PLIN5 / Perilipin-5 · Western blot design guide

Design a Western Blot for PLIN5

Real validated PLIN5 Western blot protocols, expected-band and isoform facts, troubleshooting for weak or shifted signal, and recommended anti-PLIN5 WB antibodies. Everything you need to plan the experiment before you commit precious samples.

Evidence assembled September 2026 · For research use; verify linked source records and product datasheet before use
Western blot protocol sheet for PLIN5: expected band ~50.8 kDa, hero antibody A05479-1, catalog values and labelled standard workflow; separate PMC comparisons on the guide
Printable PLIN5 Western blot protocol sheet — expected band ~50.8 kDa, antibody A05479-1, controls and PMC citations. Open the full PLIN5 WB guide →

PLIN5 Western Blot Experimental Design Guide

Expected bands, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.

Must know before running
Expected band ~50.8 kDa
Observed band ~55 kDa
Gel 10% (catalog A05479-1)
Negative control ⓘ Suggested KO / knockdown lysate
Important caveats
Reasons your observed band may differ from the expected size.
PTM Phosphorylated
Caveat Phosphorylation-state controls
Gene-set association MSigDB C7 membership
Isoform 1 isoform(s)
Section 1

Real Curated PLIN5 Western Blot Protocols

The A05479-1 protocol combines labelled catalog values with standard starting conditions. Published comparisons retain their own sample, reagent and detection scope.

Recommended Western blot protocol parameters
Sample / lysatehuman MCF-7, human RT4, human HepG2 (catalog A05479-1)
Gel %10% (catalog A05479-1)
Load30 ug; reducing conditions (catalog A05479-1)
Transfera nitrocellulose membrane at 150 mA for 50-90 minutes (catalog A05479-1)
Membranenitrocellulose membrane (catalog A05479-1)
Blocking5% non-fat milk/TBS for 1.5 hour at RT (catalog A05479-1)
Primary antibodyA05479-1 · 0.5 μg/mL (catalog A05479-1)
Primary incubationovernight at 4°C (catalog A05479-1)
Secondary antibodygoat anti-rabbit IgG-HRP, 1:5000 (catalog A05479-1)
Secondary incubation1.5 hour at RT (catalog A05479-1)
WashTBS-0.1%Tween 3 times with 5 minutes each (catalog A05479-1)
DetectionECL (catalog A05479-1)
Section 2

What Is the Expected PLIN5 Western Blot Band Size?

PLIN5 is predicted at 50.8 kDa and observed at approximately 55 kDa; the cause of this difference is not established by the supplied features.

What am I looking at on my blot?
Band at approximately 55 kDaEmpirical PLIN5 band in reducing whole-cell and tissue lysates; confirm identity with antibody controls
Band near 50.8 kDaNear the predicted PLIN5 mass, though the supplied blot shows approximately 55 kDa
Higher-mass bandCould reflect retained PLIN5 homooligomers; identity requires confirmation
Weak band in a soluble fractionPLIN5 may partition with lipid droplets rather than remain in that fraction
Closely spaced bandsCould reflect PLIN5 phosphorylation states, but distinct migration is unproven
💡Expected PLIN5 appearancePLIN5 has a predicted mass of 50.8 kDa and an empirical band at approximately 55 kDa; the cause of the difference is unestablished, so confirm band identity with appropriate controls.
How each factor affects band size
Predicted PLIN5 mass50.8 kDa predicted; approximately 55 kDa observed on the supplied reducing blots
Phosphoserine at Ser2Could affect migration; no size shift is established
Phosphoserine at Ser148Could affect migration; no size shift is established
Phosphoserine at Ser322Could affect migration; no size shift is established
PLIN5 homooligomerizationCould yield a higher-mass band if oligomers persist during electrophoresis
Why is my band missing or off?
SituationLikely causeNext action
No band in lysatePLIN5 may be poorly recovered when lipid droplets are excludedCheck the lipid-droplet-containing fraction and verify lysate loading
Band higher than expectedRetained homooligomers are possible; the cause of the approximately 55 kDa band is unestablishedCompare reducing conditions and confirm band identity
Band lower than expectedThe supplied features do not establish a smaller PLIN5 productCheck sample integrity and confirm band identity
Multiple bandsPhosphorylation states are possible, but distinct bands are unprovenCompare phosphatase-treated and untreated samples with appropriate controls
Weak or no signalPLIN5 may partition with lipid dropletsCheck fraction recovery, loading, and antibody performance
Fragments below expected sizeSample degradation is possible; no PLIN5 cleavage product is specifiedCheck sample handling and verify smaller bands with an independent antibody

Sample controls for PLIN5 Western blot

🧪For positive controls for PLIN5 in Western blot, you can use an HPA-verified positive sample once tissue or cell data become available.
Positive control: No high/medium HPA tissue identified
Negative control: Suggested KO / knockdown lysate
Loading controls: Run GAPDH, β-actin, and a total-protein stain alongside the samples.
⚠️Feasibility: PLIN5 is lipid droplet associated, but the supplied HPA data cannot establish positive or negative sample controls.

HPA tissue expression evidence for PLIN5

Comprehensive Human Protein Atlas IHC scoring per tissue. Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.

Higher expression tissues · candidate positive controls from IHC

TissueCell typeLevelEvidenceSource
No high/medium HPA tissues identified in the supplied evidence.

