ARPC2 / Actin-related protein 2/3 complex subunit 2 · Western blot design guide

Design a Western Blot for ARPC2

Source-linked ARPC2 Western blot protocol options, expected-band and isoform facts, troubleshooting for weak or shifted signal, and recommended anti-ARPC2 WB antibodies. Everything you need to plan the experiment before you commit precious samples.

Evidence assembled September 2026 · For research use; verify linked source records and product datasheet before use
Western blot protocol sheet for ARPC2: expected band ~34.3 kDa, hero antibody M06165, catalog values and labelled standard workflow; separate PMC comparisons on the guide
Printable ARPC2 Western blot protocol sheet — expected band ~34.3 kDa, antibody M06165, controls and PMC citations. Open the full ARPC2 WB guide →

ARPC2 Western Blot Experimental Design Guide

Expected bands, source-linked protocol options, controls and antibodies — the at-a-glance facts below, then the full design guide.

Must know before running
Expected band ~34.3 kDa
Observed band ~34 kDa
Gel 10% (catalog M06165)
Positive control ⓘ Appendix (IHC candidate; verify WB) +4 more
Negative control ⓘ Suggested KO / knockdown lysate
Important caveats
Reasons your observed band may differ from the expected size.
PTM Acetylated
Caveat Modification-state controls
Gene-set association MSigDB Hallmark membership
Isoform 1 isoform(s)
Section 1

Source-Linked ARPC2 Western Blot Protocol Options

The M06165 protocol combines labelled catalog values with standard starting conditions. Published comparisons retain their own sample, reagent and detection scope.

Recommended Western blot protocol parameters
Sample / lysatehuman 293T, human Hela, human Jurkat (catalog M06165)
Gel %10% (catalog M06165)
Load30 ug; reducing conditions (catalog M06165)
Transfera nitrocellulose membrane at 150 mA for 50-90 minutes (catalog M06165)
Membranenitrocellulose membrane (catalog M06165)
Blocking5% non-fat milk/TBS for 1.5 hour at RT (catalog M06165)
Primary antibodyM06165 · 1:500 (catalog M06165)
Primary incubationovernight at 4°C (catalog M06165)
Secondary antibodygoat anti-rabbit IgG-HRP, 1:5000 (catalog M06165)
Secondary incubation1.5 hour at RT (catalog M06165)
WashTBS-0.1%Tween 3 times with 5 minutes each (catalog M06165)
DetectionECL (catalog M06165)
Section 2

What Is the Expected ARPC2 Western Blot Band Size?

ARPC2 is predicted at 34.3 kDa and observed near 34 kDa; the small difference has no established cause in the supplied evidence.

What am I looking at on my blot?
Single band near 34 kDaConsistent with ARPC2, subject to band-identity controls
Faint band near 34 kDaMay reflect low ARPC2 signal
No band near 34 kDaARPC2 was not detected in this sample
Additional band away from 34 kDaIdentity is uncertain; no distinct ARPC2 band is established by the supplied features
💡Expected ARPC2 appearanceARPC2 has a predicted mass of 34.3 kDa and an empirical band near 34 kDa; confirm band identity with ordinary controls.
How each factor affects band size
Predicted molecular massPlaces the expected ARPC2 band near 34.3 kDa
Acetylation at Lys275A visible migration effect is not established
Acetylation at Lys295A visible migration effect is not established
Arp2/3 complex membershipDoes not establish a larger ARPC2 band on a denaturing blot
Why is my band missing or off?
SituationLikely causeNext action
Weak or no signalARPC2 may be below the detection limitCheck loading, transfer, antibody performance, and a positive-control lysate
Band higher than expectedThe supplied features do not establish a higher-migrating ARPC2 speciesCompare with a positive control and verify identity by ARPC2 depletion
Band lower than expectedThe supplied features do not establish a smaller ARPC2 productCheck sample integrity and verify identity by ARPC2 depletion
Multiple bandsOnly one isoform is listed; additional bands have uncertain identityCompare with a positive control and verify bands by ARPC2 depletion
Fragments below expected sizeSample degradation is possible; no ARPC2 cleavage product is listedPrepare fresh lysate with protease inhibitors and compare with a positive control

Sample controls for ARPC2 Western blot

🧪HPA-IHC candidate guidance (verify in WB): For positive controls for ARPC2 in Western blot, you can use appendix tissue lysate, which has high HPA expression.
Positive control: Appendix (IHC candidate; verify WB)
Negative control: Suggested KO / knockdown lysate
Loading controls: Run GAPDH, β-actin, and a total-protein stain alongside the samples.
⚠️Feasibility: The supplied HPA tissues all show some expression, so use siRNA knockdown or a KO line for a clear negative control.

HPA tissue expression evidence for ARPC2

Comprehensive Human Protein Atlas IHC scoring per tissue. Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.

