FLG / Filaggrin · Western blot design guide

Design a Western Blot for FLG

Real validated FLG Western blot protocols, expected-band and isoform facts, troubleshooting for weak or shifted signal, and recommended anti-FLG WB antibodies. Everything you need to plan the experiment before you commit precious samples.

Evidence assembled September 2026 · For research use; verify linked source records and product datasheet before use
Western blot protocol sheet for FLG: expected band ~435.2 kDa, hero antibody PB9870, catalog values and labelled standard workflow; separate PMC comparisons on the guide
Printable FLG Western blot protocol sheet — expected band ~435.2 kDa, antibody PB9870, controls and PMC citations. Open the full FLG WB guide →

FLG Western Blot Experimental Design Guide

Expected bands, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.

Must know before running
Expected band ~435.2 kDa
Observed band ~435 kDa
Gel 5–20% (catalog PB9870)
Positive control ⓘ Skin (IHC candidate; verify WB) +4 more
Negative control ⓘ Adipose tissue (IHC candidate; verify WB)
Important caveats
Reasons your observed band may differ from the expected size.
PTM Phosphorylated
Caveat Phosphorylation-state controls
Gene-set association MSigDB C7 membership
Isoform 1 isoform(s)
Section 1

Real Curated FLG Western Blot Protocols

The PB9870 protocol combines labelled catalog values with standard starting conditions. Published comparisons retain their own sample, reagent and detection scope.

Recommended Western blot protocol parameters
Sample / lysate22RV1 (catalog PB9870)
Gel %5–20% (catalog PB9870)
Load30 ug; reducing conditions (catalog PB9870)
Transfera nitrocellulose membrane at 150 mA for 50-90 minutes (catalog PB9870)
Membranenitrocellulose membrane (catalog PB9870)
Blocking5% non-fat milk/TBS for 1.5 hour at RT (catalog PB9870)
Primary antibodyPB9870 · 0.5 μg/mL (catalog PB9870)
Primary incubationovernight at 4°C (catalog PB9870)
Secondary antibodygoat anti-rabbit IgG-HRP, 1:5000 (catalog PB9870)
Secondary incubation1.5 hour at RT (catalog PB9870)
WashTBS-0.1%Tween 3 times with 5 minutes each (catalog PB9870)
DetectionECL (catalog PB9870)
Section 2

What Is the Expected FLG Western Blot Band Size?

FLG is predicted at 435.2 kDa and observed near 435 kDa; no migration difference requiring explanation is established.

What am I looking at on my blot?
Band near 435 kDaConsistent with full-length FLG; confirm identity with antibody controls
No band near 435 kDaFLG is undetected; check sample suitability and extraction
Band above 435 kDaDoes not match the documented full-length band; confirm identity
Band below 435 kDaDoes not match the documented full-length band; confirm identity
💡Expected FLG appearanceFLG is predicted at 435.2 kDa and has an empirical band near 435 kDa; confirm band identity with ordinary antibody controls.
How each factor affects band size
UniProt predicted mass of 435.2 kDaSets the expected position of full-length FLG
Predicted full-length massCorresponds closely to the observed 435 kDa band
UniProt mass of 435170 DaExpresses the same full-length prediction as 435.2 kDa
Predicted mass compared with the observed bandShows no established migration difference from 435 kDa
Why is my band missing or off?
SituationLikely causeNext action
No band in lysateFLG in keratohyalin granules may be absent from the sampled cells or poorly extractedUse a granular keratinocyte positive control and check extraction
Band higher than expectedNo size-increasing mechanism is established by the supplied featuresCheck the molecular weight marker and confirm identity with another antibody
Band lower than expectedNo smaller FLG species is established by the supplied featuresCheck sample integrity and confirm identity with another antibody
Multiple bandsAdditional bands have no established identity in the supplied evidenceCompare with an antibody control and check sample integrity
Weak or no signalThe sample may contain few FLG-expressing granular keratinocytesUse a skin positive control and check extraction

Sample controls for FLG Western blot

🧪HPA-IHC candidate guidance (verify in WB): For positive controls for FLG in Western blot, you can use skin tissue.
Positive control: Skin (IHC candidate; verify WB)
Negative control: Adipose tissue (IHC candidate; verify WB)
Loading controls: Run GAPDH, β-actin, and a total-protein stain alongside the samples.
⚠️Feasibility: FLG is localized to epidermal keratohyalin granules, so skin samples need to contain epidermis for reliable detection.

HPA tissue expression evidence for FLG

Comprehensive Human Protein Atlas IHC scoring per tissue. Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.

