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- Table of Contents
Plan chromogenic RMI2 IHC in paraffin sections with the catalog antibody at 0.5–1 μg/mL (datasheet A08685). Use tonsil germinal center cells as a high-staining control and interpret nuclear and cytoplasmic staining with the reported uncertainty in mind (HPA tissue IHC).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Nuclear (UniProt); nuclear and cytoplasmic tissue staining (HPA tissue IHC) | |
| Staining pattern | Nuclear and cytoplasmic staining in several tissues (HPA tissue IHC) | |
| Antigen retrieval | Citrate pH 6 HIER, heat-mediated (datasheet A08685) | |
| Positive control | Placenta+4 more · see all | |
| Negative control | None in HPA (detected in all 45 tissues); use no-primary + isotype controls |
| Fixation | Keep fixation consistent across tissue sections (standard IHC practice; not target-specific) | |
| Caveat | Tissue staining reliability is uncertain (HPA tissue IHC) | |
| Regulation | Lymphoid tissue-enhanced RNA (HPA tissue RNA) | |
| Isoform / epitope | 2 isoforms; epitope differences unspecified (UniProt) |
The catalog antibody’s IHC-P protocol (datasheet A08685) is accompanied by three published RMI2 IHC protocols (PMC8516379; PMC10594864; PMC10134310).
| Sample | Paraffin-embedded human intestinal cancer tissue; fixative not specified (datasheet A08685) |
| Fixation | Image fixative and duration unreported (datasheet A08685); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: Citrate pH 6, 20 min (datasheet A08685) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A08685) |
| Primary antibody | Rabbit anti-RMI2, 0.5-1μg/ml (datasheet A08685) |
| Primary incubation | Overnight at 4 °C (datasheet A08685) |
| Detection | Streptavidin-biotin complex (SABC), DAB chromogen (datasheet A08685) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | RMI2-positive staining in trophoblastic cells of placenta (HPA tissue IHC: High). HPA tissue profile: Cytoplasmic and nuclear expression in several tissues. No signal in the no-primary control. |
RMI2 is a nuclear protein that colocalizes with BLM at DNA repair foci and has no transmembrane segment (UniProt Q96E14). In paraffin section IHC, expect nuclear staining, particularly in placental trophoblastic cells and tonsillar germinal center cells, where HPA reports high staining (HPA tissue IHC). HPA also reports cytoplasmic staining in several tissues, but rates its tissue IHC profile Uncertain, pending external verification (HPA tissue IHC).
| Nuclear stain in placental trophoblastic cells or tonsillar germinal center cells. | This fits the expected compartment and HPA's high staining in those cells (UniProt Q96E14; HPA tissue IHC). Score the specified cells and compartment separately; a positive area alone does not establish that every stained structure represents RMI2 (standard IHC practice). |
| Predominantly cytoplasmic stain, with little or no nuclear stain. | Treat this as equivocal: HPA reports cytoplasmic and nuclear tissue staining, while UniProt places RMI2 in the nucleus (HPA tissue IHC; UniProt Q96E14). Review cell morphology and controls before assigning a cytoplasmic result; HPA rates its tissue IHC profile Uncertain (HPA tissue IHC). |
| Strong stain in cells outside the expected cell population, without corresponding stain in the expected cells. | Possible explanations include cross-reactivity or endogenous chromogenic detection activity (standard IHC practice). Compare cell identity and distribution with the reported high trophoblastic and germinal center staining; the HPA tissue profile remains Uncertain (HPA tissue IHC). |
| Diffuse stain across nuclei, cytoplasm, and tissue spaces. | A widespread haze does not resolve the nuclear distribution reported for RMI2 (UniProt Q96E14). Review blocking, antibody concentration, detection background, and wash steps using slide controls (standard IHC practice); diffuse staining alone cannot establish target specificity. |
| No stain in placental trophoblastic cells or tonsillar germinal center cells. | These are HPA's high staining cell populations, so their absence calls for a run and specimen review (HPA tissue IHC). Check tissue preservation, retrieval conditions, antibody and detection controls, and counterstain before interpreting a negative result (standard IHC practice). |
| Tissue and cell selection | Placental trophoblastic cells and tonsillar germinal center cells are the strongest supplied IHC examples; adrenal glandular and bone marrow hematopoietic cells are Medium (HPA tissue IHC). Select and score the named cell population, since tissue labels alone do not identify the stained cells (standard IHC practice). |
| Low staining comparators | HPA lists oral squamous epithelium, salivary glandular cells, cardiomyocytes, fibroblasts, and adipocytes as Low; it lists no negative population (HPA tissue IHC). Low staining can provide context, but it is not a validated absence control (standard IHC practice). |
