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- Table of Contents
Plan KLK1 chromogenic IHC on paraffin sections using salivary glandular and pancreatic exocrine cells as reference sites (HPA tissue IHC). This guide covers fixation consistency, controls and scoring in light of KLK1 secretion and low staining–RNA consistency (HPA tissue IHC).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Tissue-IHC subcellular compartment unestablished (HPA tissue IHC) | |
| Staining pattern | Salivary glandular and pancreatic exocrine cells; subcellular pattern unreported (HPA tissue IHC) | |
| Antigen retrieval | Citrate pH 6.0 HIER, 95–98 °C, 20 min (rule: cytoplasmic / membrane antigen) | |
| Positive control | Adrenal gland+4 more · see all | |
| Negative control | Adipose tissue+4 more · see all |
| Fixation | Keep fixation consistent across paraffin sections (standard IHC practice; not target-specific); KLK1-specific effects are unknown. | |
| Caveat | Secreted KLK1 may stain away from RNA-positive cells (HPA tissue IHC) | |
| Regulation | Staining regulation unreported (HPA tissue IHC) | |
| Isoform / epitope | 2 isoforms; mature chain starts at aa 25; epitope site unknown (UniProt) |
The catalog antibody protocol is followed by three published KLK1 IHC protocols covering astrocytoma, mouse kidney, and prostate tissue (PMC4521496; PMC11432477; PMC8110393).
| Sample | Tissue sections; selected-image fixative not specified (standard IHC workflow) |
| Fixation | Image fixative and duration unreported (datasheet PA1625); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat-induced epitope retrieval in citrate buffer, pH 6.0, 20 min at 95–98 °C (standard rule: cytoplasmic / membrane antigen) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% normal serum of the secondary host, 30 min, room temperature (standard) |
| Primary antibody | Rabbit anti-KLK1, 0.5-1μg/ml (datasheet PA1625) |
| Primary incubation | Overnight at 4 °C (standard) |
| Detection | HRP-polymer secondary, DAB chromogen 5–10 min (standard) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | KLK1-positive staining in glandular cells of adrenal gland (HPA tissue IHC: Medium). HPA tissue profile: Expressed mainly in salivary gland but also pancreas. No signal in the no-primary control. |
KLK1 is a secreted protein with no transmembrane segment; UniProt gives no precise subcellular location (HPA: secreted; UniProt P06870 topology). In paraffin-section IHC, expect staining mainly in salivary glandular cells and also pancreatic exocrine glandular cells, both reported at Medium intensity (HPA tissue IHC). HPA rates its tissue IHC Approved, while noting low agreement with RNA and presumed off-target staining (HPA tissue IHC reliability).
| Salivary glandular cells stain at a moderate level, with similar staining in pancreatic exocrine glandular cells. | This matches the reported positive cell types and Medium staining level (HPA tissue IHC). Compare identifiable cells within each section; secreted KLK1 may extend beyond its cell of origin, so extracellular signal alone does not identify the producing cell (HPA: secreted). |
| A sharply nuclear or membrane-rim pattern dominates the glandular cells. | Treat the compartment assignment as suspect: HPA describes KLK1 as secreted, and UniProt reports no transmembrane segment or annotated subcellular location (HPA subcellular; UniProt P06870 topology). Recheck morphology and detection controls before calling a specific KLK1 pattern (standard IHC practice). |
| Adipocytes or bone-marrow hematopoietic cells stain as strongly as the expected glandular cells. | Those cell types were Not detected in HPA tissue IHC (HPA tissue IHC). Investigate cross-reactivity or endogenous detection activity before interpreting the stain; HPA explicitly notes presumed off-target binding in its reliability assessment (HPA tissue IHC reliability). |
| Colour spreads across glandular and nonglandular structures without clear cell boundaries. | A broad wash of signal cannot establish which cells contain KLK1, particularly for a secreted protein (HPA: secreted). Review the no-primary control and detection background, then score only anatomically identifiable staining (standard IHC practice). |
| Salivary gland and pancreatic exocrine cells show no discernible staining. | Both are reported at Medium staining in HPA tissue IHC, making them useful positive comparisons (HPA tissue IHC). A blank slide warrants checking section integrity, retrieval, antibody application and detection with controls; it does not by itself prove KLK1 absence (standard IHC practice). |
| Secretion and precursor processing (HPA: secreted; UniProt P06870 processing). | UniProt annotates a signal peptide at 1–18, propeptide at 19–24 and mature chain at 25–262 (UniProt P06870 processing). Interpret cell-associated and possible extracellular staining in that context; the supplied sources do not establish an exact IHC compartment (HPA subcellular; UniProt P06870). |
