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- Table of Contents
Plan chromogenic HSPB1 IHC in paraffin sections using esophageal squamous epithelium as a high-staining reference (HPA tissue IHC). This guide covers expected localisation, fixation, controls and interpretation.
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Cytoplasmic staining in squamous epithelium (HPA tissue IHC) | |
| Staining pattern | Squamous epithelial cells show cytoplasmic staining (HPA tissue IHC) | |
| Antigen retrieval | Citrate pH 6 HIER, heat-mediated (datasheet M00676-5) | |
| Positive control | Bronchus+4 more · see all | |
| Negative control | Appendix+4 more · see all |
| Fixation | Keep fixation consistent across paraffin sections. (standard IHC practice; not target-specific) | |
| Caveat | Heat shock can shift HSPB1 into nuclei (UniProt) | |
| Regulation | Highest levels in heart and muscle tissues (UniProt) | |
| Isoform / epitope | No annotated isoforms; full-length 1–205 chain (UniProt) |
The catalog antibody’s IHC-P protocol (datasheet: M00676-5) is accompanied by four published HSPB1 IHC protocols (PMC12972742; PMC4502388; PMC5370501; PMC4427334).
| Sample | Paraffin-embedded human lung cancer tissues; fixative not specified (datasheet M00676-5) |
| Fixation | Image fixative and duration unreported (datasheet M00676-5); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: Citrate pH 6, 20 min (datasheet M00676-5) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet M00676-5) |
| Primary antibody | Mouse monoclonal (clone 3H3) anti-HSPB1, 0.5-1μg/ml (datasheet M00676-5) |
| Primary incubation | Overnight at 4 °C (datasheet M00676-5) |
| Detection | Streptavidin-biotin complex (SABC), DAB chromogen (datasheet M00676-5) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | HSPB1-positive staining in respiratory epithelial cells of bronchus (HPA tissue IHC: High). HPA tissue profile: Cytoplasmic expression mainly in squamous epithelial cells. No signal in the no-primary control. |
In paraffin-section IHC, expect HSPB1 mainly in the cytoplasm of squamous epithelial cells, with high staining in esophageal squamous epithelium and heart cardiomyocytes (HPA: tissue IHC, Enhanced reliability). UniProt places HSPB1 in the cytoplasm during interphase and also reports nuclear localization under heat stress (UniProt P04792: subcellular location). It has no transmembrane segment (UniProt P04792: topology).
| Strong cytoplasmic staining in esophageal squamous epithelial cells or heart cardiomyocytes, with identifiable cell boundaries (HPA: High in both cell types). | This matches reported positive cell types and the predominant tissue-IHC compartment (HPA: tissue IHC). Judge the named cells, since a tissue section also contains other cell populations whose staining may differ. |
| Predominantly nuclear staining in otherwise unstressed cells, with little cytoplasmic signal (UniProt P04792: cytoplasmic in interphase). | Review specificity and staining conditions before accepting this as the expected IHC pattern (HPA: mainly cytoplasmic tissue IHC). Nuclear HSPB1 can occur during heat shock, so nuclear signal alone cannot establish an artefact (UniProt P04792: heat-shock translocation). |
| Staining appears in a cell population reported as not detected, such as appendix endocrine cells or lymph-node germinal-center cells (HPA: Not detected). | Consider cross-reactivity or endogenous chromogenic activity, then inspect morphology and controls (standard IHC practice). The HPA calls apply to those cell types; they do not make every cell in either tissue a negative control (HPA: tissue IHC). |
| Uniform color covers cells and surrounding tissue without a readable cytoplasmic pattern. | Diffuse background obscures the compartment and cannot be scored as HSPB1-positive staining (standard IHC practice). Compare a no-primary control and check blocking, washes, and detection chemistry before interpreting the section (standard IHC practice). |
| Esophageal squamous epithelial cells show no signal, despite being a reported high-staining population (HPA: High in esophagus). | Treat the run as unresolved until controls and processing are checked (standard IHC practice). An absent signal could reflect assay performance; the HPA observation alone does not identify a cause or establish HSPB1-specific fixation sensitivity. |
| Compartment and cell state (UniProt P04792: subcellular location). | Cytoplasmic localization is expected in interphase; spindle colocalization is reported in mitosis, and nuclear translocation during heat shock. Interpret unusual nuclear signal with the cell state in mind, while using the mainly cytoplasmic tissue-IHC profile as the routine reference (HPA: tissue IHC). |
| Choice of comparison cells (HPA: tissue IHC). | Esophageal squamous epithelial cells and heart cardiomyocytes are reported High; appendix endocrine cells and lymph-node germinal-center cells are Not detected. Compare the specified populations rather than labeling an entire section positive or negative (HPA: cell-level observations). |
