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- Table of Contents
Plan chromogenic ARHGAP18 IHC in paraffin sections around the predominantly cytoplasmic tissue pattern (HPA tissue IHC). The IHC-validated antibody has a starting dilution range of 1:100–1:300 (datasheet: A08418).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Cytoplasmic; membranous in a few tissues (HPA tissue IHC) | |
| Staining pattern | General cytoplasmic staining with some membranous staining (HPA tissue IHC) | |
| Antigen retrieval | Citrate pH 6.0 HIER, 95–98 °C, 20 min (rule: cytoplasmic / membrane antigen) | |
| Positive control | Adrenal gland+4 more · see all | |
| Negative control | Adipose tissue+4 more · see all |
| Fixation | Keep formalin fixation consistent between sections. (standard IHC practice; not target-specific) | |
| Caveat | Staining varies by cell type; adipocytes are undetected (HPA tissue IHC) | |
| Regulation | No expression regulator annotated (UniProt) | |
| Isoform / epitope | 2 isoforms; no ectodomain; isoform epitopes unknown (UniProt) |
The catalog antibody’s IHC-P protocol is paired with published ARHGAP18 protocols for human breast carcinoma (PMC5674094) and neuroendocrine tumor tissue (PMC3485222).
| Sample | Paraffin-embedded human brain tissue; fixative not specified (datasheet A08418) |
| Fixation | Image fixative and duration unreported (datasheet A08418); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat-induced epitope retrieval in citrate buffer, pH 6.0, 20 min at 95–98 °C (standard rule: cytoplasmic / membrane antigen) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% normal serum of the secondary host, 30 min, room temperature (standard) |
| Primary antibody | Rabbit anti-ARHGAP18, 1:100-1:300 (datasheet A08418) |
| Primary incubation | Overnight at 4 °C (standard) |
| Detection | HRP-polymer secondary, DAB chromogen 5–10 min (standard) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | ARHGAP18-positive staining in glandular cells of adrenal gland (HPA tissue IHC: High). HPA tissue profile: General cytoplasmic expression with additional membranous expression in a few tissues. No signal in the no-primary control. |
ARHGAP18 is cytoplasmic and has no transmembrane segment (UniProt Q8N392). Expect predominantly cytoplasmic staining, with some membranous staining in a few tissues (HPA tissue IHC). High staining is reported in selected glandular, basal, ciliated and exocrine glandular cells (HPA tissue IHC). Treat the pattern as a guide: HPA rates its tissue IHC data Approved, with medium agreement between staining and RNA expression, pending external verification (HPA tissue IHC).
| Strong cytoplasmic staining in pancreatic exocrine glandular cells or bronchial basal cells. | This fits two reported high-staining cell populations (HPA tissue IHC) and the cytoplasmic location (UniProt Q8N392). Judge the signal in the named cells rather than treating every cell in the section as an expected positive. |
| Some cell-edge staining accompanies a predominantly cytoplasmic pattern. | Additional membranous expression occurs in a few tissues (HPA tissue IHC). A cell-edge signal can therefore be compatible with the reported pattern, but the payload does not identify which tissues should show it (HPA tissue IHC); assess it alongside the cytoplasmic signal. |
| Nuclear staining dominates the section, with little cytoplasmic signal. | That is discordant with cytoplasmic localization (UniProt Q8N392) and mainly cytosolic localization in ICC-IF (HPA subcellular). Nuclear speckles are an uncertain additional ICC-IF location (HPA subcellular), so they do not establish dominant nuclear staining as an expected IHC result. |
| Strong staining appears in adipocytes or parathyroid glandular cells. | Both are reported as not detected (HPA tissue IHC). Consider antibody cross-reactivity or endogenous detection activity (standard IHC practice), especially if the signal persists where the primary antibody is omitted. A negative reference is a comparison, not proof of specificity by itself. |
| The whole section has diffuse colour, or a known-positive cell population has no visible signal. | Diffuse colour that obscures cell boundaries limits compartment scoring; background from detection reagents or inadequate blocking is possible (standard IHC practice). No signal in pancreatic exocrine glandular cells, reported high by HPA, calls for a run-level check before interpreting a test section as negative (HPA tissue IHC; standard IHC practice). |
| Choice of reference cells | Pancreatic exocrine glandular cells and bronchial basal cells are high-staining references; adipocytes and parathyroid glandular cells are reported not detected (HPA tissue IHC). Score those cell populations specifically: a mixed tissue cannot be assigned one expected intensity from these entries. |
| Compartment used for scoring | Cytoplasm is the annotated location (UniProt Q8N392), and cytosol is the supported main ICC-IF location (HPA subcellular). Nuclear speckles and plasma membrane are uncertain additional ICC-IF locations (HPA subcellular); IHC reports additional membranous expression in a few tissues (HPA tissue IHC). |