Lower expression tissues · IHC evidence, not confirmed WB-negative controls

TissueCell typeLevelEvidenceSource
No lower-expression tissue rows available in the supplied evidence.
Section 3

Advanced PLIN5 Western Blot Tips

Deeper troubleshooting and optimisation questions for PLIN5, answered from its protein features.

How should PLIN5 band migration be interpreted?
Band shift · Use the separately labelled calculated mass and catalog-observed evidence above. A sequence annotation does not establish an observed migration shift. Verify target identity with orthogonal controls.
Could PLIN5 isoforms explain multiple bands?
Isoforms · UniProt lists one isoform and no alternative sequence here. These features do not support assigning multiple bands to PLIN5 isoforms; verify the identity of any additional band.
Which PLIN5 phosphorylation sites should I consider?
PTM · The listed sites are phosphoserine 2, 148, and 322 in UniProt numbering. Check the numbering convention before comparing them with antibody or paper descriptions. These sites do not, by themselves, predict a visible band shift.
Does this guide establish induction of PLIN5?
Induction · No general induction response is established by this guide. A pathway or gene-set association is not evidence of induction in a particular specimen. Verify the relevant treatment and control in a target-specific experiment.
How should transfer be checked for PLIN5?
Transfer · Standard workflow guidance: verify transfer efficiency for the intended target size before interpreting a weak signal. Use total-protein assessment and optimize transfer for the membrane, gel and apparatus; the labelled catalog values take precedence.
How should blocking be optimized?
Blocking · Standard workflow guidance: follow the A05479-1 datasheet where specified. Otherwise compare 5% milk or 5% BSA in TBST; for a phospho-specific assay start with BSA. Optimize background and specific signal with matched controls.
How should PLIN5 be quantified?
Quantitation · Standard workflow guidance: quantify only a validated target band within the linear exposure range. Use consistent sample preparation and loading, retain biological replicates, and avoid interpreting saturation or loading differences as regulation.
Why might PLIN5 appear near 55 kDa instead of 50.8 kDa?
Interpretation · The supplied observed band is approximately 55 kDa, while the predicted mass is 50.8 kDa. PLIN5 has three listed phosphoserines, but their presence alone does not establish the cause of this difference. Use the observed position as a reference and verify band identity independently.

PLIN5 associates with lipid droplet surfaces and exchanges with the cytoplasm; mitochondrion is also listed as a location. Keep the fraction analyzed consistent across samples, since a change in PLIN5 distribution could change the amount detected in that fraction.

Compare equivalent sample fractions under consistent loading conditions. Because PLIN5 is associated with lipid droplets and can exchange with the cytoplasm, a change in one fraction's signal need not reflect the same change in total PLIN5.

PLIN5 is annotated as a homooligomer, so oligomerization is a possible interpretation of a higher band. The annotation does not establish that an oligomer survives Western blot preparation. Confirm band identity before assigning it to PLIN5.

No signal peptide, propeptide, or alternative sequence is listed in the supplied features. They therefore provide no specific basis for assigning a lower band to a processed form or isoform of PLIN5. Verify the band's identity before interpreting it.
Boster reagents

PLIN5 Western Blot Antibodies

Catalog antibodies with Western blot application and product-specific WB images. Evaluate suitability with the reported sample, controls and experimental conditions.

Real WB data Western blot analysis of PLIN5 using anti-PLIN5 antibody (A05479-1). Electrophoresis was performed on a 10% SDS-PAGE gel at 80V (Stacking gel) / 120V (Resolving gel) for 2 hours. The sample well of each lane was loaded with 30 ug of sample under reducing conditions. Lane 1: human MCF-7 whole cell lysates, Lane 2: human RT4 whole cell lysates, Lane 3: human HepG2 whole cell lysates, Lane 4: human HT1080 whole cell lysates, Lane 5: rat liver tissue lysates, Lane 6: mouse liver tissue lysates. After electrophoresis, proteins were transferred to a nitrocellulose membrane at 150 mA for 50-90 minutes. Blocked the membrane with 5% non-fat milk/TBS for 1.5 hour at RT. The membrane was incubated with rabbit anti-PLIN5 antigen affinity purified polyclonal antibody (A05479-1) at 0.5 μg/mL overnight at 4°C, then washed with TBS-0.1%Tween 3 times with 5 minutes each and probed with a goat anti-rabbit IgG-HRP secondary antibody at a dilution of 1:5000 for 1.5 hour at RT. The signal is developed using an ECL Plus Western Blotting Substrate (Catalog # AR1196-200) with Tanon 5200 system. A specific band was detected for PLIN5 at approximately 55 kDa. The expected band size for PLIN5 is at 51 kDa.
Anti-PLIN5 Antibody Picoband®
Cat # A05479-1

A05479-1 is a rabbit anti-PLIN5 polyclonal antibody. Its supplied Western blot image shows a band near 55 kDa (expected 51 kDa) in human cell and rat and mouse liver lysates. No independent publication evidence is supplied.

Which to pick: A05479-1 is the only listed option. Its stated reactivity covers human, mouse, and rat; the WB image documents human MCF-7, RT4, HepG2, and HT1080 cells, plus rat and mouse liver, under the reported conditions.

Source: BosterBio PLIN5 gene-info card — filtered to Western-blot-capable antibodies; each card shows that product's actual WB validation figure.