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- Table of Contents
Plan chromogenic ASGR1 IHC in paraffin sections with the catalog antibody (datasheet A05376-1). Use liver hepatocytes as a positive reference and assess their distinct cytoplasmic staining (HPA tissue IHC).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Hepatocyte cytoplasm (HPA tissue IHC); cell membrane (UniProt) | |
| Staining pattern | Distinct cytoplasmic staining in hepatocytes (HPA tissue IHC) | |
| Antigen retrieval | EDTA pH 8.0 HIER, heat-mediated (datasheet A05376-1) | |
| Positive control | Liver | |
| Negative control | Adipose tissue+4 more · see all |
| Fixation | Keep fixation consistent across sections (standard IHC practice; not target-specific) | |
| Caveat | A secreted variant may complicate tissue staining (HPA tissue IHC) | |
| Regulation | No specific expression regulator reported (UniProt) | |
| Isoform / epitope | 2 isoforms; map the epitope to extracellular or cytoplasmic regions (UniProt) |
The catalog antibody has an EDTA pH 8.0 IHC protocol (datasheet: A05376-1). Published paraffin-section examples cover mouse liver and humanized liver (PMC13491154; PMC10104468).
| Sample | Paraffin-embedded human liver cancer tissue; fixative not specified (datasheet A05376-1) |
| Fixation | Image fixative and duration unreported (datasheet A05376-1); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: EDTA pH 8.0 (datasheet A05376-1); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A05376-1) |
| Primary antibody | Rabbit anti-ASGR1, 1:50 recommended; image 1:100 (datasheet A05376-1) |
| Primary incubation | Overnight at 4 °C (datasheet A05376-1) |
| Detection | HRP-conjugated secondary, DAB chromogen (datasheet A05376-1) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | ASGR1-positive staining in hepatocytes of liver (HPA tissue IHC: High). HPA tissue profile: Distinct cytoplasmic expression in hepatocytes. No signal in the no-primary control. |
In paraffin-section IHC, expect strong cytoplasmic staining in hepatocytes (HPA: High in liver hepatocytes; distinct cytoplasmic expression). ASGR1 is a membrane receptor with a cytoplasmic segment at residues 1–40, a transmembrane segment at 41–61, and an extracellular segment at 62–291 (UniProt P07306 topology). HPA rates the tissue IHC pattern Enhanced, while noting only medium consistency between staining and RNA expression (HPA: reliability description).
| Strong, distinct cytoplasmic chromogen in liver hepatocytes, with little staining outside them. | This matches the reported positive tissue and cell type (HPA: liver hepatocytes High; distinct cytoplasmic expression). A visible cell border may fit receptor topology, but border staining is not required for a positive paraffin-section result (UniProt P07306 topology; HPA: tissue IHC profile). |
| Nuclei dominate the signal while hepatocyte cytoplasm is weak or clear. | Predominantly nuclear staining conflicts with the reported cytoplasmic tissue pattern and membrane-receptor topology (HPA: tissue IHC profile; UniProt P07306 topology). Review the nuclear counterstain and detection controls before scoring the nuclear color as ASGR1 (standard IHC practice). |
| Strong staining appears in non-hepatocyte cells, including cells in a tissue reported as negative. | That distribution warrants a specificity check rather than automatic scoring as ASGR1 (UniProt P07306: hepatic parenchymal-cell specificity; HPA: tissue IHC profile). Cross-reactivity or endogenous detection activity are possible IHC explanations; neither is established by this slide alone (standard IHC practice). |
| Pale, diffuse color covers cells and surrounding tissue without a distinct hepatocyte pattern. | Diffuse color is harder to interpret than the reported distinct hepatocyte staining (HPA: tissue IHC profile). Residual detection reagent, inadequate blocking, or insufficient washing can create background in chromogenic IHC; compare a no-primary control (standard IHC practice). |
| No convincing hepatocyte signal appears in the liver positive control. | An absent signal conflicts with the reported High hepatocyte staining (HPA: liver hepatocytes High). First check that the section contains preserved, assessable hepatocytes and that the detection system worked; the supplied sources do not establish ASGR1-specific fixation sensitivity (standard IHC practice; HPA: source scope). |
| Compartment and epitope location | The receptor spans the membrane, but HPA describes a cytoplasmic IHC pattern (UniProt P07306 topology; HPA: tissue IHC profile). Without the antibody’s epitope information, topology cannot predict whether its stain will trace the cell surface, intracellular receptor, or both (UniProt P07306 topology; standard IHC interpretation). |
| Tissue selection and validation | Liver hepatocytes provide the documented positive pattern (HPA: High). HPA reports adipose-tissue adipocytes as Not detected, while stomach and gallbladder glandular cells are Low; the latter are less clear negative comparators (HPA: tissue IHC). Two listed antibodies, HPA011954 and HPA012852, have Enhanced IHC validation (HPA: antibodies). |
