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- Table of Contents
Plan MAST4 paraffin IHC around mainly cytoplasmic staining, with high signal in esophageal squamous and bladder urothelial cells (HPA tissue IHC). Start with the catalog antibody’s 1:100–1:300 IHC dilution range (datasheet) and interpret staining in light of its low consistency with RNA expression (HPA tissue IHC).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Mainly cytoplasmic staining in several tissues (HPA tissue IHC) | |
| Staining pattern | High cytoplasmic staining in esophageal and bladder epithelia (HPA tissue IHC) | |
| Antigen retrieval | Citrate pH 6.0 HIER, 95–98 °C, 20 min (rule: cytoplasmic / membrane antigen) | |
| Positive control | Esophagus+4 more · see all | |
| Negative control | Adipose tissue+4 more · see all |
| Fixation | Keep fixation consistent across sections. (standard IHC practice; not target-specific) | |
| Caveat | Antibody staining has low consistency with RNA expression (HPA tissue IHC) | |
| Regulation | Expression regulation is not established (UniProt) | |
| Isoform / epitope | 5 isoforms; epitope coverage is unspecified (UniProt; datasheet) |
The catalog antibody has an IHC-P protocol; the following published MAST4 IHC methods provide additional conditions for tissue sections (PMC11012408; PMC4636393; PMC11981763).
| Sample | Paraffin-embedded human testis tissue; fixative not specified (datasheet A11085-1) |
| Fixation | Image fixative and duration unreported (datasheet A11085-1); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat-induced epitope retrieval in citrate buffer, pH 6.0, 20 min at 95–98 °C (standard rule: cytoplasmic / membrane antigen) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% normal serum of the secondary host, 30 min, room temperature (standard) |
| Primary antibody | Rabbit anti-MAST4, 1:100 - 1:300 (datasheet A11085-1) |
| Primary incubation | Overnight at 4 °C (standard) |
| Detection | HRP-polymer secondary, DAB chromogen 5–10 min (standard) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | MAST4-positive staining in squamous epithelial cells of esophagus (HPA tissue IHC: High). HPA tissue profile: Mainly cytoplasmic expression in several tissues, high in esophagus and urinary bladder. No signal in the no-primary control. |
MAST4 is annotated as cytoplasmic and has no transmembrane segment (UniProt O15021 topology). In paraffin tissue sections, expect mainly cytoplasmic staining, with high signal reported in esophageal squamous epithelial cells and urinary bladder urothelial cells (HPA tissue IHC). HPA rates the tissue profile Approved but reports low consistency between antibody staining and RNA expression, so treat the pattern as a reference for comparison (HPA tissue IHC).
| Strong cytoplasmic staining in esophageal squamous epithelium or bladder urothelium. | This matches HPA's High staining in those cell types and its mainly cytoplasmic tissue profile (HPA tissue IHC). |
| Predominantly nuclear staining in a tissue section. | Assess cautiously: tissue IHC is mainly cytoplasmic, while ICC-IF also places MAST4 in the nucleoplasm (HPA tissue IHC; HPA subcellular ICC-IF). |
| Strong staining confined to cells outside the reported positive cell types. | Compare cell identity and controls before assigning MAST4; cross-reactivity or endogenous detection activity can mimic cell-specific signal (general IHC practice; HPA tissue IHC). |
| Diffuse staining across cells and surrounding tissue, with poor compartment definition. | This is less consistent with HPA's mainly cytoplasmic profile; assess background with an appropriate no-primary control (HPA tissue IHC; general IHC practice). |
| No staining in esophageal squamous epithelium or bladder urothelium. | HPA reports High staining in both; check assay performance, while allowing for its reported antibody–RNA inconsistency (HPA tissue IHC). |
| Tissue and cell choice | Use esophageal squamous epithelium or bladder urothelium as positive-pattern references; both are High in HPA tissue IHC. |
| Comparison cells | Adipocytes and bronchial respiratory epithelial cells are reported Not detected; compare only the named cells (HPA tissue IHC). |
| Compartment | UniProt lists cytoplasm and no transmembrane segment; HPA tissue IHC describes mainly cytoplasmic signal (UniProt O15021; HPA tissue IHC). |
