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- Table of Contents
CES2 IHC shows granular cytoplasmic staining in hepatocytes, renal tubules and gastrointestinal tissue (HPA tissue IHC). This guide covers the catalog antibody’s IHC-P conditions (datasheet A02868-2) and cell-specific scoring (standard IHC practice).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Granular cytoplasmic staining (HPA tissue IHC) | |
| Staining pattern | Granular cytoplasm in hepatocytes and gut endocrine cells (HPA tissue IHC) | |
| Antigen retrieval | EDTA pH 8.0 HIER, heat-mediated (datasheet A02868-2) | |
| Positive control | Colon+4 more · see all | |
| Negative control | Adipose tissue+4 more · see all |
| Fixation | Keep fixation consistent across sections (standard IHC practice; not target-specific) | |
| Caveat | Hepatic endogenous peroxidase may mimic DAB signal (standard IHC practice) | |
| Regulation | Intestine enriched; liver moderate (UniProt) | |
| Isoform / epitope | 4 isoforms; signal peptide 1–26 is removed (UniProt) |
Compare the catalog antibody’s paraffin IHC protocol (datasheet A02868-2) with three published CES2 IHC methods (PMC6416336; PMC4200864; PMC11845761).
| Sample | Paraffin-embedded human liver cancer tissue; fixative not specified (datasheet A02868-2) |
| Fixation | Image fixative and duration unreported (datasheet A02868-2); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: EDTA pH 8.0 (datasheet A02868-2); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A02868-2) |
| Primary antibody | Rabbit anti-CES2, 2-5 μg/ml (datasheet A02868-2) |
| Primary incubation | Overnight at 4 °C (datasheet A02868-2) |
| Detection | HRP-conjugated secondary, DAB chromogen (datasheet A02868-2) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | CES2-positive staining in endocrine cells of colon (HPA tissue IHC: High). HPA tissue profile: Granular cytoplasmic expression in several tissues including liver, renal tubules and gastrointestinal tract. No signal in the no-primary control. |
CES2 is an endoplasmic reticulum lumen protein with no transmembrane segment (UniProt O00748 topology). In paraffin section IHC, expect granular cytoplasmic staining in hepatocytes, renal tubular cells and gastrointestinal endocrine cells (HPA: tissue IHC profile; High in these cells). HPA rates the tissue pattern Enhanced, citing agreement between antibody staining and RNA expression (HPA: tissue IHC reliability).
| Granular cytoplasmic chromogen appears in hepatocytes, renal tubular cells or intestinal endocrine cells. | This matches the reported CES2 tissue pattern (HPA: granular cytoplasmic profile; High in liver hepatocytes, kidney tubular cells and intestinal endocrine cells). Score the relevant cell population separately from surrounding tissue; a whole-section average can obscure cell-restricted staining (general IHC practice). |
| The dominant signal is confined to nuclei, cell borders or extracellular material. | That compartment conflicts with the granular cytoplasmic tissue pattern (HPA: tissue IHC profile) and the annotated ER lumen location (UniProt O00748 subcellular location). Treat it as suspect; inspect a known-positive section and the detection-only control before assigning it to CES2 (general IHC practice). |
| Strong staining occurs chiefly in adipocytes while expected positive cells are weak. | Adipocytes are reported as Not detected in adipose tissue (HPA: adipose tissue IHC), whereas hepatocytes and renal tubular cells are High (HPA: liver and kidney IHC). Cross-reactivity or endogenous detection activity is possible, not established; compare primary-omission and positive-tissue controls (general IHC practice). |
| A smooth chromogenic haze spans many cell types and obscures their boundaries. | Widespread haze is difficult to reconcile with the reported granular, cell-associated pattern (HPA: tissue IHC profile). Check the primary-omission control, blocking, washes and detection exposure for nonspecific background (general IHC practice); the appearance alone does not identify its cause. |
| No stain appears in a liver or kidney section expected to contain positive cells. | HPA reports High staining in hepatocytes and renal tubular cells (HPA: liver and kidney IHC). Confirm that those cells are present, then review the catalog antibody's IHC-P conditions and run the detection controls (general IHC practice). Absence alone cannot establish biological loss of CES2. |
| Cell population and tissue choice | Select the cells to score before judging a section: HPA reports High staining in small-intestinal, duodenal and colonic endocrine cells, hepatocytes and renal tubular cells (HPA: tissue IHC). UniProt describes preferential intestinal expression, highest in small intestine, with moderate liver expression (UniProt O00748 tissue specificity). These descriptions use different measures; do not turn them into a fixed IHC intensity ranking. |
| Protein location and processing | CES2 is annotated in the ER lumen, without a transmembrane segment; its signal peptide spans residues 1–26 and the annotated chain spans 27–559 (UniProt O00748 topology and processing). These facts support an intracellular interpretation, but they do not identify the catalog antibody's epitope or predict its retrieval response. |
