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- Table of Contents
Plan chromogenic DAZL IHC using testis pachytene spermatocytes as a positive reference (HPA tissue IHC). The catalog antibody's IHC range is 0.5–1 μg/mL (datasheet A02069-2); interpret compartmental staining in light of DAZL's developmental shift from nuclear to cytoplasmic localisation (UniProt).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Predominantly cytoplasmic; nuclear earlier in germ-cell development (UniProt) | |
| Staining pattern | High in pachytene spermatocytes; compartment unreported (HPA tissue IHC) | |
| Antigen retrieval | EDTA pH 8.0 HIER, heat-mediated (datasheet A02069-2) | |
| Positive control | Testis | |
| Negative control | Adipose tissue+4 more · see all |
| Fixation | Keep paraffin-section fixation consistent across samples (standard IHC practice; not target-specific) | |
| Caveat | Developmental stage can shift nuclear versus cytoplasmic localisation (UniProt) | |
| Regulation | Testis-specific expression (UniProt) | |
| Isoform / epitope | 2 isoforms; epitope differences unreported (UniProt) |
The catalog antibody protocol uses EDTA retrieval (datasheet A02069-2); the published chromogenic IHC protocol below stained human glioblastoma tissue (PMC7368788).
| Sample | Paraffin-embedded human testies cancer tissue; fixative not specified (datasheet A02069-2) |
| Fixation | Image fixative and duration unreported (datasheet A02069-2); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: EDTA pH 8.0 (datasheet A02069-2); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A02069-2) |
| Primary antibody | Rabbit anti-DAZL, 0.5-1μg/ml (datasheet A02069-2) |
| Primary incubation | Overnight at 4 °C (datasheet A02069-2) |
| Detection | Streptavidin-biotin complex (SABC), DAB chromogen (datasheet A02069-2) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | DAZL-positive staining in pachytene spermatocytes of testis (HPA tissue IHC: High). HPA tissue profile: High expression in testis. No signal in the no-primary control. |
DAZL staining should center on testicular germ cells, with high signal in pachytene spermatocytes (HPA: High in pachytene spermatocytes; tissue IHC reliability Enhanced). Expect predominantly cytoplasmic staining, while nuclear localization can occur earlier in germ cell development (UniProt Q92904: subcellular location). DAZL has no transmembrane segment (UniProt Q92904: topology).
| Pachytene spermatocytes stain strongly; nearby cells show less or no signal. | This matches the documented high pachytene spermatocyte signal in testis (HPA: tissue IHC, Enhanced reliability). Judge cell identity alongside staining intensity: HPA describes a cell-specific pattern, not uniform staining across the section. |
| Germ cell staining is cytoplasmic, with some nuclear staining in earlier cells. | A predominantly cytoplasmic pattern fits DAZL localization; nuclear localization is also reported during earlier germ cell development (UniProt Q92904: subcellular location). Nuclear signal alone is therefore insufficient to call a slide artefactual without considering cell stage. |
| The strongest signal outlines membranes or fills extracellular spaces. | That distribution conflicts with the reported cytoplasmic and nuclear locations and the absence of a transmembrane segment (UniProt Q92904: subcellular location; topology). Check detection background and tissue morphology before interpreting the signal as DAZL. |
| Adipocytes, glandular cells or other expected negative cells stain strongly. | This conflicts with the listed examples of cells in which DAZL was not detected (HPA: adipose tissue adipocytes; adrenal and appendix glandular cells). Cross-reactivity or endogenous detection activity are possible explanations; the pattern alone cannot distinguish them. |
| Pachytene spermatocytes show no convincing signal. | This conflicts with the expected high testis signal (HPA: pachytene spermatocytes). First check that the expected cells are present and identifiable; an absent signal can also reflect a failed staining workflow or an antibody that has not performed in this preparation. |
| Tissue and cell selection | Testis is the strongest documented tissue choice, with high staining in pachytene spermatocytes (HPA: tissue IHC). Adipose tissue adipocytes and adrenal glandular cells are documented negative examples (HPA: Not detected); interpret controls at the stated cell level. |
| Germ cell stage and compartment | DAZL is predominantly cytoplasmic, with nuclear localization reported in earlier germ cells and cytoplasmic localization later (UniProt Q92904: subcellular location). A single compartment rule applied to every germ cell stage would overstate the evidence. |
| Protein topology and processing | DAZL has no transmembrane segment, signal peptide or propeptide (UniProt Q92904: topology; processing). These annotations support intracellular interpretation; they do not identify an antibody epitope or establish any antigen retrieval requirement. |
