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- Table of Contents
This guide pairs KIF15 tissue staining patterns with a paraffin-section IHC workflow (HPA tissue IHC; datasheet A05983-1). Use colon glandular or testis Leydig cells as positive references (HPA tissue IHC), and start the catalog antibody at 0.5–1 µg/mL (datasheet A05983-1).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Cytoplasmic and nuclear tissue staining (HPA tissue IHC) | |
| Staining pattern | Cytoplasmic and nuclear staining across several tissues (HPA tissue IHC) | |
| Antigen retrieval | EDTA pH 8.0 HIER, heat-mediated (datasheet A05983-1) | |
| Positive control | Appendix+4 more · see all | |
| Negative control | Adipose tissue+4 more · see all |
| Fixation | Keep paraffin-section fixation consistent (standard IHC practice; not target-specific) | |
| Caveat | Presumed off-target binding was observed and disregarded (HPA tissue IHC) | |
| Regulation | RNA group-enriched in lymphoid tissue (HPA tissue IHC: RNA) | |
| Isoform / epitope | 4 isoforms; map the epitope; no extracellular domain (UniProt) |
The catalog antibody’s IHC-P protocol is supplemented by published KIF15 IHC conditions for human hepatocellular carcinoma biopsies (PMC7157793) and tissue sections (PMC11909966).
| Sample | Paraffin-embedded human colon cancer tissue; fixative not specified (datasheet A05983-1) |
| Fixation | Image fixative and duration unreported (datasheet A05983-1); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: EDTA pH 8.0 (datasheet A05983-1); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A05983-1) |
| Primary antibody | Rabbit anti-KIF15, 0.5-1μg/ml (datasheet A05983-1) |
| Primary incubation | Overnight at 4 °C (datasheet A05983-1) |
| Detection | Streptavidin-biotin complex (SABC), DAB chromogen (datasheet A05983-1) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | KIF15-positive staining in glandular cells of appendix (HPA tissue IHC: High). HPA tissue profile: Cytoplasmic and nuclear expression in several different tissue types. No signal in the no-primary control. |
KIF15 is a cytoplasmic motor that appears as fine puncta in interphase and on the mitotic spindle during division (UniProt Q9NS87). In tissue IHC, expect staining in selected glandular, germinal center, Leydig, cortical thymic, and hematopoietic cells (HPA tissue IHC). HPA also reports nuclear staining in several tissues; its tissue IHC assessment is Approved, with presumed off-target binding disregarded and external verification pending (HPA tissue IHC). KIF15 has no transmembrane segment (UniProt Q9NS87 topology).
| Cytoplasmic staining in colon glandular cells or lymph-node germinal center cells, with some nuclear staining. | This fits two HPA high-staining cell populations and its broader cytoplasmic and nuclear tissue profile (HPA tissue IHC). Cytoplasmic signal is consistent with interphase KIF15 (UniProt Q9NS87). Score the named cell population and compartment separately; nuclear staining alone cannot establish specificity because HPA reports possible off-target binding (HPA tissue IHC). |
| A spindle-shaped signal in an identifiable mitotic cell. | Spindle localization agrees with KIF15's role in mitotic spindle assembly (UniProt Q9NS87). Interpret the signal alongside cell morphology and surrounding tissue staining; a chromogenic section may not resolve the fine spindle pattern clearly (general IHC practice). A single spindle-like profile is insufficient to validate the whole stain (general IHC practice). |
| Predominantly continuous cell-surface or extracellular staining, without the expected cellular pattern. | This is atypical for KIF15's reported cytoplasmic and spindle localization and lack of a transmembrane segment (UniProt Q9NS87). Review tissue morphology, detection controls, and antibody specificity before calling it KIF15; division-site membrane association is reported only by similarity and does not establish a general surface pattern (UniProt Q9NS87). |
| Strong signal in adipocytes or esophageal squamous epithelial cells. | Both are listed as not detected in HPA tissue IHC, so widespread staining there warrants scrutiny (HPA tissue IHC). Compare a no-primary control for endogenous detection activity and examine whether signal follows cell boundaries or deposits nonspecifically (general IHC practice). HPA's Approved assessment also notes presumed off-target binding (HPA tissue IHC). |
| No staining in colon glandular cells or testis Leydig cells. | Both are high-staining reference populations in HPA tissue IHC, making an entirely blank positive-control section a reason to check the run (HPA tissue IHC). Verify tissue identity, antibody and detection steps, and the control slide before interpreting a study specimen as negative (general IHC practice). HPA levels describe observed patterns, not guaranteed results under every assay condition (HPA tissue IHC). |
| Tissue and cell selection | Use the named cell population, not the whole organ, to judge a control: colon glandular, lymph-node germinal center, and testis Leydig cells are High; bone-marrow hematopoietic cells are Medium (HPA tissue IHC). Adipocytes and esophageal squamous epithelial cells are listed as not detected (HPA tissue IHC). |
| Cell state and compartment | Interphase KIF15 is reported as fine cytoplasmic puncta and irregular dots; mitotic KIF15 is reported on the spindle (UniProt Q9NS87). HPA's tissue IHC profile also includes nuclear staining, so nuclear signal requires context rather than automatic rejection (HPA tissue IHC). |
