This website uses cookies to ensure you get the best experience on our website.
- Table of Contents
Plan CD83 IHC around cytoplasmic staining in subsets of immune cells across several tissues (HPA tissue IHC). Use consistent fixation and interpret staining with HPA’s reported off-target binding in mind (standard IHC practice; HPA tissue IHC).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Cytoplasm in immune-cell subsets (HPA tissue IHC) | |
| Staining pattern | Cytoplasmic staining in subsets of immune cells (HPA tissue IHC) | |
| Antigen retrieval | Citrate pH 6.0 HIER, 95–98 °C, 20 min (rule: cytoplasmic / membrane antigen) | |
| Positive control | Cerebellum+4 more · see all | |
| Negative control | Adipose tissue+4 more · see all |
| Fixation | Keep fixation consistent across sections. (standard IHC practice; not target-specific) | |
| Caveat | Presumed off-target staining may complicate interpretation (HPA tissue IHC) | |
| Regulation | Expressed by activated immune cells (UniProt) | |
| Isoform / epitope | No isoforms reported; extracellular vs cytoplasmic epitope matters (UniProt) |
The catalog antibody protocol is paired with 3 published CD83 IHC protocols from paraffin sections (PMC6281009; PMC11554423; PMC4433839).
| Sample | Paraffin-embedded human lung carcinoma tissue; fixative not specified (datasheet A01777) |
| Fixation | Image fixative and duration unreported (datasheet A01777); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat-induced epitope retrieval in citrate buffer, pH 6.0, 20 min at 95–98 °C (standard rule: cytoplasmic / membrane antigen) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% normal serum of the secondary host, 30 min, room temperature (standard) |
| Primary antibody | Rabbit anti-CD83, 1:50-1:200 (datasheet A01777) |
| Primary incubation | Overnight at 4 °C (standard) |
| Detection | HRP-polymer secondary, DAB chromogen 5–10 min (standard) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | CD83-positive staining in purkinje cells - cytoplasm/membrane of cerebellum (HPA tissue IHC: High). HPA tissue profile: Cytoplasmic expression in a subsets of immune cells in several tissues, including lymphoid organs. Additional expression in brain. No signal in the no-primary control. |
CD83 is a transmembrane protein with an extracellular region at residues 20–144 and a cytoplasmic region at 167–205 (UniProt Q01151 topology). In paraffin tissue sections, expect staining in subsets of immune cells, including cells in lymphoid organs (HPA tissue IHC: Enhanced reliability; medium staining consistency with RNA). UniProt also reports expression in activated lymphocytes, Langerhans cells and activated dendritic cells (UniProt Q01151 tissue specificity).
| Discrete staining in immune-cell subsets, with membrane and/or cytoplasmic signal. | This fits the HPA tissue IHC profile, which describes cytoplasmic staining in subsets of immune cells, and the membrane location reported by UniProt (HPA tissue IHC; UniProt Q01151 subcellular location). Score the stained cell population and compartment together; the HPA profile does not imply that every immune cell must stain. |
| Strong staining in cerebellar Purkinje cells. | This can be an expected tissue-specific result: HPA reports high cytoplasmic/membrane staining in Purkinje cells (HPA tissue IHC: cerebellum). It should not automatically be classified as an off-target result because CD83 is also associated with immune cells (HPA tissue IHC; UniProt Q01151 tissue specificity). |
| Predominantly nuclear staining in a tissue section, without the expected cell pattern. | Treat this as unconfirmed and investigate staining artefact. HPA ICC-IF lists nucleoplasm as an uncertain location, while plasma membrane is approved; its tissue IHC summary describes cytoplasmic immune-cell staining (HPA subcellular; HPA tissue IHC). An ICC-IF nuclear observation alone does not validate nuclear IHC staining. |
| Widespread staining of bronchial respiratory epithelium or another unexpected cell population. | Check for cross-reactivity or endogenous detection activity before assigning CD83 expression (general IHC practice). HPA reports bronchial respiratory epithelial cells as not detected and notes presumed off-target binding in its tissue IHC assessment (HPA tissue IHC: bronchus; HPA reliability description). |
| Diffuse staining across the section, or no signal in a known-positive area. | Diffuse background prevents a confident cell-level call; absent signal requires a control and workflow check (general IHC practice). For comparison, HPA reports medium staining in tonsillar germinal-center cells and lung macrophages (HPA tissue IHC: tonsil, lung). A negative run cannot overturn those observations without a working positive control. |
| Cell type and tissue context | HPA reports medium staining in appendix and tonsil germinal-center cells, bone-marrow hematopoietic cells, lung macrophages, lymph-node non-germinal-center cells and splenic red-pulp cells (HPA tissue IHC). Interpret a positive result by identifying the stained cells, since signal intensity alone does not establish specificity (general IHC practice). |
| Topology and unknown antibody epitope | CD83 has an extracellular region at 20–144, a transmembrane segment at 145–166 and a cytoplasmic region at 167–205 (UniProt Q01151 topology). The supplied record does not locate the antibody epitope; select any permeabilisation decision using the antibody's stated epitope and assay instructions (general IHC practice). |
