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- Table of Contents
Plan chromogenic CREBZF IHC on paraffin sections using the catalog antibody’s 1:100–1:300 IHC dilution range (datasheet A07952-2). Expect cytoplasmic staining in many tissues, but interpret it cautiously because tissue IHC reliability is uncertain (HPA tissue IHC).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Cytoplasmic tissue staining; nuclear annotation (HPA tissue IHC; UniProt) | |
| Staining pattern | Cytoplasmic staining in most tissues (HPA tissue IHC) | |
| Antigen retrieval | Tris-EDTA pH 9.0 HIER, heat-mediated (datasheet A07952-2) | |
| Positive control | Caudate+4 more · see all | |
| Negative control | Adrenal gland+4 more · see all |
| Fixation | Keep fixation consistent across sections. (standard IHC practice; not target-specific) | |
| Caveat | Low staining–RNA concordance makes tissue calls uncertain (HPA tissue IHC) | |
| Regulation | Adult heart, liver and muscle enriched (UniProt) | |
| Isoform / epitope | 0 annotated isoforms; one full-length chain (UniProt) |
The catalog antibody protocol is paired with 4 published CREBZF IHC protocols covering mouse uterus, mouse ovary, and gastric cancer tissue (PMC5915772; PMC6274897; PMC7085260; PMC3878900).
| Sample | Paraffin-embedded human tonsil tissue; fixative not specified (datasheet A07952-2) |
| Fixation | Image fixative and duration unreported (datasheet A07952-2); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: Tris-EDTA pH 9.0 (datasheet A07952-2); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% normal serum of the secondary host, 30 min, room temperature (standard) |
| Primary antibody | Rabbit anti-CREBZF, 1:100-1:300 (datasheet A07952-2) |
| Primary incubation | Overnight at 4 °C (standard) |
| Detection | HRP-polymer secondary, DAB chromogen 5–10 min (standard) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | CREBZF-positive staining in neuronal cells of caudate (HPA tissue IHC: Medium). HPA tissue profile: Cytoplasmic expression in most tissues. No signal in the no-primary control. |
For paraffin-section IHC, HPA reports mostly cytoplasmic CREBZF staining, including medium staining in heart cardiomyocytes, esophageal squamous epithelial cells and kidney glomerular cells (HPA: tissue IHC). UniProt places CREBZF in the nucleus, where it can colocalize in PML nuclear bodies, and reports no transmembrane segment (UniProt Q9NS37). Interpret either compartment cautiously: HPA rates its tissue IHC pattern Uncertain because staining and RNA expression have low consistency (HPA: reliability).
| Medium cytoplasmic staining in cardiomyocytes, esophageal squamous epithelial cells or glomerular cells. | This matches reported positive tissue and cell combinations (HPA: tissue IHC, Medium). Record the stained cell type and compartment; the cytoplasmic IHC profile remains Uncertain and does not establish exclusive cytoplasmic localization (HPA: reliability; UniProt Q9NS37: nucleus). |
| Nuclear staining in cells being assessed for CREBZF. | A nuclear signal is biologically plausible because UniProt places CREBZF in the nucleus and describes colocalization in PML nuclear bodies (UniProt Q9NS37). Tissue IHC alone cannot confirm that fine pattern; compare staining with the cytoplasmic HPA tissue profile and controls (HPA: tissue IHC, Uncertain). |
| Predominantly cell-surface or extracellular staining, with no convincing intracellular signal. | Treat this as a possible artifact: CREBZF has no transmembrane segment or signal peptide and is annotated as nuclear (UniProt Q9NS37). Check section morphology and controls before assigning the signal to CREBZF. |
| Strong staining in HPA-undetected cells, or broad diffuse color across cells and surrounding tissue. | Unexpected cell staining may reflect cross-reactivity or endogenous detection activity; diffuse color suggests background. HPA reports no detection in adrenal glandular cells and liver cholangiocytes, but its Uncertain IHC reliability makes either finding a comparison point rather than a definitive negative (HPA: tissue IHC, reliability). |
| No staining in a comparison section expected to show a signal. | Absence in heart cardiomyocytes or esophageal squamous epithelial cells conflicts with HPA's Medium observations (HPA: tissue IHC). First check whether the expected cells are present, then review detection and controls; an HPA-positive tissue is not a guaranteed positive control because the profile is Uncertain (HPA: reliability). |
| Compartment evidence | UniProt annotates nuclear CREBZF and PML nuclear-body colocalization (UniProt Q9NS37), whereas tissue IHC is mostly cytoplasmic and Uncertain (HPA: tissue IHC). Report the observed compartment rather than forcing agreement between the sources. |
| Cell and tissue selection | HPA reports Medium staining in heart cardiomyocytes, esophageal squamous epithelial cells and kidney glomerular cells (HPA: tissue IHC). Its undetected calls apply to specified cells, such as liver cholangiocytes, not every cell in those organs (HPA: tissue IHC). |
