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- Table of Contents
Plan ENAH staining in paraffin sections using the IHC-validated antibody. This guide covers tissue patterns, fixation, antigen retrieval, detection and interpretation.
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Cytoplasm in breast myoepithelial cells; membrane in pancreatic ducts (HPA tissue IHC) | |
| Staining pattern | Breast myoepithelial/prostate basal cytoplasm; pancreatic duct membrane (HPA tissue IHC) | |
| Antigen retrieval | EDTA pH 8.0 HIER, heat-mediated (datasheet A05337-2) | |
| Positive control | Adrenal gland+4 more · see all | |
| Negative control | None in HPA (detected in all 45 tissues); use no-primary + isotype controls |
| Fixation | Keep fixation conditions consistent across sections. (standard IHC practice; not target-specific) | |
| Caveat | Staining has medium agreement with RNA expression (HPA tissue IHC) | |
| Regulation | Overexpressed in most primary breast tumors (UniProt) | |
| Isoform / epitope | 3 isoforms; check epitope coverage across variants (UniProt) |
The catalog antibody has an IHC-P protocol (datasheet A05337-2). The published protocols below cover gastric cancer and oral squamous cell carcinoma tissue (PMC5641146; PMC11545229).
| Sample | Paraffin-embedded human liver cancer tissue; fixative not specified (datasheet A05337-2) |
| Fixation | Image fixative and duration unreported (datasheet A05337-2); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: EDTA pH 8.0 (datasheet A05337-2); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A05337-2) |
| Primary antibody | Rabbit anti-ENAH, 2-5 μg/ml (datasheet A05337-2) |
| Primary incubation | Overnight at 4 °C (datasheet A05337-2) |
| Detection | Streptavidin-biotin complex (SABC), DAB chromogen (datasheet A05337-2) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | ENAH-positive staining in glandular cells of adrenal gland (HPA tissue IHC: High). HPA tissue profile: Cytoplasmic expression in several tissues including breast myoepithelial cells, basal prostate epithelium and membranous expression in pancreatic acinar duct epithelium. No signal in the no-primary control. |
ENAH is a cytoplasmic, actin-associated protein found at cell projections and focal adhesions; it has no transmembrane segment (UniProt Q8N8S7). In paraffin sections, expect staining in glandular and epithelial cells, including endometrial glands and breast myoepithelial cells (HPA tissue IHC). HPA rates the tissue IHC evidence Enhanced, while reporting medium consistency between staining and RNA expression (HPA tissue IHC).
| Strong cytoplasmic staining in endometrial glandular cells. | This fits an HPA high-staining cell population and ENAH’s cytoplasmic location (HPA tissue IHC; UniProt Q8N8S7). Judge the pattern within the identified glands, since HPA reports staining by cell type rather than treating every cell in a section as equally positive (HPA tissue IHC). |
| A membrane-associated edge or focal pattern accompanies cytoplasmic staining. | This can fit ENAH at cell projections and focal adhesions (UniProt Q8N8S7). HPA also describes membranous staining in pancreatic acinar duct epithelium (HPA tissue IHC). The exact edge pattern can be harder to resolve with chromogenic IHC than with ICC-IF (general IHC/IF practice). |
| Staining is predominantly nuclear, with little cytoplasmic signal. | Treat this as a compartment mismatch requiring verification: the supplied localisation records place ENAH in cytoplasm, projections and adhesions, and report no nuclear location (UniProt Q8N8S7; HPA subcellular). Review morphology and controls before assigning the nuclear signal to ENAH (general IHC practice). |
| The strongest signal appears in an unexpected cell population, or broadly across the section. | Check whether the cells match the reported tissue pattern before scoring them as positive (HPA tissue IHC). Unexpected staining can reflect cross-reactivity or endogenous detection activity; an omitted-primary control can help assess detection-system background (general IHC practice). |
| Endometrial glandular cells show no discernible staining. | These cells are listed as high staining, so a blank result warrants a technical check, though HPA’s Enhanced rating is not a guarantee for every specimen (HPA tissue IHC). Review tissue identity, morphology and the antibody’s IHC-P procedure, then examine positive and omitted-primary controls (general IHC practice). |
| Cell compartment and topology | ENAH is cytoplasmic and associated with projections and focal adhesions, without a transmembrane segment (UniProt Q8N8S7). Thus, a membrane-associated pattern should be interpreted alongside cell identity and cytoplasmic staining; membrane colour alone does not establish a transmembrane target (UniProt Q8N8S7; general IHC practice). |
| Choice of tissue and cell population | HPA reports high staining in endometrial glandular cells and several other glandular or epithelial populations, but low staining in cardiomyocytes and skeletal myocytes (HPA tissue IHC). Low is not absent: neither low-staining tissue is established here as a true negative control (HPA tissue IHC). |
| Antibody validation | HPA028448 and HPA028696 each have an Enhanced IHC rating (HPA antibodies). That supports use of their reported patterns as a reference, while HPA’s medium staining–RNA consistency warrants checking the actual cell pattern and controls in each run (HPA tissue IHC; general IHC practice). |
