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- Table of Contents
Plan HYOU1 staining in paraffin sections using its observed cytoplasmic tissue pattern and expected ER localisation (HPA tissue IHC; UniProt). Use pancreatic exocrine cells as a high-staining reference, while accounting for the reported low consistency between antibody staining and RNA expression (HPA tissue IHC).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Mainly cytoplasmic in tissue (HPA tissue IHC); ER lumen expected (UniProt) | |
| Staining pattern | Cytoplasmic staining in pancreatic exocrine cells (HPA tissue IHC) | |
| Antigen retrieval | EDTA pH 8.0 HIER, heat-mediated (datasheet A04934-2) | |
| Positive control | Pancreas+4 more · see all | |
| Negative control | Adipose tissue+4 more · see all |
| Fixation | Keep fixation consistent across paraffin sections. (standard IHC practice; not target-specific) | |
| Caveat | Staining has low consistency with RNA expression (HPA tissue IHC) | |
| Regulation | Up-regulated by hypoxia (UniProt) | |
| Isoform / epitope | 2 isoforms; check epitope coverage for each (UniProt) |
The catalog antibody’s IHC-P protocol (datasheet A04934-2) is accompanied by one published nasopharyngeal carcinoma IHC protocol (PMC4749358).
| Sample | Paraffin-embedded human gall bladder adenosquamous carcinoma tissue; fixative not specified (datasheet A04934-2) |
| Fixation | Image fixative and duration unreported (datasheet A04934-2); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: EDTA pH 8.0 (datasheet A04934-2); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A04934-2) |
| Primary antibody | Rabbit anti-HYOU1, 1-2 μg/ml (datasheet A04934-2) |
| Primary incubation | Overnight at 4 °C (datasheet A04934-2) |
| Detection | Streptavidin-biotin complex (SABC), DAB chromogen (datasheet A04934-2) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | HYOU1-positive staining in exocrine glandular cells of pancreas (HPA tissue IHC: High). HPA tissue profile: Mainly cytoplasmic expression in several different tissue types. No signal in the no-primary control. |
HYOU1 is a soluble endoplasmic reticulum lumen protein with no transmembrane segment (UniProt Q9Y4L1 topology). In paraffin section IHC, expect mainly cytoplasmic staining, especially in pancreatic exocrine glandular cells, where HPA reports high staining (HPA tissue IHC). Interpret that expectation cautiously: HPA rates the tissue staining Approved but reports low consistency between antibody staining and RNA expression data (HPA tissue IHC).
| Pancreatic exocrine glandular cells show strong cytoplasmic chromogen, while nearby cells vary in intensity. | This fits the clearest listed positive tissue and the mainly cytoplasmic tissue profile (HPA tissue IHC: high in pancreatic exocrine glandular cells). Variation between cells need not invalidate the section; evaluate the expected cell population and compartment before assigning a score. |
| The dominant signal is nuclear, membranous, or restricted to an unexpected compartment. | That pattern conflicts with an ER lumen protein seen mainly as cytoplasmic staining in tissue IHC (UniProt Q9Y4L1 topology; HPA tissue IHC). Treat it as a possible staining artefact and check the antibody and detection controls before calling it HYOU1. |
| Prominent staining appears in cells listed as undetected, such as adipocytes in adipose tissue. | This conflicts with that specific HPA observation and may reflect cross-reactivity or endogenous detection activity (HPA tissue IHC: adipocytes not detected; general IHC practice). It does not establish that every adipocyte in every specimen lacks HYOU1; compare a control section and review cellular morphology. |
| Chromogen covers stroma, empty spaces, and many cell types with little cellular contrast. | A diffuse deposit cannot be assigned confidently to the reported cytoplasmic pattern (HPA tissue IHC). In chromogenic IHC, inadequate blocking, nonspecific antibody binding, or detection background can produce this appearance (general IHC practice); judge the section against a negative control. |
| Pancreatic exocrine glandular cells show no convincing signal. | The expected high staining is absent (HPA tissue IHC: pancreatic exocrine glandular cells high). First check tissue preservation and whether a separate positive control stained; then review retrieval, antibody application, and detection steps (general IHC practice). A single blank section does not establish biological absence. |
| Compartment and topology | HYOU1 is assigned to the ER lumen and has no transmembrane segment (UniProt Q9Y4L1 topology). In tissue IHC, HPA describes mainly cytoplasmic expression; interpret chromogen as a compartment-level pattern, not proof that individual ER structures are resolved (HPA tissue IHC; general IHC practice). |
