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- Table of Contents
Plan chromogenic LATS1 IHC in paraffin sections, using cytoplasmic staining and high trophoblast staining in placenta as references (HPA tissue IHC). This guide covers fixation, antigen retrieval, antibody titration, controls, and interpretation with the IHC-validated antibody A01051-2 (datasheet A01051-2).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Mainly cytoplasmic in tissue sections (HPA tissue IHC) | |
| Staining pattern | Cytoplasmic staining in glandular cells (HPA tissue IHC) | |
| Antigen retrieval | Citrate pH 6 HIER, heat-mediated (datasheet A01051-2) | |
| Positive control | Adrenal gland+4 more · see all | |
| Negative control | Spleen |
| Fixation | Keep fixation consistent across sections (standard IHC practice; not target-specific) | |
| Caveat | Antibody staining and RNA levels show low consistency (HPA tissue IHC) | |
| Regulation | Low tissue specificity at RNA level (HPA tissue RNA) | |
| Isoform / epitope | 2 isoforms; check epitope coverage for each (UniProt) |
The catalog antibody’s IHC-P protocol is paired with a published LATS1 protocol using gastric cancer tissue microarrays (PMC5746657).
| Sample | Paraffin-embedded human placenta tissue; fixative not specified (datasheet A01051-2) |
| Fixation | Image fixative and duration unreported (datasheet A01051-2); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: Citrate pH 6, 20 min (datasheet A01051-2) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A01051-2) |
| Primary antibody | Rabbit anti-LATS1, 0.5-1μg/ml (datasheet A01051-2) |
| Primary incubation | Overnight at 4 °C (datasheet A01051-2) |
| Detection | Streptavidin-biotin complex (SABC), DAB chromogen (datasheet A01051-2) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | LATS1-positive staining in glandular cells of adrenal gland (HPA tissue IHC: High). HPA tissue profile: Mainly cytoplasmic expression in most tissues. No signal in the no-primary control. |
LATS1 is a nonmembrane kinase associated with the cytoplasm, centrosomes and, during mitosis, the spindle and midbody (UniProt O95835: topology and subcellular location). In tissue IHC, expect mainly cytoplasmic staining, with strong signal reported in selected glandular cells, hepatocytes, cardiomyocytes, kidney tubule cells, trophoblasts and smooth muscle cells (HPA: tissue IHC). HPA rates its IHC evidence Approved but notes low consistency with RNA expression (HPA: reliability).
| Cytoplasmic staining in adrenal, endometrial or gallbladder glandular cells, or in liver hepatocytes. | This matches HPA's mainly cytoplasmic tissue profile and its High staining calls for these cell types (HPA: tissue IHC). Judge the named cells within each section; a positive call for one population does not establish that every neighboring cell should stain. |
| A focused signal near the centrosome in interphase, or at the spindle or midbody in dividing cells. | These locations fit the reported movement of LATS1 from centrosomes to the mitotic apparatus (UniProt O95835: subcellular location). Such structures can be difficult to resolve in chromogenic paraffin sections (general IHC practice); absence of a visible focus does not override an otherwise appropriate cytoplasmic pattern. |
| Predominantly nuclear or membrane-rim staining with little cytoplasmic signal. | Treat this as a compartment mismatch requiring validation: UniProt describes cytoskeletal and mitotic locations and reports no transmembrane segment (UniProt O95835: subcellular location and topology). Nuclear or membrane signal alone is insufficient to identify LATS1; compare the control section and check staining conditions (general IHC practice). |
| Strong staining in an unexpected cell population, including spleen red-pulp cells. | HPA reports LATS1 as not detected in spleen red-pulp cells (HPA: tissue IHC). Unexpected signal may reflect nonspecific antibody binding or endogenous detection activity; it is a flag for controls, not proof of cross-reactivity (general IHC practice). |
| Diffuse color across tissue and background spaces, or no signal in a reported high-staining cell population. | Diffuse color without cell-associated localization is difficult to score as LATS1 (general IHC practice). Conversely, absent signal in HPA-high hepatocytes or kidney tubule cells calls for a run-level check before a biological negative is assigned (HPA: tissue IHC; general IHC practice). |
| Tissue and cell population | HPA reports High staining in several specific populations, including cardiomyocytes, trophoblasts and smooth muscle cells, but not detected in spleen red-pulp cells (HPA: tissue IHC). Compare like cells, rather than treating an entire organ as uniformly positive or negative. |
| Evidence strength | The listed antibody HPA031804 has an Approved IHC status, while HPA notes low consistency between antibody staining and RNA expression (HPA: antibody validation and reliability). Use the published tissue pattern as a reference and interpret discordant results with controls; Approved does not mean IHC Enhanced. |
| Cell-cycle location | LATS1 localizes to centrosomes in interphase and moves to spindle pole bodies, the mitotic spindle and midbody during mitosis (UniProt O95835: subcellular location). A localized mitotic focus can accompany cytoplasmic staining; its visibility depends on the cells present and section resolution (general IHC practice). |
