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- Table of Contents
Plan chromogenic INPPL1 IHC-P using cytoplasmic tissue staining as the expected pattern (HPA tissue IHC). Start with the catalog antibody at 0.5–1 μg/mL (datasheet A01790), and use placenta trophoblasts as a high-staining reference (HPA tissue IHC).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Cytoplasmic staining across tissues (HPA tissue IHC) | |
| Staining pattern | Cytoplasmic staining across many tissue cell types (HPA tissue IHC) | |
| Antigen retrieval | Citrate pH 6 HIER, heat-mediated (datasheet A01790) | |
| Positive control | Bronchus+4 more · see all | |
| Negative control | Adipose tissue |
| Fixation | Keep fixation consistent across sections (standard IHC practice; not target-specific); Matched tissue-IHC evidence does not establish the fixation claim. Validate the specimen-specific method before use. (selected-SKU IHC image A01790) | |
| Caveat | Activation can shift SHIP2 toward the membrane (UniProt) | |
| Regulation | Macrophages express it; blood monocytes do not (UniProt) | |
| Isoform / epitope | 2 isoforms; epitope coverage is unspecified (UniProt) |
The catalog antibody protocol uses citrate pH 6 retrieval (datasheet A01790). Two published IHC protocols add brain and colorectal tissue examples (PMC11150309; PMC5341996).
| Sample | Paraffin-embedded human gastric cancer tissue; fixative not specified (datasheet A01790) |
| Fixation | Image fixative and duration unreported (datasheet A01790); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: Citrate pH 6, 20 min (datasheet A01790) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A01790) |
| Primary antibody | Rabbit anti-INPPL1, 0.5-1μg/ml (datasheet A01790) |
| Primary incubation | Overnight at 4 °C (datasheet A01790) |
| Detection | Streptavidin-biotin complex (SABC), DAB chromogen (datasheet A01790) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | INPPL1-positive staining in respiratory epithelial cells of bronchus (HPA tissue IHC: High). HPA tissue profile: Ubiquitous cytoplasmic expression. No signal in the no-primary control. |
INPPL1 (SHIP2) is mainly cytosolic, with reported cytoskeletal, membrane and nuclear locations; it has no transmembrane segment (UniProt O15357). In tissue IHC, expect predominantly cytoplasmic staining, including strong staining in selected epithelial and glandular cells and Purkinje cells (HPA tissue IHC). HPA describes the tissue pattern as ubiquitous cytoplasmic expression, but rates its IHC evidence Approved, with medium consistency between staining and RNA data (HPA tissue IHC).
| Clear cytoplasmic staining in bronchial respiratory epithelium, colonic or duodenal glands, or cerebellar Purkinje cells. | These are reported High cell-level examples (HPA tissue IHC). Judge the named cells, rather than the whole section, as the positive reference. A cytoplasmic pattern agrees with HPA tissue IHC and the principal cytosolic location (UniProt O15357). |
| A sharp nuclear-only, uniformly surface-only, or extracellular deposit replaces cytoplasmic staining. | Treat a dominant pattern in an unexpected compartment as suspect, especially if the expected cytoplasmic signal is absent (HPA tissue IHC). UniProt also lists nuclear and membrane-associated locations, so a minor signal there is not automatically artefactual (UniProt O15357). Check the control and morphology before assigning localisation. |
| Adipocytes stain as strongly as adjacent expected-positive cells. | HPA reports adipocytes as Not detected (HPA tissue IHC). Strong adipocyte staining warrants a cross-reactivity or detection-artifact check; the HPA rating is Approved with medium staining–RNA consistency, so this comparison is a warning flag rather than an absolute specificity test (HPA tissue IHC). |
| Color coats stroma, lumina or most cells without clear cellular boundaries. | Diffuse deposit obscures whether signal occupies the reported cytoplasmic compartment (HPA tissue IHC). Uneven reagent coverage, nonspecific detection or endogenous enzyme activity are general chromogenic IHC possibilities; compare a no-primary control and inspect tissue morphology (general IHC practice). |
| A reported high-staining cell population shows no signal. | First verify that the expected cells are present and preserved: HPA's High calls are cell-specific, including respiratory epithelial, glandular and Purkinje cells (HPA tissue IHC). A blank positive reference calls for a run-level check before concluding that the test sample lacks INPPL1 (general IHC practice). |
| Cell choice for interpretation | HPA reports High staining in specified cell populations across bronchus, cerebellum, colon, duodenum, esophagus, fallopian tube, oral mucosa and placenta, while adipocytes are Not detected (HPA tissue IHC). Score the listed cells within their tissue context; low staining is also reported in parathyroid glandular cells, ovarian follicle cells and splenic red-pulp cells (HPA tissue IHC). |