| Antibody validation | HPA reports Enhanced IHC status for HPA019777 and Supported IHC status for HPA047113 (HPA: antibody validation). These are antibody-specific assessments; they do not establish the performance of an unspecified catalog antibody in a new laboratory workflow. |
| Isoforms and epitope knowledge | UniProt lists 2 DAZL isoforms and an RRM at residues 40–115 plus a DAZ region at 167–190 (UniProt Q92904: isoforms; domains). No antibody epitope is supplied, so isoform detection cannot be inferred from these annotations. |
| Situation | Likely cause | Next action |
|---|---|---|
| No signal in a testis section containing pachytene spermatocytes. | The result disagrees with the documented high cell-level signal (HPA: pachytene spermatocytes), but the staining result alone does not identify which workflow step failed. | Verify tissue morphology and cell identification, then check primary antibody application, chromogen development and the run controls. Review antigen retrieval using the antibody's validated IHC instructions; no DAZL-specific retrieval condition is supplied. |
| Diffuse haze obscures germ cell boundaries. | Nonspecific antibody binding or background from the detection system are general IHC possibilities; HPA's Enhanced tissue profile does not explain background in this particular run (HPA: tissue IHC reliability Enhanced). | Compare with a primary-antibody omission control. Review blocking, washes and antibody concentration using the chosen antibody's instructions; retain settings that reveal the expected cell-level pattern without diffuse staining (HPA: pachytene spermatocytes, High). |
| Signal is strongest at membranes or outside cells. | This is inconsistent with reported cytoplasmic and nuclear DAZL and its lack of a transmembrane segment (UniProt Q92904: subcellular location; topology). | Check morphology, counterstain alignment and the detection control. Reassess the primary antibody result against intracellular staining in identifiable germ cells before scoring the peripheral signal as positive. |
| Strong staining appears in a documented negative cell type. | DAZL was not detected in adipose tissue adipocytes or adrenal glandular cells in the supplied profile (HPA: tissue IHC). Cross-reactivity and endogenous detection activity are possible, not proven, causes. | Compare a primary-antibody omission control and, for enzyme-based detection, check the relevant endogenous activity control. Score the unexpected cells separately from pachytene spermatocytes rather than treating all brown signal as DAZL. |
| A nuclear signal prompts concern despite otherwise plausible germ cell staining. | UniProt reports nuclear DAZL in earlier germ cell development and predominantly cytoplasmic localization overall (UniProt Q92904: subcellular location). The compartment needs interpretation with cell identity and stage. | Confirm which germ cells carry the nuclear signal and whether pachytene spermatocytes show the expected strong staining (HPA: pachytene spermatocytes, High). Investigate nuclear staining in unrelated cells against the negative controls. |
| Q: Can IF/ICC establish the expected DAZL compartment here? | HPA provides no main ICC-IF location and lists no cell lines with ICC-IF images for DAZL (HPA: subcellular record). UniProt reports cytoplasmic and nuclear localization (UniProt Q92904: subcellular location). | A: Use UniProt localization as biological context, but do not claim an HPA-validated IF pattern or transfer the IHC result into an IF protocol (HPA: subcellular record; tissue IHC). Consult the separate IF/ICC guide for that application. |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Enhanced — High consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Testis | Pachytene spermatocytes | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Adrenal gland | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Appendix | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | Not detected | Protein (IHC) | HPA → |
| Breast | Adipocytes | Not detected | Protein (IHC) | HPA → |
Use the catalog antibody’s paraffin section workflow as a starting point, then assess staining against DAZL’s reported testis expression and changing subcellular location.
The IHC-validated DAZL antibody has real staining images from human, mouse, and rat paraffin-embedded testis cancer sections (catalog IHC image captions).
A02069-2 is the sole card and has IHC images from human, mouse, and rat paraffin-embedded testis cancer sections (catalog IHC image captions). Its listed applications include IHC, while IF/ICC validation and IF images are absent from the payload (catalog applications; catalog IF image alts).
Which to pick: For tissue IHC, choose A02069-2: its own images show staining of paraffin-embedded sections, and its listed IHC concentration is 0.5–1 μg/ml (catalog IHC image captions; catalog IHC dilution). For IF/ICC? No SKU in this payload has IF validation or an IF figure; use the separate IF/ICC guide for that application (catalog applications; catalog IF image alts). For cross-species IHC, A02069-2 has human, mouse, and rat reactivity and corresponding IHC images; the captions do not report the fixative (catalog reactivity; catalog IHC image captions).