Higher expression tissues · candidate positive controls from IHC

TissueCell typeLevelEvidenceSource
Skin cells in granular layer High Protein (IHC) HPA →
Esophagus squamous epithelial cells Medium Protein (IHC) HPA →
Oral mucosa squamous epithelial cells Medium Protein (IHC) HPA →
Tonsil squamous epithelial cells Medium Protein (IHC) HPA →
Vagina squamous epithelial cells Medium Protein (IHC) HPA →

Lower expression tissues · IHC evidence, not confirmed WB-negative controls

TissueCell typeLevelEvidenceSource
Adipose tissue adipocytes Not detected Protein (IHC) HPA →
Adrenal gland glandular cells Not detected Protein (IHC) HPA →
Appendix glandular cells Not detected Protein (IHC) HPA →
Bone marrow hematopoietic cells Not detected Protein (IHC) HPA →
Breast adipocytes Not detected Protein (IHC) HPA →
Section 3

Advanced FLG Western Blot Tips

Deeper troubleshooting and optimisation questions for FLG, answered from its protein features.

How should FLG band migration be interpreted?
Band shift · Use the separately labelled calculated mass and catalog-observed evidence above. A sequence annotation does not establish an observed migration shift. Verify target identity with orthogonal controls.
Do FLG isoforms explain multiple bands?
Isoforms · The supplied record lists one isoform and no alternative sequence. It therefore provides no annotated isoform explanation for multiple bands. Compare each band with the approximately 435 kDa full-length candidate before assigning an identity.
Could FLG modifications alter its band position?
PTM · FLG has phosphoprotein and citrullination keywords, but the supplied record lists no modified residues or glycosylation sites. These keywords alone cannot predict a visible shift or assign an unexpected band to a modification.
Does this guide establish induction of FLG?
Induction · No general induction response is established by this guide. A pathway or gene-set association is not evidence of induction in a particular specimen. Verify the relevant treatment and control in a target-specific experiment.
What transfer method to use for FLG Western blot?
Transfer · FLG is 4,061 residues with a predicted mass of 435.2 kDa. Choose and check a transfer setup suitable for very large proteins, and confirm that protein leaves the gel and reaches the membrane. The supplied features do not specify a particular membrane or transfer method.
How should blocking be optimized?
Blocking · Standard workflow guidance: follow the PB9870 datasheet where specified. Otherwise compare 5% milk or 5% BSA in TBST; for a phospho-specific assay start with BSA. Optimize background and specific signal with matched controls.
How should FLG be quantified?
Quantitation · Standard workflow guidance: quantify only a validated target band within the linear exposure range. Use consistent sample preparation and loading, retain biological replicates, and avoid interpreting saturation or loading differences as regulation.
Should FLG appear at its predicted molecular mass?
Interpretation · The supplied predicted mass is 435.2 kDa, close to the reported apparent band at approximately 435 kDa. Use that region to identify the full-length candidate; the supplied features do not establish a band shift.

FLG contains repeated sequence, so an antibody could recognize related regions within the protein. The record also notes colocalization with CAPN1, but does not establish cleavage. Treat smaller bands as unidentified until antibody specificity or independent evidence supports an assignment.

The supplied localization places FLG in keratohyalin granules of the epidermal stratum granulosum and notes it in granular keratinocytes and lower corneocytes. Use a sample containing these cell populations when assessing FLG expression.

Use the same approximately 435 kDa band for comparisons and account for differences in the abundance of granular keratinocytes or lower corneocytes between samples. The supplied localization makes cell composition relevant to interpreting band intensity.
Boster reagents

FLG Western Blot Antibodies

Catalog antibodies with Western blot application and product-specific WB images. Evaluate suitability with the reported sample, controls and experimental conditions.

Real WB data Western blot analysis of Filaggrin using anti-Filaggrin antibody (PB9870). Electrophoresis was performed on a 5-20% SDS-PAGE gel at 70V (Stacking gel) / 90V (Resolving gel) for 2-3 hours. The sample well of each lane was loaded with 30 ug of sample under reducing conditions. Lane 1: 22RV1 whole cell lysates. After electrophoresis, proteins were transferred to a nitrocellulose membrane at 150 mA for 50-90 minutes. Blocked the membrane with 5% non-fat milk/TBS for 1.5 hour at RT. The membrane was incubated with rabbit anti-Filaggrin antigen affinity purified polyclonal antibody (Catalog # PB9870) at 0.5 μg/mL overnight at 4°C, then washed with TBS-0.1%Tween 3 times with 5 minutes each and probed with a goat anti-rabbit IgG-HRP secondary antibody at a dilution of 1:5000 for 1.5 hour at RT. The signal is developed using an Enhanced Chemiluminescent detection (ECL) kit (Catalog # EK1002) with Tanon 5200 system. A specific band was detected for Filaggrin at approximately 435 kDa. The expected band size for Filaggrin is at 435 kDa.
Anti-Filaggrin/FLG Antibody Picoband®
Cat # PB9870

PB9870 is listed as human reactive and has a Western blot image using reducing 22RV1 whole cell lysate, with a reported FLG band near 435 kDa. No independent publication evidence is supplied.

Which to pick: PB9870 is the only listed option. Its Western blot example used 30 µg of 22RV1 lysate and 0.5 µg/mL primary antibody; use that context when planning a human FLG blot.

Source: BosterBio FLG gene-info card — filtered to Western-blot-capable antibodies; each card shows that product's actual WB validation figure.