This website uses cookies to ensure you get the best experience on our website.
- Table of Contents
Plan MDM2 paraffin IHC around nuclear staining, using adipose adipocytes as a high-staining reference (HPA tissue IHC). The IHC-validated antibody M00054-3 has a recommended dilution range of 1:200–1:1000 (datasheet).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Nuclear tissue staining (HPA tissue IHC) | |
| Staining pattern | Nuclear staining across diverse tissue cell types (HPA tissue IHC) | |
| Antigen retrieval | Tris-EDTA pH 9.0 HIER, 95–98 °C, 20 min (rule: nuclear antigen) | |
| Positive control | Adipose tissue+4 more · see all | |
| Negative control | None in HPA (detected in all 45 tissues); use no-primary + isotype controls |
| Fixation | Keep fixation consistent across sections (standard IHC practice; not target-specific); Matched tissue-IHC evidence does not establish the fixation claim. Validate the specimen-specific method before use. (selected-SKU IHC image M00054-3) | |
| Caveat | Cancer-associated splice isoforms may affect antibody recognition (UniProt) | |
| Regulation | Expression regulation is unspecified (UniProt) | |
| Isoform / epitope | 11 isoforms; verify epitope coverage across splice forms (UniProt) |
Compare the catalog antibody’s IHC-P protocol (catalog datasheet) with published paraffin-section MDM2 methods from three articles (PMC8760962; PMC12061814; PMC10700221).
| Sample | Tissue sections; selected-image fixative not specified (standard IHC workflow) |
| Fixation | Image fixative and duration unreported (datasheet M00054-3); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat-induced epitope retrieval in Tris-EDTA buffer, pH 9.0, 20 min at 95–98 °C (standard rule: nuclear antigen) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% normal serum of the secondary host, 30 min, room temperature (standard) |
| Primary antibody | Rabbit anti-MDM2, 1:200-1:1000 (datasheet M00054-3) |
| Primary incubation | Overnight at 4 °C (standard) |
| Detection | HRP-polymer secondary, DAB chromogen 5–10 min (standard) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | MDM2-positive staining in adipocytes of adipose tissue (HPA tissue IHC: High). HPA tissue profile: Ubiquitous nuclear expression. No signal in the no-primary control. |
MDM2 is a non-membrane protein expressed predominantly in the nucleoplasm, with cytoplasmic and context-dependent nucleolar localization (UniProt Q00987: localization and topology). In paraffin-section IHC, expect widespread nuclear staining across tissues; HPA describes the tissue pattern as ubiquitous and rates it Supported because staining agrees with RNA expression (HPA: tissue IHC). High staining is documented in the specific cells listed below, but intensity should not be assumed uniform across every cell (HPA: tissue IHC).
| Nuclear staining in adipocytes, glandular cells, or hematopoietic cells. | This fits the expected compartment and documented high staining in adipocytes of adipose tissue and breast, glandular cells of adrenal gland and appendix, and bone-marrow hematopoietic cells (HPA: tissue IHC). Compare each cell population with its surrounding tissue; widespread expression does not imply identical intensity in every nucleus (HPA: ubiquitous nuclear expression). |
| Nuclear staining with some cytoplasmic staining. | The nuclear component fits routine tissue IHC (HPA: ubiquitous nuclear expression). A cytoplasmic component is biologically plausible because UniProt lists cytoplasm and HPA ICC-IF supports cytosol; those localization records alone do not establish the expected strength or distribution of cytoplasmic chromogenic staining in paraffin sections (UniProt Q00987: localization; HPA: subcellular ICC-IF). |
| Signal confined to cell borders, extracellular material, or other structures without convincing nuclei. | Treat this as a questionable MDM2 pattern: UniProt reports no transmembrane segment and predominantly nucleoplasmic localization, while HPA reports ubiquitous nuclear tissue staining (UniProt Q00987: topology and localization; HPA: tissue IHC). General IHC practice: inspect morphology and control staining before interpreting an isolated non-nuclear signal as positive. |
| Strong staining in an unexpected cell population while documented positive cells remain unstained. | Consider cross-reactivity or endogenous detection activity, then check controls and cell identity (general IHC practice). An unlisted cell type is not automatically negative: MDM2 is described as ubiquitous, and the supplied HPA tissue record has no negative-cell list (UniProt Q00987: tissue specificity; HPA: tissue IHC). |
| Diffuse staining across nuclei, cytoplasm, and surrounding tissue. | Poor compartment contrast makes the result hard to score against HPA's nuclear tissue pattern (HPA: tissue IHC). General IHC practice: evaluate background with appropriate negative controls and review blocking, antibody concentration, washes, and detection conditions before assigning cellular positivity. |
| Cell and tissue context | HPA reports ubiquitous nuclear expression with low RNA tissue specificity, and lists high staining in several distinct cell populations; choose a documented positive population for interpretation rather than assuming a negative reference tissue from this record (HPA: tissue IHC). |
| Subcellular location and topology | UniProt places MDM2 predominantly in the nucleoplasm, also lists cytoplasm and nucleolus, and reports no transmembrane segment; the nucleolar localization is linked to interaction with ARF(P14), so a nucleolar pattern should be interpreted in context (UniProt Q00987: localization and topology). |
