record provides no negative cell population for exclusion (HPA: tissue IHC; standard IHC practice). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Enhanced — High consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adrenal gland | Glandular cells | High | Protein (IHC) | HPA → |
| Appendix | Glandular cells | High | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | High | Protein (IHC) | HPA → |
| Breast | Glandular cells | High | Protein (IHC) | HPA → |
| Bronchus | Respiratory epithelial cells | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| None in HPA: PPP1R8 is detected in all 45 scored tissues. Use a no-primary (secondary-only) and an isotype control instead. | ||||
Use nuclear staining as the main readout for PPP1R8 in paraffin section IHC, while checking retrieval, controls and cell level scoring (HPA tissue IHC; UniProt Q12972).
The catalog antibody has IHC data from human paraffin-embedded pancreatic cancer tissue and IF data from human pancreatic cancer tissue and HeLa cells (catalog image captions).
A05396-2 has IHC data from paraffin-embedded human pancreatic cancer tissue (IHC image caption). A05396-2 also has IF data from human pancreatic cancer tissue and HeLa cells (IF image captions).
Which to pick: Choose A05396-2 for tissue IHC: its own image shows staining of a paraffin-embedded human pancreatic cancer section after heat retrieval in EDTA, pH 8.0 (IHC image caption); the fixative is unreported (IHC image caption). Choose the same SKU for IF/ICC based on its IF images of HeLa cells and paraffin-embedded human pancreatic cancer tissue (IF image captions). For mouse or rat samples, A05396-2 lists reactivity with both species, but the supplied IHC and IF images show human samples only (catalog reactivity; image captions).