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- Table of Contents
Plan chromogenic ARRB1 IHC in paraffin sections around the cytoplasmic and nuclear pattern reported in most tissues (HPA tissue IHC). Purkinje cells and nasopharyngeal goblet cells show high staining (HPA tissue IHC); GPCR stimulation can alter ARRB1 localisation (UniProt).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Cytoplasmic and nuclear staining in most tissues (HPA tissue IHC) | |
| Staining pattern | Most tissues show cytoplasmic and nuclear cell staining (HPA tissue IHC) | |
| Antigen retrieval | Tris-EDTA pH 9.0 HIER, 95–98 °C, 20 min (rule: nuclear antigen) | |
| Positive control | Cerebellum+4 more · see all | |
| Negative control | Adipose tissue+4 more · see all |
| Fixation | Keep fixation consistent across sections. (standard IHC practice; not target-specific) | |
| Caveat | GPCR stimulation can redistribute ARRB1 (UniProt) | |
| Regulation | Expression regulation is not annotated (UniProt) | |
| Isoform / epitope | 2 isoforms, 1A and 1B; check epitope coverage (UniProt) |
The catalog antibody’s IHC-P protocol is accompanied by two published ARRB1 IHC protocols (PMC7348167; PMC4194125).
| Sample | Paraffin-embedded human kidney tissue; fixative not specified (datasheet M02185) |
| Fixation | Image fixative and duration unreported (datasheet M02185); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat-induced epitope retrieval in Tris-EDTA buffer, pH 9.0, 20 min at 95–98 °C (standard rule: nuclear antigen) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% normal serum of the secondary host, 30 min, room temperature (standard) |
| Primary antibody | Rabbit monoclonal (clone CCB-1) anti-ARRB1, 1:50 (datasheet M02185) |
| Primary incubation | Overnight at 4 °C (standard) |
| Detection | HRP-polymer secondary, DAB chromogen 5–10 min (standard) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | ARRB1-positive staining in purkinje cells of cerebellum (HPA tissue IHC: High). HPA tissue profile: Cytoplasmic and nuclear expression in most tissues. No signal in the no-primary control. |
ARRB1 is a soluble protein with cytoplasmic and nuclear localization; it has no transmembrane segment (UniProt P49407 topology and subcellular location). In paraffin-section IHC, expect staining in many tissues, including Purkinje cells and nasopharyngeal goblet cells with reported high staining (HPA tissue IHC). HPA describes the overall pattern as cytoplasmic and nuclear and rates its tissue IHC profile Approved, pending external verification (HPA tissue IHC).
| Cytoplasmic and nuclear staining in Purkinje cells or nasopharyngeal goblet cells. | This matches the reported compartments and high staining in those cell types (HPA tissue IHC). Assess identifiable cells rather than treating every structure in the section as equally informative (general IHC practice). |
| Predominantly nuclear staining, with little visible cytoplasmic staining. | Nuclear staining can be plausible: UniProt places monomeric ARRB1 predominantly in the nucleus, and HPA reports nuclear tissue staining (UniProt P49407 subcellular location; HPA tissue IHC). An exclusively extracellular or structural pattern does not match those locations and merits an artefact check. |
| Strong staining in a cell population HPA lists as not detected, such as adipocytes. | The result conflicts with the reported staining for that specified cell type (HPA tissue IHC: adipocytes not detected). Consider cross-reactivity or endogenous detection activity; compare cellular morphology and detection-only controls before assigning ARRB1 positivity (general IHC practice). |
| Diffuse chromogen over cells and surrounding tissue, without clear cellular boundaries. | A widespread haze prevents reliable cytoplasmic or nuclear scoring (general IHC practice). Uneven blocking, detection background, or excess reagent can produce such staining; the HPA cellular pattern alone cannot identify which step caused it (HPA tissue IHC; general IHC practice). |
| No staining in a section containing identifiable Purkinje cells or nasopharyngeal goblet cells. | These are reported high-staining cell types, so their absence of signal prompts a technical review (HPA tissue IHC). Check tissue preservation, the IHC-validated antibody and detection controls; HPA's Approved profile remains pending external verification (HPA tissue IHC; general IHC practice). |
| Cell type and tissue context | HPA reports high staining in Purkinje cells and nasopharyngeal goblet cells, medium staining in several other named cell types, and no detected staining in some others (HPA tissue IHC). Score the specific cells present rather than labeling an entire tissue positive or negative. |
| Subcellular distribution | Cytoplasm and nucleus are both supported; UniProt also lists membrane-associated sites, coated pits and cytoplasmic vesicles, with recruitment linked to receptor stimulation (HPA tissue IHC; UniProt P49407 subcellular location). These annotations do not require visible membrane staining in every paraffin section. |
| IHC antibody evidence | HPA lists HPA070249 and CAB003763 as IHC Approved; its overall tissue profile is Approved, pending external verification (HPA antibodies; HPA tissue IHC). Approved is the supplied status; the payload does not assign either antibody IHC Enhanced validation. |
| Isoforms and epitope coverage | UniProt lists two isoforms, 1A and 1B (UniProt P49407 isoforms). The supplied sources do not map an IHC antibody epitope to either isoform, so an observed pattern cannot establish isoform-specific expression or antibody coverage. |
