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- Table of Contents
Plan IGF2BP2 paraffin IHC around mainly cytoplasmic tissue staining (HPA tissue IHC). This guide covers fixation consistency, controls and scoring with an IHC-validated antibody at 1:50 (datasheet: M02010-1).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Mainly cytoplasmic in tissue IHC (HPA tissue IHC) | |
| Staining pattern | Mainly cytoplasmic; high in several glandular tissues (HPA tissue IHC) | |
| Antigen retrieval | EDTA pH 8.0 HIER, heat-mediated (datasheet M02010-1) | |
| Positive control | Adrenal gland+4 more · see all | |
| Negative control | None in HPA (detected in all 45 tissues); use no-primary + isotype controls |
| Fixation | Keep fixation consistent across compared paraffin sections. (selected-SKU IHC image M02010-1) | |
| Caveat | Staining and RNA expression show medium consistency (HPA tissue IHC) | |
| Regulation | Cellular stress recruits IGF2BP2 to stress granules (UniProt) | |
| Isoform / epitope | 6 isoforms; check epitope coverage across variants (UniProt) |
The catalog antibody’s IHC-P protocol (datasheet: M02010-1) is accompanied by four published IGF2BP2 chromogenic IHC protocols (PMC10227963; PMC12920223; PMC9923020; PMC13113562).
| Sample | Paraffin-embedded human lung cancer tissue; fixative not specified (datasheet M02010-1) |
| Fixation | Image fixative and duration unreported (datasheet M02010-1); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: EDTA pH 8.0 (datasheet M02010-1); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet M02010-1) |
| Primary antibody | Rabbit monoclonal (clone 24I46) anti-IGF2BP2, 1:50 (datasheet M02010-1) |
| Primary incubation | Overnight at 4 °C (datasheet M02010-1) |
| Detection | HRP-conjugated secondary, DAB chromogen (datasheet M02010-1) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | IGF2BP2-positive staining in glandular cells of adrenal gland (HPA tissue IHC: High). HPA tissue profile: Mainly cytoplasmic expression in most tissues. No signal in the no-primary control. |
IGF2BP2 should appear mainly in the cytoplasm of stained cells on paraffin sections (HPA: mainly cytoplasmic expression in most tissues). High staining is reported in selected glandular cells, hematopoietic cells, cardiomyocytes and myocytes (HPA: tissue IHC). Nuclear localisation is also possible (UniProt Q9Y6M1: subcellular location), while membrane staining lacks support from its topology (UniProt Q9Y6M1: no transmembrane segment). HPA rates tissue IHC reliability Enhanced, with medium consistency between staining and RNA data (HPA: tissue IHC).
| Cytoplasmic staining in adrenal, duodenal, gallbladder, parathyroid or stomach glandular cells. | This matches the reported compartment and high-staining cell types (HPA: mainly cytoplasmic; High in those glandular cells). Judge the named cells against adjacent tissue rather than treating all cells in the section as equally positive (general IHC interpretation). |
| Discrete cytoplasmic puncta, or some nuclear signal alongside cytoplasmic staining. | Puncta can fit localisation to cytoplasmic mRNP granules, P-bodies or stress granules; nuclear localisation is also annotated (UniProt Q9Y6M1: subcellular location). A punctate pattern alone does not identify a granule type (general IF/IHC interpretation). |
| Predominantly cell-surface or extracellular staining with little cytoplasmic signal. | That pattern conflicts with the reported mainly cytoplasmic tissue pattern and absence of a transmembrane segment (HPA: tissue IHC; UniProt Q9Y6M1: topology). Treat it as suspect and compare it with a validated positive section and controls (general IHC practice). |
| Strong colour in unexpected cells, especially where staining follows tissue edges or pigment. | The distribution may reflect cross-reactivity or endogenous detection activity (general chromogenic IHC practice). HPA lists high staining for particular cell types, not every cell in those tissues (HPA: tissue IHC); confirm cell identity and inspect a primary-omission control. |
| Haze across cells and empty tissue spaces, or no signal in a reported high-staining section. | Widespread haze limits localisation and may reflect nonspecific detection; absent signal may reflect a workflow failure (general IHC practice). Neither finding alone establishes IGF2BP2 absence, since HPA reports high staining in selected cells of those tissues (HPA: tissue IHC). |
| Choice of positive section | Use a section containing one of the reported High populations, such as adrenal glandular cells or heart cardiomyocytes (HPA: tissue IHC). High describes staining in the specified cells, so inspect those cells when assessing a run (HPA: tissue IHC; general IHC interpretation). |
| Low-staining comparison | HPA reports Low staining in cerebellar granular-layer cells, hippocampal and caudate neurons, bladder urothelium, prostate glandular cells and ovarian stroma (HPA: tissue IHC). Low is not a documented negative control; weak staining there does not by itself invalidate the assay. |
| Compartment and molecular form | IGF2BP2 is a 599-residue chain with six annotated isoforms and no signal peptide, propeptide or transmembrane segment (UniProt Q9Y6M1: processing, isoforms, topology). These annotations support an intracellular readout; they do not identify which isoform an antibody detects. |