| Compartment and cell state | The cytosol is a principal location, while UniProt also reports cytoskeleton, membrane, projections, nucleus and spindle pole (UniProt O15357). Redistribution to membrane ruffles can follow activation and depends on stimulus and cell type (UniProt O15357). These locations support cautious interpretation of focal peripheral signal, not an expectation that every paraffin section shows it. |
| Antibody evidence | The listed antibody, HPA037601, is IHC Approved; HPA describes medium consistency between antibody staining and RNA expression (HPA antibodies; HPA tissue IHC). Use the reported pattern as a practical comparator, while treating an unexpected compartment or cell type as a reason to review controls rather than proof of INPPL1. |
| Isoforms and topology | UniProt lists 2 isoforms and no transmembrane segment or signal peptide (UniProt O15357). The supplied evidence gives no epitope mapping, so it cannot establish isoform-selective staining. A surface-only interpretation also needs scrutiny against the reported cytoplasmic tissue pattern (HPA tissue IHC). |
| Situation | Likely cause | Next action |
|---|---|---|
| The positive reference section is blank. | The expected cell population may be absent from the examined area, or the staining run may have failed (HPA tissue IHC; general IHC practice). | Locate an HPA-listed High cell population on the section, then check reagent coverage, retrieval, primary-antibody step and detection controls (HPA tissue IHC; general IHC practice). No INPPL1-specific retrieval condition is established by these sources. |
| All cells stain, including adipocytes. | A broad deposit may reflect nonspecific detection or endogenous activity; adipocytes are reported Not detected (general IHC practice; HPA tissue IHC). | Compare a no-primary control and review blocking and detection steps; for enzyme-based detection, check the relevant endogenous-activity control (general IHC practice). Reassess against identifiable HPA-positive cells (HPA tissue IHC). |
| Only nuclei or extracellular spaces carry strong color. | The dominant pattern conflicts with HPA's ubiquitous cytoplasmic IHC description, although UniProt includes the nucleus among reported locations (HPA tissue IHC; UniProt O15357). | Inspect morphology and background controls, then repeat interpretation in an HPA-listed positive cell population before calling the compartment specific (HPA tissue IHC; general IHC practice). |
| Peripheral staining appears in a subset of otherwise cytoplasmic cells. | Stimulus- and cell-dependent membrane redistribution is reported, but its occurrence in this section is unknown (UniProt O15357). | Record peripheral and cytoplasmic signal separately; require convincing cell boundaries and a clean control before assigning membrane-associated staining (UniProt O15357; general IHC practice). |
| Weakly stained cells are mistaken for a failed section. | HPA reports Low staining in parathyroid glandular cells, ovarian follicle cells and splenic red-pulp cells (HPA tissue IHC). | Interpret intensity by the named cell type and compare an HPA-listed High population processed in the same run (HPA tissue IHC; general IHC practice). |
| Can ICC/IF images define the expected paraffin IHC pattern? | HPA ICC/IF supports a mainly cytosolic location and approves an additional Golgi location; its antibody status is ICC Supported (HPA subcellular; HPA antibodies). | Use ICC/IF as a localisation cross-check only; use HPA tissue IHC for the paraffin-section cell pattern, without requiring visible Golgi staining in IHC (HPA subcellular; HPA tissue IHC). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Approved — Medium consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Bronchus | Respiratory epithelial cells | High | Protein (IHC) | HPA → |
| Cerebellum | Purkinje cells | High | Protein (IHC) | HPA → |
| Colon | Glandular cells | High | Protein (IHC) | HPA → |
| Duodenum | Glandular cells | High | Protein (IHC) | HPA → |
| Esophagus | Squamous epithelial cells | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Not detected | Protein (IHC) | HPA → |
Troubleshoot INPPL1 staining in paraffin sections by checking retrieval, cellular distribution, controls and cell type before interpreting signal intensity.
Two anti-INPPL1 antibodies have IHC images from human tissues and mouse and rat brain, plus IF/ICC cell images (catalog image captions).
A01790 has IHC images from paraffin-embedded human gastric, lung, ovarian, and placental tissue, and an IF/ICC image from U20S cells (A01790 image captions). M01790 has IHC images from paraffin-embedded mouse and rat brain and human ovarian and renal tumors, and an IF/ICC image from HELA cells (M01790 image captions).
Which to pick: For human tissue IHC, choose A01790 when its citrate pH 6 retrieval matches your plan (A01790 IHC captions); choose M01790 for mouse or rat brain examples using EDTA pH 8 retrieval (M01790 IHC captions). For IF/ICC, both have cell images; A01790 is rabbit-hosted, while M01790 is monoclonal clone 8C13 and mouse-hosted (catalog entries; IF image captions). For cross-species tissue IHC, M01790 has human, mouse, and rat paraffin-section examples (M01790 IHC captions). The fixative is unreported for both antibodies' IHC examples (A01790 and M01790 IHC captions).