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- Table of Contents
Plan MYDGF chromogenic IHC on paraffin sections using the reported cytoplasmic tissue pattern to interpret staining (HPA tissue IHC). The catalog antibody has an IHC-P working range of 2–5 μg/mL (datasheet A08602).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Cytoplasmic staining in most tissues (HPA tissue IHC) | |
| Staining pattern | Cytoplasmic staining in most tissues, including immune cells (HPA tissue IHC) | |
| Antigen retrieval | EDTA pH 8.0 HIER, heat-mediated (datasheet A08602) | |
| Positive control | Placenta+4 more · see all | |
| Negative control | Caudate+4 more · see all |
| Fixation | Keep fixation consistent across sections (standard IHC practice; not target-specific) | |
| Caveat | Secreted MYDGF may appear away from producing cells (UniProt) | |
| Regulation | Stimulus-linked changes unreported (UniProt) | |
| Isoform / epitope | No isoforms annotated; signal peptide 1–31 is cleaved (UniProt) |
The catalog antibody has an IHC-P protocol (datasheet A08602). The published options below cover fish retinal sections (PMC12346886) and human renal tissue (PMC12176760).
| Sample | Paraffin-embedded human colorectal adenocarcinoma tissue; fixative not specified (datasheet A08602) |
| Fixation | Image fixative and duration unreported (datasheet A08602); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: EDTA pH 8.0 (datasheet A08602); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A08602) |
| Primary antibody | Rabbit anti-MYDGF, 2-5 μg/ml (datasheet A08602) |
| Primary incubation | Overnight at 4 °C (datasheet A08602) |
| Detection | HRP-conjugated secondary, DAB chromogen (datasheet A08602) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | MYDGF-positive staining in decidual cells of placenta (HPA tissue IHC: High). HPA tissue profile: Cytoplasmic expression in most tissues, including immune cells. No signal in the no-primary control. |
MYDGF should show predominantly cytoplasmic staining across many tissues, including immune cells (HPA tissue IHC: Approved; medium consistency). High staining is reported in placental decidual cells; medium staining occurs in bone marrow hematopoietic cells and several glandular cell populations (HPA tissue IHC). MYDGF is secreted, has no transmembrane segment, and also localizes to the ER and Golgi pathway (UniProt Q969H8).
| Cytoplasmic signal in placental decidual cells, with weaker or variable staining elsewhere (HPA tissue IHC). | This fits the reported High decidual cell signal and broad cytoplasmic profile (HPA tissue IHC). Compare staining within identified cell populations; HPA reports Medium staining in bone marrow hematopoietic cells and selected glandular cells (HPA tissue IHC). |
| Strong nuclear-only staining or a crisp, continuous plasma-membrane rim (UniProt Q969H8 topology). | That pattern is difficult to reconcile with a secreted protein lacking a transmembrane segment (UniProt Q969H8). Review morphology and controls before calling it MYDGF; HPA tissue IHC supports cytoplasmic expression but does not establish a precise organelle pattern (HPA tissue IHC). |
| Apparent signal in cell populations reported as Not detected, such as glomerular cells or skeletal myocytes (HPA tissue IHC). | Treat these as cell-specific discrepancies, not proof that an entire organ must be negative (HPA tissue IHC). Cross-reactivity or endogenous chromogen-generating activity are possible technical explanations (general IHC practice); assess the matched negative control and staining distribution. |
| Uniform haze over cells and extracellular spaces, obscuring cell boundaries (general IHC practice). | Broad background can arise from nonspecific binding or detection chemistry (general IHC practice). MYDGF is secreted, so extracellular material alone cannot be ruled out biologically (UniProt Q969H8); require a convincing cellular pattern and clean controls before interpreting it. |
| No signal in placental decidual cells despite preserved tissue morphology (HPA tissue IHC: High). | A negative known-positive population makes this run inconclusive for MYDGF (HPA tissue IHC; general IHC practice). Check antibody application, retrieval and detection against the validated IHC procedure (general IHC practice); absence here does not establish biological absence elsewhere. |
| Secretory localization and topology (UniProt Q969H8). | A signal peptide and absent transmembrane segment support intracellular secretory-pathway and possible extracellular distribution (UniProt Q969H8). Do not require a membrane outline; HPA's tissue-level IHC description is cytoplasmic (HPA tissue IHC). |
| Protein processing (UniProt Q969H8). | The precursor has a signal peptide at residues 1–31; the annotated mature chain spans 32–173 (UniProt Q969H8). Interpret staining according to the antibody's documented epitope, if available; this payload provides none. |
| Tissue comparison strength (HPA tissue IHC). | HPA rates tissue staining Approved with medium RNA–protein consistency and cautions that secretion can separate protein from RNA location (HPA tissue IHC). Use cell-level IHC observations as reference patterns, not a strict RNA-based pass/fail rule. |