| Protein location and forms | RMI2 is nuclear, has no transmembrane segment, and has two listed isoforms (UniProt Q96E14). UniProt lists no signal peptide or propeptide and a chain spanning residues 2–147 (UniProt Q96E14). These annotations do not identify an antibody epitope or predict isoform-specific staining. |
| Antibody evidence | The listed antibody, HPA040995, is rated Uncertain for IHC and Supported for ICC (HPA antibodies). HPA rates the overall tissue IHC profile Uncertain because staining and RNA expression show medium consistency; external verification is pending (HPA tissue IHC). Interpret compartment and cell specificity with that limit in mind. |
| IF/ICC: What pattern should be expected? | HPA places the main ICC-IF signal in nuclear speckles (Supported) and an additional cytosolic signal at Uncertain confidence; its image cell lines are A-431, U-251MG, and U2OS (HPA subcellular). This is an IF interpretation cue, not a paraffin IHC protocol or proof that cytosolic IHC staining is specific. |
| Situation | Likely cause | Next action |
|---|---|---|
| The high staining reference cells are blank. | A run or specimen problem may obscure staining; HPA's high examples are trophoblastic and germinal center cells (HPA tissue IHC). | Check tissue identity and morphology, a run control, retrieval record, primary antibody step, and chromogenic detection reagents before scoring the slide negative (standard IHC practice). |
| The stain is cytoplasmic only. | HPA describes some cytoplasmic tissue staining, but UniProt assigns RMI2 to the nucleus; HPA tissue IHC is Uncertain (HPA tissue IHC; UniProt Q96E14). | Score nuclear and cytoplasmic signal separately, inspect the high staining cell populations, and compare a no-primary control before attributing cytoplasmic color to RMI2 (standard IHC practice). |
| Color appears in unexpected cells or persists without primary antibody. | Cross-reactivity is possible in unexpected cells; color without primary antibody suggests endogenous detection activity or reagent background (standard IHC practice). | Use the no-primary control to assess detection background; review blocking and the chromogenic detection system, then reassess the named HPA cell populations (standard IHC practice; HPA tissue IHC). |
| The slide has uniform haze or obscured nuclei. | Excess background can prevent a compartment call (standard IHC practice). | Review antibody concentration, blocking, wash steps, and counterstain; require readable cell boundaries and nuclei before scoring localization (standard IHC practice). |
| Low staining tissue is completely blank. | HPA calls the listed comparator cell populations Low, and supplies no negative population; a blank result there alone cannot validate the run (HPA tissue IHC). | Evaluate a high staining example in its specified cells alongside the low staining tissue, then check the run control if the expected high cells are also blank (HPA tissue IHC; standard IHC practice). |
| IHC and IF images show different secondary compartments. | HPA reports cytoplasmic tissue IHC and an Uncertain additional cytosolic ICC-IF location, while nuclear speckles are Supported in ICC-IF (HPA tissue IHC; HPA subcellular). | Report each assay and compartment separately with its HPA confidence level; avoid treating the IF cytosolic observation as validation of cytoplasmic paraffin IHC staining (HPA tissue IHC; HPA subcellular). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Uncertain — Medium consistency between antibody staining and RNA expression data. Pending external verification.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Placenta | Trophoblastic cells | High | Protein (IHC) | HPA → |
| Tonsil | Germinal center cells | High | Protein (IHC) | HPA → |
| Adrenal gland | Glandular cells | Medium | Protein (IHC) | HPA → |
| Appendix | Glandular cells | Medium | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | Medium | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| None in HPA: RMI2 is detected in all 45 scored tissues. Use a no-primary (secondary-only) and an isotype control instead. | ||||
Troubleshoot RMI2 staining in paraffin sections by checking retrieval, controls, cellular localisation and how staining is scored.
A08685 has IHC images of paraffin sections from human intestinal cancer, human mammary cancer and rat liver (A08685 image captions). Its listed reactivity is human, mouse and rat (catalog: reactivity).
A08685 will render with its own human intestinal cancer paraffin-section IHC image (A08685 card image caption). Additional captions show human mammary cancer and rat liver paraffin sections (A08685 image captions).
Which to pick: Choose A08685 for paraffin-section IHC based on its human and rat tissue images; the fixative is unreported (A08685 image captions). For IF/ICC, A08685 lists ICC and IHC-F, but supplies no IF image (catalog: applications; IF image alts). For cross-species work, its listed reactivity covers human, mouse and rat, with IHC images shown for human and rat only (catalog: reactivity; A08685 image captions).