| Antibody validation | HPA lists IHC as Enhanced for 2 antibodies, HPA018897 and HPA074629 (HPA: antibody validation). Its tissue-level Enhanced rating reflects agreement between staining and RNA expression (HPA: tissue IHC reliability). These ratings support the reported pattern; they do not validate every antibody or every staining condition. |
| IF/ICC Q: Must fluorescence reproduce the paraffin-section pattern? | HPA reports mainly Golgi localization in ICC-IF, with additional ER and cytosol signal (HPA: subcellular ICC-IF), while tissue IHC is described as granular cytoplasmic (HPA: tissue IHC profile). Compare results within their own application and resolution. HPA018897 has IHC Enhanced but ICC Uncertain; HPA074629 has no ICC rating listed (HPA: antibody validation). |
| Situation | Likely cause | Next action |
|---|---|---|
| Known-positive hepatocytes or renal tubular cells have no visible chromogen. | A failed staining or detection step is possible; those cells are reported High (HPA: liver and kidney IHC). The supplied sources do not establish CES2-specific fixation sensitivity. | Check tissue identity and run an established positive section. Review the catalog antibody's IHC-P instructions for retrieval, dilution and detection, then check reagent and incubation steps (general IHC practice). |
| Signal is diffuse across nearly every cell and the surrounding section. | Nonspecific primary or detection background is possible; the reported tissue pattern is granular cytoplasmic (HPA: tissue IHC profile). Appearance alone cannot distinguish these mechanisms. | Compare a primary-omission control with the stained section. Review blocking, washes and chromogen development, adjusting only the step implicated by that comparison (general IHC practice). |
| A negative comparison area, such as adipocytes, stains strongly. | HPA reports adipocytes as Not detected in adipose tissue (HPA: adipose tissue IHC). Cross-reactivity or endogenous detection activity could account for discordant staining. | Check a primary-omission control and compare the same run with known-positive cells. If staining persists without primary antibody, investigate the detection system (general IHC practice). |
| Only nuclei or cell borders stain in a putative positive tissue. | The dominant location disagrees with HPA's granular cytoplasmic IHC pattern (HPA: tissue IHC profile) and UniProt's ER lumen annotation (UniProt O00748 subcellular location). | Recheck morphology and compartment assignment against a positive section; review primary-omission and detection controls before scoring that signal as CES2 (general IHC practice). |
| A gastrointestinal section looks weak despite an expected positive result. | The scored area may miss endocrine cells: HPA specifies High staining in intestinal endocrine cells (HPA: small intestine, duodenum and colon IHC). A whole-mucosa estimate can dilute a cell-specific observation (general IHC practice). | Locate and score the relevant cell population on the section, then compare it with a positive control from the same run (general IHC practice). |
| ICC-IF appears Golgi dominant while paraffin-section IHC appears granular cytoplasmic. | Both descriptions occur in the supplied records: Golgi dominant with additional ER and cytosol in ICC-IF (HPA: subcellular ICC-IF), and granular cytoplasmic in tissue IHC (HPA: tissue IHC profile). | Interpret each application against its own HPA reference. Check the antibody's application-specific validation before treating the difference as a staining failure (HPA: antibody validation; general IHC/IF practice). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Enhanced — High consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Colon | Endocrine cells | High | Protein (IHC) | HPA → |
| Duodenum | Endocrine cells | High | Protein (IHC) | HPA → |
| Kidney | Cells in tubules | High | Protein (IHC) | HPA → |
| Liver | Hepatocytes | High | Protein (IHC) | HPA → |
| Lung | Alveolar cells type I | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | Not detected | Protein (IHC) | HPA → |
| Breast | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Caudate | Glial cells | Not detected | Protein (IHC) | HPA → |
| Cerebellum | Cells in granular layer | Not detected | Protein (IHC) | HPA → |
Troubleshoot CES2 staining in paraffin sections by checking retrieval, tissue preservation, cellular pattern and controls before interpreting DAB signal.
Two anti-CES2 antibodies have human paraffin-section IHC images (catalog IHC captions: A02868-1, A02868-2). A02868-2 also has human paraffin-section IF data and lists mouse reactivity (catalog IF caption and reactivity).
A02868-1 has an IHC image from formalin-fixed, paraffin-embedded human hepatocarcinoma (A02868-1 IHC caption). A02868-2 has IHC and IF images from paraffin-embedded human liver cancer tissue; its fixative is unreported (A02868-2 IHC and IF captions).
Which to pick: For human tissue IHC, choose A02868-1 when a paraffin-section, paraffin-embedded example is useful (A02868-1 IHC caption), or A02868-2 for an example using EDTA retrieval at pH 8.0 and 2 μg/ml primary antibody; its fixative is unreported (A02868-2 IHC caption). For IF, choose A02868-2, which has a human paraffin-section IF image at 5 μg/ml; ICC validation is unreported (A02868-2 IF caption and applications). For mouse work, A02868-2 lists mouse reactivity, but its supplied IHC and IF images use human tissue (A02868-2 reactivity and image captions). The selected A02868-2 tissue-IHC caption documents paraffin sections, but does not specify the fixative (selected-SKU IHC image A02868-2).