| Confidence in tissue calls | HPA rates tissue IHC Approved but notes low antibody–RNA consistency; a tissue result alone needs cautious interpretation (HPA tissue IHC). |
| Testis exception | HPA reports High pachytene spermatocyte staining, although UniProt lists testis as an expression exception (HPA tissue IHC; UniProt O15021). |
| Does ICC-IF predict the IHC pattern? | Only partly: ICC-IF reports approved nucleoplasm and cytosol localization; tissue IHC reports mainly cytoplasmic staining (HPA subcellular ICC-IF; HPA tissue IHC). |
| Situation | Likely cause | Next action |
|---|---|---|
| No signal in an HPA high-staining reference tissue. | The run may lack detectable signal; HPA also reports low antibody–RNA consistency (general IHC practice; HPA tissue IHC). | Confirm the expected cells are present, then review the validated IHC-P dilution, detection reagents and positive control (general IHC practice). |
| Weak cytoplasmic signal in expected cells. | Low signal can reflect staining conditions; intensity should be judged against the reported cell-specific pattern (general IHC practice; HPA tissue IHC). | Compare with an on-run positive control and check the antibody dilution and retrieval conditions specified for the assay (general IHC practice). |
| Widespread brown staining with little cell definition. | Background or endogenous detection activity may obscure the mainly cytoplasmic pattern (general IHC practice; HPA tissue IHC). | Inspect a no-primary control; review blocking, washes and endogenous peroxidase control for chromogenic IHC (general IHC practice). |
| Predominantly membrane or extracellular staining. | That distribution conflicts with the cytoplasmic annotation and absence of a transmembrane segment (UniProt O15021 topology). | Check the section and controls, then reassess antibody specificity before scoring it as MAST4 (general IHC practice). |
| Nuclear staining is stronger than cytoplasmic staining. | ICC-IF includes nucleoplasm, but HPA describes tissue IHC as mainly cytoplasmic (HPA subcellular ICC-IF; HPA tissue IHC). | Record both compartments separately and compare the nuclear pattern with controls; avoid treating ICC-IF as an IHC intensity standard (general IHC practice). |
| Testis staining conflicts with an expression summary. | HPA reports High pachytene spermatocyte staining; UniProt names testis as an expression exception (HPA tissue IHC; UniProt O15021). | Score pachytene spermatocytes specifically and report the source discrepancy alongside the observed slide pattern (HPA tissue IHC; UniProt O15021). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Approved — Low consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Esophagus | Squamous epithelial cells | High | Protein (IHC) | HPA → |
| Testis | Pachytene spermatocytes | High | Protein (IHC) | HPA → |
| Urinary bladder | Urothelial cells | High | Protein (IHC) | HPA → |
| Cerebellum | Purkinje cells | Medium | Protein (IHC) | HPA → |
| Cerebral cortex | Glial cells | Medium | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | Not detected | Protein (IHC) | HPA → |
| Bronchus | Respiratory epithelial cells | Not detected | Protein (IHC) | HPA → |
| Caudate | Glial cells | Not detected | Protein (IHC) | HPA → |
| Colon | Endothelial cells | Not detected | Protein (IHC) | HPA → |
Troubleshoot MAST4 staining in paraffin section IHC using compartment, cell type and antibody controls; IF considerations appear in one dedicated entry.
The anti-MAST4 catalog antibody has IHC data from paraffin-embedded human testis and IF data from COS7 cells (catalog image captions); listed reactivity covers human and mouse (catalog reactivity).
A11085-1 lists IHC, IF and ICC applications and human and mouse reactivity (catalog applications; catalog reactivity). Its IHC image shows paraffin-embedded human testis, and its IF image shows COS7 cells; both include peptide-blocked comparisons (catalog image captions).
Which to pick: For tissue IHC, choose A11085-1: its own image shows paraffin-embedded human testis, but does not report the fixative (catalog IHC image caption). For IF/ICC, the same rabbit polyclonal antibody lists both applications and has a COS7-cell IF image (catalog host; catalog dilution_raw; catalog applications; catalog IF image caption). For human or mouse samples, its reactivity list covers both species, while the supplied tissue IHC image documents human tissue only (catalog reactivity; catalog IHC image caption).