| Antigen retrieval | Retrieval conditions can affect immunostaining in paraffin sections (general IHC practice). No CD83-specific retrieval condition or fixation sensitivity is established by the supplied UniProt and HPA records. Use the IHC-validated antibody's documented conditions as a starting point and judge changes against positive and negative controls (general IHC practice). |
| Can ICC-IF localisation guide this IHC call? | Use it as context, not a paraffin-section protocol: HPA ICC-IF approves plasma membrane and Golgi localisation, while nucleoplasm and nucleoli are uncertain (HPA subcellular). Compare those findings with the cytoplasmic immune-cell tissue IHC profile when interpreting a section (HPA tissue IHC). |
| Situation | Likely cause | Next action |
|---|---|---|
| No staining in an expected positive area. | The run may have failed, or the sampled section may lack the relevant cells (general IHC practice). | Confirm that the expected population is present; use a positive tissue control with a reported HPA pattern, such as tonsillar germinal-center cells, and check the antibody's IHC conditions and detection steps (HPA tissue IHC: tonsil; general IHC practice). |
| Weak or patchy staining in lymphoid tissue. | CD83 staining can be limited to a subset of cells; HPA rates tonsillar germinal-center cells medium, not uniformly high (HPA tissue IHC: tonsil; HPA tissue profile). | Inspect the relevant cell compartment and compare it with a concurrent positive control before calling the section negative (general IHC practice). Record cell distribution separately from stain intensity so a small positive subset remains visible in the interpretation. |
| Broad epithelial staining, including bronchial respiratory epithelium. | Cross-reactivity or endogenous detection activity may mimic a positive stain (general IHC practice). Bronchial respiratory epithelial cells are reported as not detected (HPA tissue IHC: bronchus). | Review a no-primary control for detection background and compare staining with an independently validated IHC antibody if available (general IHC practice). HPA lists two IHC antibodies with Enhanced validation, HPA041454 and CAB002509 (HPA antibodies). |
| Section-wide haze obscures individual cells. | Excess nonspecific antibody or detection background can obscure cell boundaries (general IHC practice). | Check the no-primary control, blocking and washes; adjust antibody concentration only within the chosen antibody's documented IHC conditions (general IHC practice). Reassess whether distinct cells and compartments emerge before scoring CD83. |
| Nuclear-only staining is being scored as CD83 positive. | Nucleoplasm is an uncertain ICC-IF location, and nuclear-only staining does not match the HPA tissue IHC summary of cytoplasmic immune-cell subsets (HPA subcellular; HPA tissue IHC). | Recheck the stained cell type, counterstain and controls, then compare with a section showing the reported tissue pattern (general IHC practice; HPA tissue IHC). Keep the nuclear result unconfirmed unless independent evidence supports it. |
| The proposed negative control tissue contains some stained cells. | A tissue-level label can hide cell-specific expression; HPA reports both positive and not-detected cell populations by tissue (HPA tissue IHC). | Score the specified negative population rather than treating every cell in that tissue as negative. For example, adipocytes in adipose tissue are reported not detected (HPA tissue IHC: adipose tissue); assess unexpected staining against that cell-level reference. |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Enhanced — Medium consistency between antibody staining and RNA expression data. Presumed off target binding observed and disregarded. Antibody staining in cells/structures not annotated, view images.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Cerebellum | Purkinje cells - cytoplasm/membrane | High | Protein (IHC) | HPA → |
| Appendix | Germinal center cells | Medium | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | Medium | Protein (IHC) | HPA → |
| Lung | Macrophages | Medium | Protein (IHC) | HPA → |
| Lymph node | Non-germinal center cells | Medium | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Adrenal gland | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Breast | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Bronchus | Respiratory epithelial cells | Not detected | Protein (IHC) | HPA → |
| Cervix | Glandular cells | Not detected | Protein (IHC) | HPA → |
Troubleshoot CD83 staining in paraffin sections by checking retrieval, cellular context, and compartment before interpreting chromogenic signal.
The catalog has one anti-CD83 antibody with a real IHC image from paraffin-embedded human lung carcinoma tissue (image caption); Human, Mouse and Rat reactivity is listed (catalog). No IF data is shown (catalog).
A01777 is listed for IHC and WB, with Human, Mouse and Rat reactivity (catalog). Its IHC image shows paraffin-embedded human lung carcinoma tissue (image caption); no IF image is provided (catalog).
Which to pick: For paraffin-section IHC, choose A01777: its own image caption documents staining in paraffin-embedded human lung carcinoma tissue, and the listed IHC dilution is 1:50–1:200 (image caption; datasheet). The caption does not report the fixative (image caption). For Mouse or Rat tissue, A01777 lists reactivity, but its IHC image documents only human tissue (catalog; image caption); no IF/ICC application or IF dilution is listed, so there is no IF/ICC pick here (catalog).