| Topology and intact protein | UniProt reports no transmembrane segment, signal peptide or propeptide, and lists a single chain spanning residues 1–1130 (UniProt O95835: topology and processing). A membrane-rim pattern or presumed secreted product is therefore unsupported by these annotations; the record gives no antibody epitope or target-specific retrieval requirement. |
| Tissue evidence versus RNA | HPA calls kidney tubule staining High, whereas UniProt's tissue-specificity note excludes kidney from adult tissues examined (HPA: tissue IHC; UniProt O95835: tissue specificity). Keep this disagreement visible when interpreting kidney sections; neither source establishes a fixation effect or explains the discrepancy. |
| Situation | Likely cause | Next action |
|---|---|---|
| No stain in hepatocytes or another HPA-high population. | A failed run, weak detection or an unsuitable staining condition is possible; absence cannot be assigned to LATS1 biology from one slide (HPA: tissue IHC; general IHC practice). | Check a concurrently stained positive section, antibody dilution, retrieval and detection steps, and counterstain visibility before scoring the sample negative (general IHC practice). No LATS1-specific retrieval condition is supplied. |
| Only nuclei or cell borders stain. | That pattern conflicts with the reported mainly cytoplasmic tissue profile and nonmembrane topology (HPA: tissue IHC; UniProt O95835: topology). | Compare an HPA-reported positive cell population and the negative control; reassess whether the chromogen follows cell boundaries or obscures cytoplasm (general IHC practice). Do not score compartment-mismatched color alone as LATS1. |
| Diffuse color masks cellular detail. | Excess background can arise from nonspecific binding or the detection system (general IHC practice); diffuse color has no clear match to HPA's mainly cytoplasmic pattern (HPA: tissue IHC). | Review the no-primary control, blocking and wash steps, detection development and counterstain; adjust the run until cell-associated signal can be distinguished from background (general IHC practice). |
| Spleen red-pulp cells or other unexpected cells stain strongly. | HPA reports red-pulp cells as not detected; nonspecific binding or endogenous detection activity is possible, but the slide alone cannot distinguish them (HPA: tissue IHC; general IHC practice). | Compare tissue controls and a no-primary control, then inspect the detection-system control appropriate to the chromogen before attributing the signal to LATS1 (general IHC practice). |
| Kidney tubules stain although the UniProt tissue note excludes kidney. | The supplied sources disagree: HPA calls tubule-cell IHC High, while UniProt excludes kidney from adult tissues examined (HPA: tissue IHC; UniProt O95835: tissue specificity). | Report the observed cell compartment and intensity alongside both source statements. Use staining controls to assess the run; do not dismiss the HPA observation or infer a fixation explanation from the disagreement. |
| Can IF/ICC confirm a punctate LATS1 location? | UniProt describes centrosomal and mitotic locations, but HPA lists no ICC/IF images or main location and gives HPA031804 no ICC validation status (UniProt O95835: subcellular location; HPA: subcellular and antibody records). | Treat IF/ICC localization as unconfirmed by these HPA records. Consult the separate IF/ICC guide for its validation and controls; do not transfer an IHC staining condition into an IF protocol. |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Approved — Low consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adrenal gland | Glandular cells | High | Protein (IHC) | HPA → |
| Endometrium | Glandular cells | High | Protein (IHC) | HPA → |
| Gallbladder | Glandular cells | High | Protein (IHC) | HPA → |
| Heart muscle | Cardiomyocytes | High | Protein (IHC) | HPA → |
| Kidney | Cells in tubules | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Spleen | Cells in red pulp | Not detected | Protein (IHC) | HPA → |
Troubleshoot chromogenic LATS1 IHC in paraffin sections using the catalog antibody’s tissue protocol, expected localisation and appropriate controls.
Anti-LATS1 antibodies cover human, mouse, and rat samples (catalog: reactivity); A01051-2 has human paraffin-section IHC images, while M01051-1 lists IF without an IF image (catalog: applications and image captions).
A01051-2 will render with a human placenta paraffin-section IHC figure; its additional IHC captions show human cholangiocarcinoma and rectal cancer, and its listed reactivity is human, mouse, and rat (A01051-2 image captions; catalog: reactivity). M01051-1 will render with listed IF validation and human, mouse, and rat reactivity, but no IHC or IF image is supplied (catalog: applications, reactivity, image captions).
Which to pick: Choose A01051-2 for paraffin-section tissue IHC: its placenta caption documents citrate pH 6 retrieval and 1 μg/ml antibody; the fixative is unreported (A01051-2 image caption). For fluorescence, M01051-1 is a rabbit monoclonal listed for IF, while A01051-2 is listed for ICC and frozen-section IHC (catalog: clonality and applications). Both list human, mouse, and rat reactivity; the supplied paraffin-section IHC images document human samples only (catalog: reactivity; A01051-2 image captions).