| Evidence strength | HPA labels tissue IHC Enhanced but describes only medium consistency with RNA expression (HPA: tissue IHC). HPA035145 and CAB017126 each have Enhanced IHC and Supported ICC status (HPA: antibody validation); these ratings do not validate an unspecified catalog antibody. |
| Q: What should IF/ICC show? | A: Cytosolic staining is the HPA ICC-IF result (HPA: subcellular, cytosol enhanced). UniProt also annotates nucleus and cytoplasmic granules (UniProt Q9Y6M1: subcellular location). Interpret any additional compartment with controls; IF/ICC conditions belong in its own guide. |
| Situation | Likely cause | Next action |
|---|---|---|
| Reported high-staining cells are blank. | A failed detection step, unsuitable antibody conditions or absent target in the sampled cells are possibilities (general IHC practice); HPA's High designation does not guarantee every section is positive (HPA: tissue IHC). | Confirm the expected cell population is present, check a concurrently stained positive section, then review antibody dilution, retrieval and detection against the chosen assay instructions (general IHC practice). |
| Colour covers tissue spaces and many unrelated structures. | Nonspecific binding or incomplete blocking or washing may produce diffuse background (general chromogenic IHC practice); this obscures the mainly cytoplasmic pattern expected from HPA (HPA: tissue IHC). | Compare a primary-omission control; review blocking, wash stringency, antibody dilution and detection development time (general IHC practice). Score only cell-associated staining that remains interpretable. |
| Staining is concentrated at the surface of cells. | A membrane-dominant result is discordant with the reported cytoplasmic pattern and lack of a transmembrane segment (HPA: tissue IHC; UniProt Q9Y6M1: topology). Nonspecific staining is one possibility (general IHC interpretation). | Inspect a reported high-staining cell population and the primary-omission control; review antibody specificity and detection background before assigning a compartment (general IHC practice). |
| Nuclear staining dominates with little cytoplasmic staining. | Nuclear localisation is annotated, but HPA describes mainly cytoplasmic tissue staining (UniProt Q9Y6M1: subcellular location; HPA: tissue IHC). Nuclear dominance alone cannot establish either specificity or artefact. | Compare matched positive tissue and omission controls; record nuclear and cytoplasmic staining separately before interpreting the deviation (general IHC interpretation). |
| An apparently low-staining comparison shows weak positive cells. | HPA's Low category denotes observed staining, not verified absence (HPA: tissue IHC). Weak signal may therefore be compatible with the reference pattern rather than a failed negative control. | Do not score the tissue as a zero-expression control; compare the named cell population and intensity with a reported High population in the same run (HPA: tissue IHC; general IHC interpretation). |
| Unexpected cells stain strongly while expected cells do not. | Cell misidentification, cross-reactivity or endogenous detection activity can distort the apparent distribution (general chromogenic IHC practice). HPA's High calls apply to specified cell types (HPA: tissue IHC). | Recheck morphology and the counterstain, inspect omission and detection controls, and repeat with an appropriately validated antibody if the discordance persists (general IHC practice; HPA: antibody validation). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Enhanced — Medium consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adrenal gland | Glandular cells | High | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | High | Protein (IHC) | HPA → |
| Duodenum | Glandular cells | High | Protein (IHC) | HPA → |
| Gallbladder | Glandular cells | High | Protein (IHC) | HPA → |
| Heart muscle | Cardiomyocytes | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| None in HPA: IGF2BP2 is detected in all 45 scored tissues. Use a no-primary (secondary-only) and an isotype control instead. | ||||
Troubleshoot IGF2BP2 staining in paraffin sections by checking retrieval, controls, cellular localisation and scoring before interpreting chromogenic signal.
Catalog antibodies list IHC reactivity in human, mouse, and rat (catalog applications and reactivity). IHC images show human paraffin sections; an IF image shows U2OS cells (catalog image captions).
The rendered M02010-1 card shows IHC in a paraffin-embedded human lung cancer section (M02010-1 IHC caption). A second caption documents a paraffin-embedded human testicular germ cell tumor section; the catalog lists IHC and IF/ICC applications with human, mouse, and rat reactivity (M02010-1 IHC caption; catalog applications and reactivity).
Which to pick: For tissue IHC, choose monoclonal M02010-1: its own caption documents EDTA pH 8.0 retrieval and 1:50 primary antibody on a human paraffin section; the fixative is unreported (M02010-1 IHC caption; catalog clone 24I46). For IF/ICC, choose A02010-4 because its IF caption documents U2OS cells stained with 1:100 primary antibody, fluorescent secondary antibody, and DAPI (A02010-4 IF caption). For mouse or rat samples, A02010-4, M02010-1, and M02010-2 all list reactivity, but the supplied IHC images document human tissue only; M02010-2 has no supplied IHC image (catalog reactivity and IHC image captions).