| Protein variants and secreted annotation | UniProt lists 2 isoforms, H1a and H1b, and includes a Secreted annotation (UniProt P07306). HPA notes that at least one protein variant is secreted, complicating agreement between tissue RNA and protein location; this does not establish a separate diagnostic staining pattern (HPA: reliability description). |
| Antigen retrieval | Retrieval is a general paraffin-section IHC variable to optimize with tissue controls (standard IHC practice). The supplied HPA and UniProt records specify neither an ASGR1 retrieval condition nor a target-specific fixation effect; do not infer either from the extracellular domain or High liver staining (UniProt P07306 topology; HPA: tissue IHC). |
| IF/ICC Q&A: where is ASGR1 seen? | HPA reports mainly vesicles (supported), with additional cell-junction localization (approved), in its ICC-IF assessment (HPA: subcellular). These IF observations complement the cytoplasmic liver IHC pattern; they do not set a chromogenic paraffin-section scoring requirement (HPA: subcellular; HPA: tissue IHC). |
| Situation | Likely cause | Next action |
|---|---|---|
| Liver positive control is blank. | A failed staining or detection step is possible; blank liver conflicts with the reported High hepatocyte signal (standard IHC practice; HPA: liver hepatocytes High). | Check section integrity and reagent sequence, then review retrieval and detection with appropriate run controls (standard IHC practice). No ASGR1-specific retrieval condition or fixation sensitivity is supplied (HPA: source scope). |
| Nuclear color is mistaken for target staining. | Counterstain or nonspecific nuclear color can obscure the expected cytoplasmic pattern (standard IHC practice; HPA: tissue IHC profile). | Compare the no-primary control and distinguish chromogen from counterstain before scoring; require a distinct hepatocyte cytoplasmic component (standard IHC practice; HPA: tissue IHC profile). |
| Non-hepatocyte or reported-negative tissue stains strongly. | Cross-reactivity or endogenous detection activity may account for an unexpected distribution (standard IHC practice; UniProt P07306: hepatic parenchymal-cell specificity). | Compare liver with a documented Not detected cell type and inspect a no-primary control; investigate any persistent unexpected signal before assigning ASGR1 positivity (HPA: tissue IHC; standard IHC practice). |
| Chromogen is widespread and obscures cell boundaries. | Background from insufficient blocking or washing is possible when color lacks the reported distinct hepatocyte pattern (standard IHC practice; HPA: tissue IHC profile). | Check no-primary background, blocking, washing, and detection development; score only interpretable cellular staining (standard IHC practice). |
| Only weak staining appears in stomach or gallbladder. | Low staining in glandular cells is reported for both tissues (HPA: tissue IHC). | Treat these as low-expression comparators rather than definitive negative controls; use liver hepatocytes to judge whether the run detects the documented strong pattern (HPA: tissue IHC). |
| ICC-IF shows puncta or junctional signal that differs from the IHC slide. | HPA reports vesicles as the main ICC-IF location and cell junctions as an additional location, while liver IHC is described as cytoplasmic (HPA: subcellular; HPA: tissue IHC profile). | Interpret each preparation against its own reported pattern; assess the paraffin-section result by hepatocyte distribution and cytoplasmic chromogen (HPA: tissue IHC profile; standard IHC practice). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Enhanced — Medium consistency between antibody staining and RNA expression data. At least one protein variant secreted, tissue location of RNA and protein might differ and correlation is complex.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Liver | Hepatocytes | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Adrenal gland | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Appendix | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | Not detected | Protein (IHC) | HPA → |
| Breast | Adipocytes | Not detected | Protein (IHC) | HPA → |
Use hepatocyte localisation and the catalog antibody’s paraffin-section conditions to troubleshoot ASGR1 chromogenic IHC; evaluate IF/ICC separately (HPA tissue IHC; datasheet A05376-1).
The IHC-validated catalog antibody has paraffin-section images from human liver cancer and mouse and rat liver (A05376-1 IHC image captions). IF is listed, but no IF image is supplied (A05376-1 catalog).
A05376-1 has IHC images from paraffin sections of human liver cancer and mouse and rat liver; its applications also include IF and ICC (A05376-1 IHC image captions; catalog applications). A05376 lists IHC and human, mouse, and rat reactivity, with no IHC image supplied (A05376 catalog applications, reactivity, and image alts).
Which to pick: Choose A05376-1 for paraffin-section IHC because its own captions document staining in human liver cancer and mouse and rat liver (A05376-1 IHC image captions); the fixative is unreported (A05376-1 IHC image captions). Choose A05376-1 for IF/ICC because both applications are listed, although no IF image is supplied (A05376-1 catalog applications and image alts). For cross-species IHC, A05376-1 has image evidence across all three listed species, while A05376 lists the same reactivity without an IHC image (A05376-1 IHC image captions; A05376 catalog reactivity and image alts).