| Isoforms and epitope coverage | UniProt lists three ENAH isoforms (UniProt Q8N8S7). The supplied records do not identify this catalog antibody’s epitope or its recognition of each isoform; a missing signal cannot be assigned to isoform choice from these records alone (UniProt Q8N8S7; supplied antibody evidence). |
| Antigen retrieval | Retrieval is a general paraffin-section workflow variable; follow the IHC-validated antibody’s documented conditions and compare controls when adjusting it (general IHC practice). The supplied HPA and UniProt records do not establish an ENAH-specific fixation effect or retrieval requirement (HPA tissue IHC; UniProt Q8N8S7). |
| Q: Does ICC-IF localisation define the IHC protocol? | A: No. ICC-IF places ENAH at plasma membrane, focal adhesion sites and cytosol, providing a compartment check (HPA subcellular). It does not supply paraffin-section conditions; use the catalog antibody’s IHC-P procedure for the IHC workflow (HPA subcellular; general IHC practice). |
| Situation | Likely cause | Next action |
|---|---|---|
| Known high-staining glandular cells are blank. | An assay or specimen problem is possible; HPA reports high staining in endometrial glandular cells (HPA tissue IHC). | Target-specific fixation effects are not established by the supplied assay evidence. Verify with a matched IHC source before attributing a result to fixation. |
| Nuclear signal dominates the slide. | The pattern conflicts with the reported cytoplasmic, projection and adhesion locations (UniProt Q8N8S7; HPA subcellular). | Inspect an omitted-primary control and repeat with the IHC-validated antibody’s documented conditions; score nuclear-only colour cautiously until its source is resolved (general IHC practice). |
| Colour is diffuse across tissue or appears in the omitted-primary control. | Nonspecific detection or endogenous enzyme activity may contribute to chromogenic background (general IHC practice). | Review blocking, washes, detection chemistry and endogenous-activity quenching appropriate to the detection system; compare the control with identified positive cells (general IHC practice; HPA tissue IHC). |
| An unexpected cell type stains more strongly than the expected population. | Cell identification may be wrong, or staining may reflect cross-reactivity or endogenous detection activity (general IHC practice). | Recheck morphology and the tissue-specific HPA cell assignments; compare an omitted-primary control and, if available, staining from an independently validated ENAH antibody (HPA tissue IHC; HPA antibodies; general IHC practice). |
| Low-staining muscle cells show faint colour. | HPA lists cardiomyocytes and skeletal myocytes as low, so faint signal alone does not establish an artefact or a negative-control failure (HPA tissue IHC). | Assess localisation, morphology and control background before scoring; reserve a true negative designation for a control established by the assay (HPA tissue IHC; general IHC practice). |
| IHC seems less sharply peripheral than an ICC-IF image. | ICC-IF resolves plasma membrane and focal adhesion sites, while chromogenic tissue sections may show those details less clearly (HPA subcellular; general IHC/IF practice). | Judge the IHC result against its cell-specific tissue pattern and controls, and use ICC-IF localisation only as supporting context (HPA tissue IHC; HPA subcellular; general IHC practice). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Enhanced — Medium consistency between antibody staining and RNA expression data. External characterization data supports antibody staining.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adrenal gland | Glandular cells | High | Protein (IHC) | HPA → |
| Cerebellum | Bergmann glia - cytoplasm/membrane | High | Protein (IHC) | HPA → |
| Duodenum | Glandular cells | High | Protein (IHC) | HPA → |
| Endometrium | Glandular cells | High | Protein (IHC) | HPA → |
| Epididymis | Glandular cells | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| None in HPA: ENAH is detected in all 45 scored tissues. Use a no-primary (secondary-only) and an isotype control instead. | ||||
Troubleshoot ENAH chromogenic IHC in paraffin sections by checking retrieval, cell type, subcellular pattern and scoring before interpreting staining.
A05337-2 has human paraffin-section IHC images and an A431-cell IF image (catalog image captions); listed reactivity spans Human, Mouse, and Rat (catalog reactivity).
A05337-2 has IHC images from paraffin-embedded human liver cancer, ovarian serous adenocarcinoma, and renal pelvis squamous metaplasia tissue (catalog IHC captions). A05337-2 has an IF image in A431 cells and lists both IF and ICC applications (catalog IF caption; catalog applications).
Which to pick: For tissue IHC, choose A05337-2: its human paraffin-section captions document EDTA retrieval at pH 8.0 and 2 μg/ml primary antibody; the fixative is unreported (catalog IHC captions). For IF/ICC, A05337-2 lists both applications and has an A431-cell IF image (catalog applications; catalog IF caption). For cross-species work, A05337-2 lists Human, Mouse, and Rat reactivity, but the supplied IHC images show human tissue only; clone information is unreported (catalog reactivity; catalog IHC captions; catalog clone field).