| Topology and processing | ARRB1 has no transmembrane segment or signal peptide and is annotated as a single chain spanning residues 1–418 (UniProt P49407 topology and processing). Interpret extracellular-only staining cautiously; these annotations do not establish a tissue-specific secretion or shedding pattern. |
| IF/ICC Q&A: Where is ARRB1 expected? | HPA supports nucleoplasmic localization and lists cytosol as an additional location in ICC-IF (HPA subcellular ICC-IF). This supports compartment interpretation for IF/ICC; it does not supply an IF/ICC protocol or make the paraffin-section IHC pattern identical. |
| Situation | Likely cause | Next action |
|---|---|---|
| No signal in a reported high-staining cell type. | A failed staining run or unsuitable detection conditions are possibilities; HPA reports high staining in Purkinje cells and nasopharyngeal goblet cells but does not diagnose a failed section (HPA tissue IHC; general IHC practice). | Verify that the expected cells are present, then review the antibody's IHC validation, reagent preparation, antigen retrieval and detection controls (HPA antibodies; general IHC practice). No ARRB1-specific retrieval condition is supplied. |
| Only extracellular matrix or luminal material appears strongly stained. | That distribution does not fit the supplied cellular localization or lack of a signal peptide (HPA tissue IHC; UniProt P49407 subcellular location and processing). Nonspecific chromogen deposition is a possible technical cause (general IHC practice). | Inspect cells at higher magnification and compare a detection-only control before scoring the deposit as ARRB1 (general IHC practice). |
| A HPA-listed not-detected cell type appears strongly positive. | Cross-reactivity or endogenous detection activity may explain a conflicting result, though a single section cannot distinguish them (HPA tissue IHC; general IHC practice). | Confirm cell identity and review appropriate primary-omission and detection controls; compare staining in a reported high-staining cell type in the same run (HPA tissue IHC; general IHC practice). |
| Chromogen obscures boundaries across the section. | Excess detection signal or inadequate background control may prevent compartment assessment (general IHC practice). HPA reports a cellular cytoplasmic and nuclear pattern, not uniform tissue-wide haze (HPA tissue IHC). | Review blocking, washes and detection exposure using the assay's controls, then score only where cells and compartments remain distinguishable (general IHC practice). |
| Nuclear signal is called an artefact solely because cytoplasmic signal is weak. | That rule conflicts with HPA's nuclear tissue pattern and UniProt's predominantly nuclear monomer annotation (HPA tissue IHC; UniProt P49407 subcellular location). | Reassess identifiable nuclei alongside cellular background and controls; report the observed compartments without inferring stimulation state or oligomeric form from IHC alone (general IHC practice; UniProt P49407 subcellular location). |
| Results differ between an IHC section and an IF/ICC image. | HPA reports cytoplasmic and nuclear tissue IHC, while its ICC-IF summary supports nucleoplasm with additional cytosol (HPA tissue IHC; HPA subcellular ICC-IF). The supplied evidence does not establish identical assay patterns. | Interpret each result against its own HPA application evidence and antibody validation status; investigate controls before treating the difference as a biological change (HPA antibodies; HPA subcellular ICC-IF; general IHC practice). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Approved — Pending external verification.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Cerebellum | Purkinje cells | High | Protein (IHC) | HPA → |
| Nasopharynx | Goblet cells | High | Protein (IHC) | HPA → |
| Appendix | Glandular cells | Medium | Protein (IHC) | HPA → |
| Breast | Glandular cells | Medium | Protein (IHC) | HPA → |
| Bronchus | Ciliated cells (cell body) | Medium | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | Not detected | Protein (IHC) | HPA → |
| Heart muscle | Cardiomyocytes | Not detected | Protein (IHC) | HPA → |
| Lymph node | Non-germinal center cells | Not detected | Protein (IHC) | HPA → |
| Parathyroid gland | Glandular cells | Not detected | Protein (IHC) | HPA → |
Troubleshoot ARRB1 staining in paraffin section chromogenic IHC using compartment patterns, tissue controls, and matched processing conditions.
Anti-ARRB1 antibodies have IHC images from paraffin-embedded human kidney (M02185 caption) and human mammary cancer tissue (PA2155 caption); both list human, mouse and rat reactivity (catalog). IF is listed for M02185 (catalog).
M02185 will render with a paraffin-embedded human kidney IHC image (M02185 caption); its applications include IHC and ICC/IF, with human, mouse and rat reactivity (catalog). PA2155 will render with a human mammary cancer tissue IHC(P) image (PA2155 caption); it lists IHC and human, mouse and rat reactivity (catalog).
Which to pick: For paraffin-section IHC, choose M02185 when its human kidney image is relevant (M02185 caption), or PA2155 when its human mammary cancer tissue image is relevant (PA2155 caption); neither caption reports the fixative. For IF/ICC, choose rabbit monoclonal M02185 because it lists both applications (M02185 catalog), though no IF image is supplied (catalog). For human, mouse or rat samples, either SKU lists reactivity (catalog); PA2155 has no IF/ICC listing (PA2155 catalog).