| IHC antibody evidence (HPA antibodies). | HPA041872 and HPA046744 each have Approved IHC status (HPA antibodies). The supplied status does not say IHC Enhanced; independent concordance or orthogonal confirmation should not be claimed from these entries alone. |
| IF/ICC interpretation question (HPA subcellular; HPA antibodies). | Can IHC define an IF/ICC pattern? No: HPA lists MYDGF as secreted, gives no main ICC location or image-bearing cell line, and lists no ICC status for either antibody (HPA subcellular; HPA antibodies). Evaluate IF/ICC on its own guide page. |
| Situation | Likely cause | Next action |
|---|---|---|
| Placental decidual cells stain weakly or remain blank (HPA tissue IHC: High). | A run-level staining failure is possible when a reported positive population is absent (HPA tissue IHC; general IHC practice). | Confirm tissue identity and morphology, then check the validated antibody dilution, retrieval, incubation and detection steps for this IHC run (general IHC practice). |
| Staining is mainly nuclear or forms a continuous membrane rim (UniProt Q969H8 topology). | This conflicts with the reported cytoplasmic IHC profile and lacks support from a transmembrane segment (HPA tissue IHC; UniProt Q969H8). | Inspect a matched negative control and repeat with the IHC-validated antibody; score only reproducible signal in morphologically identified cells (general IHC practice). |
| Glomerular cells or skeletal myocytes appear positive (HPA tissue IHC: Not detected). | Cell identity, nonspecific binding or endogenous detection activity may account for the discrepancy (general IHC practice). | Verify the cell population and compare a matched negative control; optimize blocking or endogenous activity quenching as appropriate for the detection system (general IHC practice). |
| Diffuse chromogen obscures the expected cell-level pattern (general IHC practice). | Excess nonspecific staining or detection background is possible (general IHC practice); secretion also complicates interpretation of extracellular signal (UniProt Q969H8). | Check negative controls, washing, antibody concentration and chromogen development; judge the result against identifiable cytoplasmic staining (general IHC practice; HPA tissue IHC). |
| A weak signal in lung macrophages is mistaken for a failed positive control (HPA tissue IHC: Low). | HPA reports Low macrophage staining in lung, while placental decidual cells are High (HPA tissue IHC). | Use the reported decidual cell pattern for a stronger tissue comparison; evaluate macrophages by cell identity and local background (HPA tissue IHC; general IHC practice). |
| A field labeled kidney is called wholly negative because glomerular cells lack stain (HPA tissue IHC). | The Not detected entry applies specifically to cells in glomeruli, not every renal cell (HPA tissue IHC). | Record the compartment and cell population scored; avoid extending a cell-specific HPA observation to the entire section (HPA tissue IHC). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Approved — Medium consistency between antibody staining and RNA expression data. At least one protein variant secreted, tissue location of RNA and protein might differ and correlation is complex.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Placenta | Decidual cells | High | Protein (IHC) | HPA → |
| Adrenal gland | Glandular cells | Medium | Protein (IHC) | HPA → |
| Appendix | Glandular cells | Medium | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | Medium | Protein (IHC) | HPA → |
| Cerebral cortex | Neuronal cells | Medium | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Caudate | Glial cells | Not detected | Protein (IHC) | HPA → |
| Cerebellum | Cells in granular layer | Not detected | Protein (IHC) | HPA → |
| Hippocampus | Glial cells | Not detected | Protein (IHC) | HPA → |
| Kidney | Cells in glomeruli | Not detected | Protein (IHC) | HPA → |
| Ovary | Ovarian stroma cells | Not detected | Protein (IHC) | HPA → |
These IHC troubleshooting questions focus on MYDGF staining in paraffin sections, with one entry on adapting the assay for IF.
A08602 has IHC data from human paraffin sections of colorectal adenocarcinoma, liver cancer, lung cancer, and placenta (catalog image captions). Human, mouse, and rat reactivity is listed (catalog: reactivity).
A08602 is the only SKU listed and has IHC images from human paraffin sections of colorectal adenocarcinoma, liver cancer, lung cancer, and placenta (catalog image captions). Its application list includes IHC but not IF/ICC (catalog: applications); the captions do not report a fixative (catalog image captions).
Which to pick: Choose A08602 for human paraffin-section IHC: its own captions show EDTA retrieval at pH 8.0 and primary antibody at 2 μg/ml (A08602 image captions). No SKU in this payload lists IF/ICC validation (catalog: applications), and A08602’s listed mouse and rat reactivity does not establish IHC validation in those species (catalog: reactivity; A08602 image captions). Clone information and the tissue fixative are unreported (catalog: clone field; A08602 image captions).