CTSE · Western blot design guide

CTSE Western Blot Planning Guide

Plan a CTSE Western blot around the catalog-observed 42.8 kDa band, image-backed A04874-1 evidence, HPA controls, and verified protocol records.

Evidence assembled July 2026 · For research use; verify linked source records and product datasheet before use
Western blot protocol sheet for CTSE (CTSE): expected band 42.8 kDa, antibody A04874-1, and PMC-cited SDS-PAGE protocol steps
CTSE Western blot protocol sheet — expected band 42.8 kDa, antibody A04874-1, controls and PMC citations. Open the full CTSE WB guide →

CTSE Western Blot Experimental Design Guide

Expected bands, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.

Must know before running
Expected band 42.8 kDa
Observed band Not reported — verify product WB image
Gel 12-15%
Positive control ⓘ Stomach
Negative control ⓘ Adrenal gland
Important caveats
Reasons your observed band may differ from the expected size.
ⓘ Calculated mass 42.8 kDa
ⓘ Localization Endosome
ⓘ Processing / PTM Record-dependent
ⓘ Reactivity Human / Mouse / Rat
Section 1

Real Curated CTSE Western Blot Protocols

Start with the molecular-weight rule, then compare verified publication-derived conditions.

Recommended Western blot protocol parameters
Sample / lysateAppendix
Gel %12-15%
Load20-30 µg total protein per lane
TransferSemi-dry, standard transfer
Membrane0.45 µm PVDF
Blocking5% non-fat milk or 5% BSA in TBST
PrimaryA04874-1 at datasheet starting dilution
Primary incubationOvernight at 4 °C with gentle agitation
SecondarySpecies-matched HRP conjugate at validated dilution
Wash3 × 5 min in TBST
DetectionChemiluminescent substrate
ExposureBracket exposures to avoid saturation
Section 2

What Is the Expected CTSE Western Blot Band Size?

Use the product-observed 42.8 kDa band as the primary planning value and retain the UniProt calculated mass as context.

What am I looking at on my blot?
42.8 kDaMatches the authoritative product WB observation.
42.8 kDa calculatedUse as UniProt context, not as a replacement observed band.
Unexpected additional signalDo not assign identity without orthogonal positive/negative controls.
💡Expected CTSE appearancePlan around 42.8 kDa and keep the calculated mass as supporting context.
How each factor affects band size
Catalog-observed band42.8 kDa; use this as the primary experimental expectation.
Calculated mass42.8 kDa from UniProt P14091; retain as context.
Gel selection12-15%; shared with the recommended protocol and poster.
Specificity checkCompare the lead HPA positive and negative controls with A04874-1.
Why is my band missing or off?
SituationLikely causeNext action
42.8 kDaMatches the authoritative product WB observation.Confirm with orthogonal controls and the linked product record.
Additional bandMay reflect processing, modification, or non-specific signal.Run a dilution series and compare positive/negative controls.
Weak signalTarget abundance or transfer may be limiting.Verify transfer, increase positive-control abundance, and bracket exposure.

Sample controls for CTSE Western blot

🧪Use Stomach as the first positive-control candidate and Adrenal gland as the HPA Not detected negative candidate.
Positive control: Stomach (High)
Negative control: Adrenal gland (Not detected)
HPA protein score determines control status; other expression data is supporting context only.

HPA tissue expression evidence for CTSE

Comprehensive Human Protein Atlas IHC scoring per tissue. Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.

Positive expression · recommended positive controls

TissueCell typeLevelEvidenceSource
Stomach Reported tissue cells High Protein (HPA) HPA →
Appendix Reported tissue cells High Protein (HPA) HPA →
Duodenum Reported tissue cells High Protein (HPA) HPA →
Rectum Reported tissue cells High Protein (HPA) HPA →

Undetected expression · recommended negative controls

TissueCell typeLevelEvidenceSource
Adrenal gland Reported tissue cells Not detected Protein (HPA) HPA →
Breast Reported tissue cells Not detected Protein (HPA) HPA →
Section 3

Advanced CTSE Western Blot Tips

Deeper troubleshooting and optimisation questions for CTSE, answered from its protein features.

Which band should guide the blot?
Use 42.8 kDa, the observation attached to the authoritative A04874-1 WB record.
How should calculated mass be interpreted?
Treat the UniProt calculated mass as context; it does not replace the catalog-observed 42.8 kDa expectation.
Which positive control should I start with?
Start with Stomach, the lead HPA protein-expression candidate.
Which negative control is defensible?
Use Adrenal gland as an orthogonal HPA Not detected candidate.
Which gel should I use?
Use 12-15% consistently across the quick facts, protocol table, and poster.
What transfer method to use for CTSE Western blot?
Use the transfer method in the recommended protocol and verify transfer before blocking.
How should A04874-1 be started?
Start at the linked datasheet condition and run a three-point primary-antibody dilution test.
Which publication-derived protocols can I compare?
Compare only the supplied target-verified records: PMC5460450, PMC3192174, PMC12650638.
Boster reagents

CTSE Western Blot Reagents

Human/Mouse/Rat-reactive CTSE Western blot reagents with authoritative product imagery.

Real WB data Western blot validation image for CTSE using A04874-1; observed band 42.8 kDa
Anti-Cathepsin E/CTSE Antibody Picoband®
Cat # A04874-1

Only image-backed, WB-validated Human/Mouse/Rat recommendations from the prepared catalog evidence are shown.

Source: prepared picoband-wb product evidence; each card retains its own SKU, URL, observed band, and authoritative WB image.