| Isoforms | UniProt lists 11 isoforms and reports several cancer-associated isoforms absent from normal tissues; this record does not identify the antibody epitope or show which isoforms a given IHC reagent detects, so staining cannot assign an isoform (UniProt Q00987: isoforms and tissue specificity). |
| Antibody validation | HPA marks tissue IHC Supported for CAB000086, CAB016303, and CAB079977; that status supports the observed staining pattern for those antibodies, without establishing that every antibody will reproduce it (HPA: antibody validation; HPA: tissue IHC). |
| Fixation and retrieval evidence | Target-specific fixation sensitivity and retrieval conditions are unreported in the supplied UniProt and HPA records; no MDM2-specific change in epitope access or signal can be inferred from the reported topology, modifications, or tissue staining (UniProt Q00987: topology and modifications; HPA: tissue IHC). |
| IF/ICC Q&A: where should signal appear? | The separate IF/ICC guide should use nucleoplasm and cytosol as its main supported locations; HPA also reports additional locations in its ICC-IF record (HPA: subcellular ICC-IF). These observations do not provide an IF/ICC protocol for this IHC-P section. |
| Situation | Likely cause | Next action |
|---|---|---|
| No staining in a documented high-staining population. | The result conflicts with HPA's reported high staining in the chosen population; the cause cannot be determined from the tissue record alone (HPA: tissue IHC). | General IHC practice: check tissue identity and preservation, then review primary antibody, retrieval, detection reagents, and a positive control in the same run; document which step restores nuclear signal. |
| Only diffuse cytoplasmic staining appears. | UniProt allows cytoplasmic MDM2, but absence of convincing nuclei conflicts with the predominant nucleoplasmic and HPA tissue patterns (UniProt Q00987: localization; HPA: tissue IHC). | General IHC practice: inspect nuclei and negative controls, review antibody concentration and washes, and avoid scoring diffuse cytoplasm alone as a confirmed tissue-IHC positive. |
| Signal follows cell edges or extracellular deposits. | That distribution conflicts with HPA's nuclear tissue pattern and UniProt's lack of a transmembrane segment (HPA: tissue IHC; UniProt Q00987: topology). | General IHC practice: compare with a negative control, inspect section morphology, and review blocking and detection before attributing the deposit to MDM2. |
| One unlisted cell type stains strongly. | Unexpected cell-type staining may reflect cross-reactivity or detection background, but the record supplies no negative cell types and describes MDM2 as ubiquitous (HPA: tissue IHC; UniProt Q00987: tissue specificity). | General IHC practice: verify the cell type and controls, then compare nearby documented positive populations; do not classify the unlisted cells as false positives solely because HPA did not list them. |
| Brown signal obscures nuclear boundaries. | Excess background can prevent assessment of the nuclear pattern reported by HPA (HPA: tissue IHC). | General IHC practice: review chromogen development, counterstain, antibody concentration, blocking, and washes; repeat scoring only when nuclei and surrounding background can be distinguished. |
| Nucleolar staining dominates the section. | UniProt links nucleolar MDM2 localization to ARF(P14) interaction, whereas HPA describes the overall tissue pattern as ubiquitous nuclear expression (UniProt Q00987: localization; HPA: tissue IHC). | General IHC practice: verify that the puncta are within identifiable nuclei and compare controls; report the nucleolar distribution separately instead of assuming it is the routine tissue pattern. |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Supported — High consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | High | Protein (IHC) | HPA → |
| Adrenal gland | Glandular cells | High | Protein (IHC) | HPA → |
| Appendix | Glandular cells | High | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | High | Protein (IHC) | HPA → |
| Breast | Adipocytes | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| None in HPA: MDM2 is detected in all 45 scored tissues. Use a no-primary (secondary-only) and an isotype control instead. | ||||
Troubleshoot MDM2 staining in paraffin sections by checking retrieval, nuclear localisation, antibody specificity and scoring controls before interpreting chromogenic signal.
Two rabbit monoclonals have IHC tissue images (catalog IHC captions). Both list human, mouse, and rat reactivity (catalog reactivity); M00054-3 also lists IF, although no IF image is supplied (catalog applications/IF images).
M00054-3 will render with rat lung IHC; another caption shows human placenta, and its listed applications include IHC and IF (catalog: M00054-3 IHC captions/applications). P00054-2 will render with phospho-MDM2 (S166) IHC in a paraffin section of human breast cancer; other IHC captions show human lung cancer and mouse testis (catalog: P00054-2 IHC captions).
Which to pick: For total MDM2 tissue IHC, choose M00054-3, a rabbit monoclonal whose rendered caption shows rat lung staining but reports neither section processing nor fixative (catalog: M00054-3 description/IHC caption). For phospho-MDM2 (S166) tissue IHC, choose P00054-2; its caption specifies a paraffin section, EDTA retrieval at pH 8.0, and 1:50 primary antibody, but does not report the fixative (catalog: P00054-2 title/IHC caption). For IF, choose M00054-3 at the listed 1:200–1:1000 range; ICC validation is unlisted, and both SKUs list human, mouse, and rat reactivity for cross-species IHC planning (catalog applications/dilutions/reactivity).