Higher expression tissues · candidate positive controls from IHC

TissueCell typeLevelEvidenceSource
Appendix lymphoid tissue High Protein (IHC) HPA →
Bone marrow hematopoietic cells High Protein (IHC) HPA →
Caudate neuronal cells High Protein (IHC) HPA →
Cerebellum cells in granular layer High Protein (IHC) HPA →
Cerebral cortex neuronal cells High Protein (IHC) HPA →

Lower expression tissues · IHC evidence, not confirmed WB-negative controls

TissueCell typeLevelEvidenceSource
Liver cholangiocytes Low Protein (IHC) HPA →
Skeletal muscle myocytes Low Protein (IHC) HPA →
Adipose tissue adipocytes Medium Protein (IHC) HPA →
Adrenal gland glandular cells Medium Protein (IHC) HPA →
Breast glandular cells Medium Protein (IHC) HPA →
Section 3

Advanced ARPC2 Western Blot Tips

Deeper troubleshooting and optimisation questions for ARPC2, answered from its protein features.

How should ARPC2 band migration be interpreted?
Band shift · Use the separately labelled calculated mass and catalog-observed evidence above. A sequence annotation does not establish an observed migration shift. Verify target identity with orthogonal controls.
Do listed ARPC2 isoforms explain multiple bands?
Isoforms · Only one isoform is listed, with no alternative sequence supplied. The supplied features therefore do not support assigning additional bands to specific ARPC2 isoforms.
Could acetylation shift the ARPC2 band?
PTM · UniProt lists N6-acetyllysine at positions 275 and 295, using UniProt sequence numbering. These features alone do not establish a visible band shift. Check an observed shift independently before attributing it to acetylation.

No glycosylation sites are listed, and the glycosylation count is zero. The supplied features do not support glycosylation as an explanation for a heavier band.
Does this guide establish induction of ARPC2?
Induction · No general induction response is established by this guide. A pathway or gene-set association is not evidence of induction in a particular specimen. Verify the relevant treatment and control in a target-specific experiment.
How should transfer be checked for ARPC2?
Transfer · Standard workflow guidance: verify transfer efficiency for the intended target size before interpreting a weak signal. Use total-protein assessment and optimize transfer for the membrane, gel and apparatus; the labelled catalog values take precedence.
How should blocking be optimized?
Blocking · Standard workflow guidance: follow the M06165 datasheet where specified. Otherwise compare 5% milk or 5% BSA in TBST; for a phospho-specific assay start with BSA. Optimize background and specific signal with matched controls.
How should ARPC2 be quantified across fractions?
Quantitation · Because ARPC2 is listed in several cellular locations, compare like fractions when assessing changes in its band intensity. A difference between fractions may reflect distribution as well as total ARPC2 abundance.
How should the ARPC2 band compare with its predicted mass?
Interpretation · ARPC2 has a predicted mass of 34.3 kDa, close to the reported apparent band near 34 kDa. A small difference between calculated and apparent mass does not, by itself, establish a modification.

UniProt places ARPC2 in the cytoplasm and cytoskeleton, cell projections, synaptosomes, and nucleus. Consider which fraction was loaded when interpreting a weak or missing band.

Start with the expected band near 34 kDa. ARPC2 is a component of the Arp2/3 complex, but that association alone does not identify another band. The listed acetylation sites and single isoform also do not establish the identity of an unexpected band.
Boster reagents

ARPC2 Western Blot Antibodies

Catalog antibodies with Western blot application and product-specific WB images. Evaluate suitability with the reported sample, controls and experimental conditions.

Real WB data Western blot analysis of ARPC2 using anti-ARPC2 antibody (M06165). Electrophoresis was performed on a 10% SDS-PAGE gel at 80V (Stacking gel) / 120V (Resolving gel) for 2 hours. The sample well of each lane was loaded with 30 ug of sample under reducing conditions. Lane 1: human 293T whole cell lysates, Lane 2: human Hela whole cell lysates, Lane 3: human Jurkat whole cell lysates, Lane 4: human MCF-7 whole cell lysates, Lane 5: rat skeletal muscle tissue lysates, Lane 6: rat PC-12 whole cell lysates, Lane 7: mouse skeletal muscle tissue lysates, Lane 8: mouse NIH/3T3 whole cell lysates. After electrophoresis, proteins were transferred to a nitrocellulose membrane at 150 mA for 50-90 minutes. Blocked the membrane with 5% non-fat milk/TBS for 1.5 hour at RT. The membrane was incubated with rabbit anti-ARPC2 antigen affinity purified monoclonal antibody (M06165) at 1:500 overnight at 4°C, then washed with TBS-0.1%Tween 3 times with 5 minutes each and probed with a goat anti-rabbit IgG-HRP secondary antibody at a dilution of 1:5000 for 1.5 hour at RT. The signal is developed using an ECL Plus Western Blotting Substrate (Catalog # AR1196-200) with Tanon 5200 system. A specific band was detected for ARPC2 at approximately 34 kDa. The expected band size for ARPC2 is at 34 kDa.
Anti-ARPC2 Rabbit Monoclonal Antibody
Cat # M06165

The catalog reports one anti-ARPC2 WB antibody, rabbit monoclonal M06165, with reported human, mouse, and rat reactivity. Its WB image shows a band near the expected 34 kDa in the captioned lysates. No publication evidence is supplied.

Which to pick: M06165 is the only listed option and has a WB image. The caption documents human cell lines, rat skeletal muscle and PC-12, and mouse skeletal muscle and NIH/3T3, using 30 µg reduced lysate and a 1:500 primary antibody dilution.

Source: BosterBio ARPC2 gene-info card — filtered to Western-blot-capable antibodies; each card shows that product's actual WB validation figure.