| Isoform expression (UniProt P06870 tissue specificity). | UniProt lists 2 isoforms and reports isoform 2 expression in several tissues, including pancreas and salivary glands (UniProt P06870). The supplied evidence gives no antibody epitope or isoform-specific IHC pattern, so a stained section cannot identify which isoform contributed (UniProt P06870; HPA tissue IHC). |
| Strength of tissue-pattern evidence (HPA tissue IHC reliability). | HPA calls the IHC result Approved but reports low antibody–RNA consistency and presumed off-target staining (HPA tissue IHC reliability). Its observed cell patterns guide control selection; they do not make every stained structure KLK1-specific (HPA tissue IHC reliability). |
| Glycosylation annotations (UniProt P06870 glycosylation). | UniProt lists 6 glycosylation sites (UniProt P06870). Neither supplied source links those sites to an IHC staining change or a fixation effect, so do not use them to explain a weak or absent section signal (UniProt P06870; HPA tissue IHC). |
| Situation | Likely cause | Next action |
|---|---|---|
| Expected glandular cells are blank in both positive tissues. | A failed staining run is possible; HPA reports Medium signal in both salivary and pancreatic glandular cells (HPA tissue IHC). | Check section morphology, antibody application, retrieval and detection against a concurrently processed positive control (standard IHC practice). |
| The no-primary control develops colour. | The signal may arise from the detection system or endogenous activity rather than primary-antibody binding (standard IHC practice). | Verify blocking and detection reagents, then repeat with a clean no-primary control before scoring KLK1 (standard IHC practice). |
| Staining is strongest in adipocytes or marrow hematopoietic cells. | HPA reports these cells as Not detected and flags presumed off-target binding (HPA tissue IHC). | Compare matched sections with the expected glandular positives and detection controls; withhold a KLK1 call for unsupported cell staining (HPA tissue IHC; standard IHC practice). |
| Diffuse extracellular colour obscures glandular boundaries. | Secreted KLK1 can complicate assigning a signal to a cell of origin; the exact IHC compartment is unreported (HPA: secreted; HPA tissue IHC). | Score identifiable glandular cells separately from extracellular deposits and review background controls before assigning localisation (standard IHC practice). |
| Kidney tubules stain weakly while salivary gland stains moderately. | This difference is compatible with HPA’s Low tubular and Medium salivary glandular observations (HPA tissue IHC). | Use the salivary section to assess run performance; avoid treating weak kidney staining alone as a failed assay (HPA tissue IHC; standard IHC practice). |
| Can IF/ICC confirm a specific KLK1 compartment? | HPA calls KLK1 secreted but provides no main subcellular location or ICC-IF image-bearing cell lines (HPA subcellular). | Treat IF/ICC localisation as exploratory and assess it with appropriate controls; the supplied evidence does not validate a specific IF/ICC pattern (HPA subcellular; standard IF practice). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Approved — Low consistency between antibody staining and RNA expression data. Secreted protein, tissue location of RNA and protein is expected to differ. Presumed off target binding observed and disregarded.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adrenal gland | Glandular cells | Medium | Protein (IHC) | HPA → |
| Appendix | Glandular cells | Medium | Protein (IHC) | HPA → |
| Colon | Glandular cells | Medium | Protein (IHC) | HPA → |
| Pancreas | Exocrine glandular cells | Medium | Protein (IHC) | HPA → |
| Rectum | Glandular cells | Medium | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | Not detected | Protein (IHC) | HPA → |
| Breast | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Caudate | Glial cells | Not detected | Protein (IHC) | HPA → |
| Cerebral cortex | Endothelial cells | Not detected | Protein (IHC) | HPA → |
Troubleshoot KLK1 staining in paraffin sections by checking retrieval, cell type, staining pattern and controls before comparing chromogenic signal across samples.
PA1625 has a real IHC(P) image from human pancreatic cancer tissue (catalog image caption); Human, Mouse, and Rat reactivity is listed (catalog: reactivity).
PA1625 is the only SKU shown, with an IHC(P) image of human pancreatic cancer tissue (catalog image caption). Its application list includes IHC, but no IF/ICC application or image is listed (catalog: applications; IF image alts).
Which to pick: For paraffin-section IHC, choose PA1625 at 0.5–1 μg/ml (catalog: IHC-P dilution); its image shows human pancreatic cancer tissue, and the fixative is unreported (catalog image caption). No IF/ICC pick is supported by the listed applications or images (catalog: applications; IF image alts). For cross-species planning, PA1625 lists Human, Mouse, and Rat reactivity, but its IHC(P) image documents human tissue only; clonality is unreported (catalog: reactivity; image caption; clone).