| Evidence behind the reference pattern (HPA: Enhanced tissue-IHC reliability). | HPA reports high consistency between antibody staining and RNA expression, and lists IHC Enhanced status for HPA000497, CAB004439, and CAB047331 (HPA: tissue IHC; antibody validation). These are reference-pattern findings, not validation of an unspecified catalog antibody. |
| IF/ICC Q: should membrane or cytosolic fluorescence change the IHC call? | A: HPA reports enhanced plasma-membrane and cytosol localization in ICC-IF (HPA: subcellular). Use that as IF/ICC context; the paraffin-section IHC reference remains mainly cytoplasmic expression in squamous epithelium (HPA: tissue IHC). |
| Situation | Likely cause | Next action |
|---|---|---|
| Known-positive esophageal squamous cells are blank (HPA: High in esophagus). | The section or staining run may have failed; this observation does not establish a target-specific fixation effect. | Check section integrity, primary-antibody application, detection reagents, and a concurrently stained positive control (standard IHC practice). Repeat with documented retrieval and incubation settings if a run-level fault is found. |
| The whole slide shows weak, diffuse chromogen rather than distinct cytoplasm. | Background from nonspecific binding or detection chemistry may hide the expected cell pattern (standard IHC practice; HPA: mainly cytoplasmic). | Inspect the no-primary control, blocking step, washes, and chromogen development; adjust the general staining workflow before scoring (standard IHC practice). |
| A supposedly negative tissue shows scattered positive cells. | The selected HPA negative call may describe only one cell type, such as appendix endocrine cells (HPA: Not detected), while other cells remain unevaluated by that call. | Identify stained cells by morphology and compare the exact HPA cell population. Use a no-primary control to assess nonspecific detection (standard IHC practice). |
| Signal is predominantly nuclear across interphase cells. | This differs from the mainly cytoplasmic tissue-IHC profile, although stress-related nuclear translocation is reported (HPA: tissue IHC; UniProt P04792: subcellular location). | Confirm cell morphology and compare a known-positive section and no-primary control. Report the nuclear pattern separately rather than assigning it the routine cytoplasmic call (standard IHC practice). |
| Chromogen outlines membranes but cytoplasm is hard to see. | HPA reports plasma-membrane localization in ICC-IF; that assay does not establish a membrane-dominant paraffin-section IHC pattern (HPA: subcellular; tissue IHC). | Check focus, counterstain, and cellular boundaries, then compare with the cytoplasmic IHC reference and controls before scoring (HPA: tissue IHC; standard IHC practice). |
| A catalog antibody produces a pattern unlike the HPA reference. | HPA's Enhanced assessment applies to its reported tissue pattern and listed antibodies; it does not validate an unspecified catalog antibody (HPA: antibody validation). | Review that antibody's IHC-P validation and its documented conditions; compare positive cells, no-primary control, and the HPA cell-level pattern before interpreting discrepant staining (standard IHC practice; HPA: tissue IHC). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Enhanced — High consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Bronchus | Respiratory epithelial cells | High | Protein (IHC) | HPA → |
| Endometrium | Glandular cells | High | Protein (IHC) | HPA → |
| Epididymis | Glandular cells | High | Protein (IHC) | HPA → |
| Esophagus | Squamous epithelial cells | High | Protein (IHC) | HPA → |
| Fallopian tube | Glandular cells | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Appendix | Endocrine cells | Not detected | Protein (IHC) | HPA → |
| Caudate | Glial cells | Not detected | Protein (IHC) | HPA → |
| Cerebral cortex | Endothelial cells | Not detected | Protein (IHC) | HPA → |
| Hippocampus | Glial cells | Not detected | Protein (IHC) | HPA → |
| Lymph node | Germinal center cells | Not detected | Protein (IHC) | HPA → |
Use the catalog antibody’s paraffin section evidence to troubleshoot HSPB1 staining, then assess signal by cell type, compartment and tissue quality.
Three anti-HSPB1 antibodies have paraffin-section IHC images from human tissues (catalog IHC captions); M00676-2 also has a rat-tissue image, while M00676-5 and PB9237 have IF/ICC images (catalog image captions).
M00676-5 has a human lung cancer paraffin-section IHC image and an IF/ICC cell image (catalog image captions); PB9237 has a human intestinal cancer paraffin-section IHC image and an IF/ICC cell image (catalog image captions). M00676-2 has human colon cancer and rat stomach paraffin-section IHC images; its application list also includes IF/ICC (catalog IHC captions; catalog applications).
Which to pick: For human paraffin-section IHC, choose M00676-5 or PB9237 when citrate retrieval at pH 6 matches your workflow; each caption reports that retrieval and 1 μg/ml primary antibody (catalog IHC captions). For IF/ICC, M00676-5 and PB9237 each have a cell image at 2 μg/ml (catalog IF captions); for human, mouse or rat work, M00676-2 lists all three species and has human and rat IHC images with EDTA retrieval at pH 8 (catalog reactivity; catalog IHC captions). The paraffin-section captions do not report the fixative (catalog IHC captions).