| Molecular interpretation | CREBZF has no transmembrane segment, signal peptide or annotated processing into separate chains (UniProt Q9NS37). Those features support questioning a dominant surface or extracellular pattern; they do not establish how fixation or antigen retrieval affects IHC staining. |
| IF/ICC Q&A: does it have the same expected compartment as tissue IHC? | HPA approves nucleoplasm and mitochondria as ICC-IF locations and lists images from HaCaT, HeLa and U2OS (HPA: subcellular). Tissue IHC reports mostly cytoplasmic staining with Uncertain reliability (HPA: tissue IHC); assess IF/ICC on its own guide page. |
| Situation | Likely cause | Next action |
|---|---|---|
| No signal in heart cardiomyocytes despite intact tissue morphology. | The result differs from HPA's Medium cardiomyocyte staining, but the tissue IHC profile is Uncertain (HPA: tissue IHC, reliability); the cause cannot be assigned from this comparison alone. | Confirm that cardiomyocytes were evaluated; inspect the assay's positive and detection controls, then document retrieval and antibody conditions used. Treat these as general IHC checks, not evidence of CREBZF-specific fixation sensitivity. |
| Only nuclei stain, while expected cytoplasmic staining is absent. | Nuclear CREBZF is plausible (UniProt Q9NS37), but the compartment differs from HPA's mostly cytoplasmic tissue IHC profile (HPA: tissue IHC, Uncertain). | Record the compartment and cell type, compare with a second HPA-reported positive tissue, and review control sections before deciding whether the signal is specific. |
| Cell surfaces or extracellular material stain more strongly than cells. | That distribution is difficult to reconcile with nuclear annotation and the absence of a signal peptide or transmembrane segment (UniProt Q9NS37). | Inspect morphology and no-primary control staining; review blocking, washing and chromogen development as general IHC background checks before interpreting the result. |
| Unexpected staining appears in adrenal glandular cells or liver cholangiocytes. | HPA reports those cell populations as Not detected, although its IHC reliability is Uncertain (HPA: tissue IHC, reliability). Cross-reactivity or endogenous detection activity is possible. | Check that the stained cells were identified correctly; compare no-primary and other detection controls, and avoid calling the tissue wholly negative or wholly positive. |
| Brown color spreads across the section without clear cell boundaries. | Diffuse background can obscure the cell and compartment pattern needed to compare with HPA tissue IHC and UniProt localization (HPA: tissue IHC; UniProt Q9NS37). | Review no-primary control, blocking, washing and chromogen development using standard IHC practice; score only clearly localized cellular staining after background is resolved. |
| Heart and liver give apparently conflicting results. | UniProt reports abundant adult expression in both organs (UniProt Q9NS37), while HPA reports Medium staining in heart cardiomyocytes and no detection in liver cholangiocytes (HPA: tissue IHC). These refer to different measurements and specified cells. | Score each identified cell population separately and report compartment and intensity. Do not infer that all liver cells lack CREBZF or use cholangiocyte staining to invalidate a heart result. |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Uncertain — Low consistency between antibody staining and RNA expression data. Pending external verification.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Caudate | Neuronal cells | Medium | Protein (IHC) | HPA → |
| Cerebellum | Purkinje cells | Medium | Protein (IHC) | HPA → |
| Cerebral cortex | Neuropil | Medium | Protein (IHC) | HPA → |
| Esophagus | Squamous epithelial cells | Medium | Protein (IHC) | HPA → |
| Gallbladder | Glandular cells | Medium | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adrenal gland | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | Not detected | Protein (IHC) | HPA → |
| Breast | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Cervix | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Duodenum | Glandular cells | Not detected | Protein (IHC) | HPA → |
Troubleshoot CREBZF staining by checking retrieval, compartment, cell type, controls and scoring before interpreting chromogenic signal.
A07952-2 has IHC data from paraffin-embedded human tonsil (IHC image caption) and IF data from HepG2 cells (IF image caption); listed reactivity is human and mouse (catalog reactivity).
A07952-2 will render with a paraffin-embedded human tonsil IHC image (IHC image caption). The same SKU lists IF and IHC applications (catalog applications) and has a HepG2 cell IF image (IF image caption).
Which to pick: Choose A07952-2 for paraffin-section IHC because its own image shows paraffin-embedded human tonsil (IHC image caption); the fixative is unreported (IHC image caption). For cell IF/ICC, A07952-2 has an IF image from HepG2 cells (IF image caption), though ICC is not separately listed (catalog applications). For human and mouse work, A07952-2 lists both species (catalog reactivity), while its supplied images show human tonsil and HepG2 cells only (IHC/IF image captions); it is rabbit-hosted with no clone specified (catalog host/clone).