| Strength of the reference evidence | The tissue pattern is Approved, with medium consistency between antibody staining and RNA data and external verification pending (HPA tissue IHC). HPA031595 is Approved for IHC and Supported for ICC (HPA antibodies); these labels guide interpretation without establishing specificity in every specimen. |
| Isoforms and antibody coverage | UniProt lists two ARHGAP18 isoforms (UniProt Q8N392). No antibody epitope or isoform-specific staining result is supplied, so these records cannot establish whether HPA031595 detects both isoforms (UniProt Q8N392; HPA antibodies). |
| Detection chemistry | Endogenous activity or residual detection-reagent background can create chromogenic colour without target binding (standard IHC practice). A primary-omission control helps identify that contribution, while a matched positive reference helps assess whether the staining run worked (standard IHC practice). |
| Situation | Likely cause | Next action |
|---|---|---|
| Expected high-staining reference cells have no signal. | The staining run or detection step may have failed (standard IHC practice); pancreatic exocrine glandular cells are reported high (HPA tissue IHC). | Check the positive reference and detection controls, then review the IHC-validated antibody's stated IHC-P workflow (standard IHC practice). Avoid calling test sections negative until the reference works. |
| Dominant nuclear colour appears across cells. | The pattern conflicts with cytoplasmic localization (UniProt Q8N392). An uncertain nuclear-speckle observation from ICC-IF does not establish this IHC pattern (HPA subcellular). | Compare the nuclear colour with a primary-omission control and inspect whether a distinct cytoplasmic signal remains (standard IHC practice). |
| Strong colour appears in adipocytes or parathyroid glandular cells. | Those cells are reported not detected (HPA tissue IHC); cross-reactivity or endogenous detection activity is possible (standard IHC practice). | Compare the same cell populations with primary-omission and positive-reference sections (standard IHC practice). Interpret persistent unexpected colour cautiously. |
| Diffuse colour obscures cell boundaries. | Detection background or insufficient blocking may prevent reliable localization (standard IHC practice). | Inspect the primary-omission control; review blocking, washing and detection steps before scoring cytoplasmic staining (standard IHC practice). |
| Only a cell-edge signal is visible. | Some membranous expression is reported, but the expected dominant location is cytoplasmic (HPA tissue IHC; UniProt Q8N392). | Check for cytoplasmic signal in a high-staining reference cell population and compare edge staining with the primary-omission control (HPA tissue IHC; standard IHC practice). |
| IF/ICC shows nuclear speckles or plasma-membrane signal. | Both are uncertain additional locations; cytosol is the supported main ICC-IF location (HPA subcellular). | Interpret them as secondary observations and compare with the cytosolic signal and appropriate imaging controls (HPA subcellular; standard IF practice). Use the separate IF/ICC guide for its workflow. |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Approved — Medium consistency between antibody staining and RNA expression data. Pending external verification.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adrenal gland | Glandular cells | High | Protein (IHC) | HPA → |
| Bronchus | Basal cells | High | Protein (IHC) | HPA → |
| Cervix | Glandular cells | High | Protein (IHC) | HPA → |
| Duodenum | Glandular cells | High | Protein (IHC) | HPA → |
| Epididymis | Glandular cells | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Cerebellum | Cells in granular layer | Not detected | Protein (IHC) | HPA → |
| Hippocampus | Glial cells | Not detected | Protein (IHC) | HPA → |
| Liver | Cholangiocytes | Not detected | Protein (IHC) | HPA → |
| Ovary | Ovarian stroma cells | Not detected | Protein (IHC) | HPA → |
Troubleshoot ARHGAP18 staining in paraffin sections by checking retrieval, cellular distribution, antibody specificity, and cell type before scoring chromogenic signal.
ARHGAP18 antibodies include paraffin-section IHC in human brain (A08418 image caption) and IF/ICC in 3T3 cells (A08418-1 image captions); listed reactivity spans human, mouse and rat (catalog).
A08418 lists IHC and IF for human and mouse (catalog: applications/reactivity), with an IHC image of paraffin-embedded human brain (A08418 image caption). A08418-1 lists IF and ICC for human, mouse and rat (catalog: applications/reactivity), with both images showing 3T3 cells (A08418-1 image captions).
Which to pick: Choose A08418 for tissue IHC because IHC is listed and its image shows paraffin-embedded human brain (A08418: applications/image caption); the caption does not report the fixative (A08418 image caption). Choose A08418-1 for IF/ICC in 3T3 cells because both images use those cells (A08418-1 image captions). A08418-1 also lists rat reactivity, while A08418 lists human and mouse; neither entry reports a clone, so clonality cannot guide selection (catalog: reactivity/clone).