| Antibody evidence | Three listed HPA rabbit polyclonal antibodies have Approved IHC status, with no Enhanced designation supplied (HPA antibodies). The HPA tissue assessment notes presumed off-target binding, supporting data, and pending external verification; retain appropriate tissue and detection controls when judging an unfamiliar pattern (HPA tissue IHC; general IHC practice). |
| Isoforms and epitope scope | UniProt lists four KIF15 isoforms and a kinesin motor domain at residues 26–363 (UniProt Q9NS87). No antibody epitope is supplied, so the record cannot establish which isoforms a given IHC stain detects or whether a particular retrieval condition exposes its epitope (UniProt Q9NS87; HPA antibodies). |
| IF/ICC Q: What pattern is supported here? | A: UniProt reports interphase cytoplasmic puncta and mitotic spindle localization (UniProt Q9NS87). HPA supplies no main ICC-IF location or cell-line images, and the listed antibodies have no ICC status supplied; use those statements as a localization expectation, not as ICC validation (HPA subcellular; HPA antibodies). |
| Situation | Likely cause | Next action |
|---|---|---|
| The known-positive control is blank. | A failed antibody or detection step is possible; colon glandular and testis Leydig cells are reported High (HPA tissue IHC; general IHC practice). | Check that the control contains the specified cells, then review antibody application, chromogen, and counterstain against the run record (general IHC practice). Avoid calling study sections negative until the positive control works (general IHC practice). |
| The slide shows diffuse haze across cells and extracellular space. | Background from detection chemistry or inadequate blocking can obscure cellular localization (general IHC practice). Diffuse extracellular staining does not match the reported cytoplasmic and spindle pattern (UniProt Q9NS87). | Inspect a no-primary control, review blocking and wash steps, and compare cell-resolved staining with the HPA tissue pattern (general IHC practice; HPA tissue IHC). |
| Nuclear staining dominates without clear cytoplasmic signal. | HPA reports nuclear as well as cytoplasmic tissue staining, while UniProt emphasizes cytoplasmic and spindle localization; nuclear signal alone is therefore inconclusive (HPA tissue IHC; UniProt Q9NS87). | Check whether the named high-staining cells also show a coherent cellular pattern, then compare controls and another listed IHC-Approved antibody if available (HPA tissue IHC; HPA antibodies; general IHC practice). |
| A not-detected reference cell population stains strongly. | HPA lists adipocytes and esophageal squamous epithelial cells as not detected and acknowledges presumed off-target binding in its tissue assessment (HPA tissue IHC). Endogenous detection activity is another general IHC possibility (general IHC practice). | Confirm the cell identity and run a no-primary detection control; interpret persistent signal cautiously alongside an HPA high-staining population (general IHC practice; HPA tissue IHC). |
| Only a few mitotic cells show spindle-associated staining. | Spindle localization is tied to mitosis, whereas interphase localization is cytoplasmic and punctate (UniProt Q9NS87). The number of mitotic cells visible depends on the section sampled (general IHC practice). | Examine identifiable interphase cells in an HPA high-staining population and score their cellular staining separately from spindle profiles (HPA tissue IHC; UniProt Q9NS87; general IHC practice). |
| Results differ between two tissue sections. | HPA reports High, Medium, Low, and not-detected staining across specific cell populations, so different tissue composition can change the apparent result (HPA tissue IHC). | Compare the same named cell type and compartment across sections, record the control outcome, and avoid treating whole-section intensity as a cell-specific score (HPA tissue IHC; general IHC practice). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Approved — Presumed off target binding observed and disregarded. External characterization data supports antibody staining. Pending external verification.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Appendix | Glandular cells | High | Protein (IHC) | HPA → |
| Colon | Glandular cells | High | Protein (IHC) | HPA → |
| Duodenum | Glandular cells | High | Protein (IHC) | HPA → |
| Lymph node | Germinal center cells | High | Protein (IHC) | HPA → |
| Small intestine | Glandular cells | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Caudate | Glial cells | Not detected | Protein (IHC) | HPA → |
| Cerebellum | Cells in granular layer | Not detected | Protein (IHC) | HPA → |
| Cervix | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Epididymis | Glandular cells | Not detected | Protein (IHC) | HPA → |
Troubleshoot KIF15 staining in paraffin sections by checking retrieval, cellular pattern, controls and scoring before interpreting chromogenic signal.
A05983-1 has IHC images from human colon cancer and rat testis paraffin sections, plus an IF image from A431 cells (catalog image captions).
A05983-1 was used for IHC on human colon cancer and rat testis paraffin sections (catalog IHC image captions). The same SKU was used for IF in A431 cells (catalog IF image caption).
Which to pick: For tissue IHC, choose A05983-1: its images show paraffin sections with EDTA retrieval at pH 8.0, and the fixative is unreported (catalog IHC image captions). For IF/ICC, choose A05983-1; IF and ICC are listed applications, and its A431 IF image used 5 μg/mL (catalog applications; catalog IF image caption). For human and rat work, A05983-1 lists both species as reactive, with IHC images for each; it is rabbit hosted, while clonality is unreported (catalog reactivity and host; catalog IHC image captions; catalog clone field).