| Tissue and cell context | HPA reports high staining in pancreatic exocrine glandular cells and medium staining in several neuronal and glandular populations (HPA tissue IHC). Select and score the named cell population: a tissue label alone does not predict equal staining in every cell. |
| Strength of the tissue evidence | The listed antibody HPA049296 has IHC status Approved; HPA also notes low consistency between antibody staining and RNA data (HPA antibody validation; HPA tissue IHC). Use the observed staining pattern as a working expectation and require appropriate controls for a new specimen. |
| IF/ICC expectation? | An ER lumen location suggests an intracellular signal if HYOU1 is specifically detected (UniProt Q9Y4L1 topology). HPA provides no main ICC-IF location or cell-line images in this payload, and lists no ICC status for HPA049296 (HPA subcellular; HPA antibody validation). The tissue IHC pattern alone cannot validate an IF/ICC result. |
| Situation | Likely cause | Next action |
|---|---|---|
| Pancreatic exocrine glands are blank. | The expected high-staining population is absent from the readout (HPA tissue IHC); a failed staining run is one possible cause (general IHC practice). | Confirm the exocrine cells are present, inspect a separate positive control, then review antigen retrieval, antibody application, and detection in the run (general IHC practice). |
| Only nuclei or cell borders stain strongly. | The dominant compartment disagrees with ER lumen localisation and the mainly cytoplasmic tissue profile (UniProt Q9Y4L1 topology; HPA tissue IHC). | Compare control sections and reassess staining localisation under higher magnification before scoring HYOU1 (general IHC practice). |
| Adipocytes or other HPA-undetected cells stain strongly. | Cross-reactivity or endogenous detection activity is possible (HPA tissue IHC: adipocytes not detected; general IHC practice). | Check a negative control and the detection system; record the exact cell population rather than treating the whole tissue as positive (general IHC practice). |
| Diffuse colour obscures cell boundaries. | Nonspecific binding or detection background can obscure a cellular pattern (general IHC practice). | Review blocking, washing, antibody concentration, and detection timing against a negative control (general IHC practice). |
| A medium-staining tissue appears weaker than pancreas. | Different intensity is consistent with the supplied HPA levels, such as medium in cerebral cortical neurons versus high in pancreatic exocrine cells (HPA tissue IHC). | Score the specified cell types separately and compare sections processed in the same run before interpreting the difference (general IHC practice). |
| An IF/ICC image seems to show HYOU1 at the plasma membrane. | That location conflicts with the ER lumen assignment; this payload contains no HPA ICC-IF images or validated ICC location to resolve it (UniProt Q9Y4L1 topology; HPA subcellular). | Treat the IF/ICC localisation as unconfirmed and evaluate it with appropriate imaging and antibody controls in its separate guide (general IF practice). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Approved — Low consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Pancreas | Exocrine glandular cells | High | Protein (IHC) | HPA → |
| Cerebral cortex | Neuronal cells | Medium | Protein (IHC) | HPA → |
| Duodenum | Glandular cells | Medium | Protein (IHC) | HPA → |
| Hippocampus | Neuronal cells | Medium | Protein (IHC) | HPA → |
| Seminal vesicle | Glandular cells | Medium | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Adrenal gland | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Appendix | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | Not detected | Protein (IHC) | HPA → |
| Breast | Adipocytes | Not detected | Protein (IHC) | HPA → |
These questions address chromogenic HYOU1 staining in paraffin sections, with one entry on IF/ICC and attention to its ER localisation (UniProt Q9Y4L1).
A04934-2 has human paraffin-section IHC images and a CACO-2 IF/ICC image (catalog image captions); its listed reactivity also includes Mouse and Rat (catalog: reactivity).
A04934-2 is the SKU with a rendered IHC card, showing human gall bladder adenosquamous carcinoma in a paraffin section (catalog IHC image caption); its IF/ICC image shows CACO-2 cells (catalog IF image caption). M04934-2 lists IHC and Human, Mouse, Rat reactivity, but has no IHC or IF figure in the payload (catalog: applications/reactivity/image alts).
Which to pick: For tissue IHC, choose A04934-2 when a paraffin-section example is useful (catalog IHC image caption); the caption does not report the fixative (catalog IHC image caption). For IF/ICC, choose A04934-2 because it lists both applications and has a CACO-2 IF image (catalog: applications/IF image caption). Both SKUs list Human, Mouse, Rat reactivity; A04934-2 has pictured human IHC and IF data, while M04934-2 is monoclonal clone 19H99 with IHC listed but no accompanying figure (catalog: reactivity/clone/image alts).