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- Table of Contents
Plan PPP2R1B chromogenic IHC in paraffin sections using the reported cytoplasmic tissue pattern (HPA tissue IHC). Compare appendix glandular cells with high staining against salivary gland glandular cells with no detected staining, and start the catalog antibody at 1:25 (HPA tissue IHC; datasheet M05756).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Cytoplasmic staining in most tissues (HPA tissue IHC) | |
| Staining pattern | Cytoplasmic staining in cells across most tissues (HPA tissue IHC) | |
| Antigen retrieval | Citrate pH 6 HIER, heat-mediated (datasheet M05756) | |
| Positive control | Appendix+4 more · see all | |
| Negative control | Salivary gland+1 more · see all |
| Fixation | Use formaldehyde-fixed paraffin sections (selected-SKU IHC image M05756); keep fixation consistent (standard IHC practice; not target-specific) | |
| Caveat | Staining–RNA agreement is medium; verify controls (HPA tissue IHC) | |
| Regulation | Liver RNA is tissue enhanced (HPA tissue RNA) | |
| Isoform / epitope | 5 isoforms; epitope coverage is unspecified (UniProt; datasheet M05756) |
The catalog antibody protocol uses citrate pH 6 heat retrieval (datasheet M05756). The published IHC protocols below report additional sample preparation and detection details (PMC10908207; PMC4558495).
| Sample | Formaldehyde-fixed, paraffin-embedded tissue sections (datasheet M05756; sample unspecified) |
| Fixation | Image formalin-fixed; duration unreported (datasheet M05756); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: Citrate pH 6 (datasheet M05756); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% normal serum of the secondary host, 30 min, room temperature (standard) |
| Primary antibody | Mouse monoclonal (clone 1496CT356.164.25.226) anti-PPP2R1B, 1:25 (datasheet M05756) |
| Primary incubation | 1 hours at 37°C (datasheet M05756) |
| Detection | HRP-polymer secondary, DAB chromogen 5–10 min (standard) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | PPP2R1B-positive staining in glandular cells of appendix (HPA tissue IHC: High). HPA tissue profile: Cytoplasmic expression in most tissues. No signal in the no-primary control. |
PPP2R1B should show predominantly cytoplasmic staining in most tissues, with high staining reported in appendix glandular cells, tonsil germinal center cells, and late spermatids in testis (HPA: tissue IHC). HPA rates its tissue IHC profile Approved, with medium agreement between staining and RNA data; external verification is pending (HPA: reliability). PPP2R1B has no transmembrane segment, while UniProt does not assign a subcellular location (UniProt P30154: topology and localization).
| Cytoplasmic staining in appendix glandular cells, tonsil germinal center cells, or late spermatids. | This fits the reported high IHC signal in these cells (HPA: tissue IHC). Compare stained cells with the section’s morphology and a negative detection control (general IHC practice). |
| A predominantly nuclear, extracellular, or sharply membrane-only chromogenic pattern. | This does not match HPA’s broad cytoplasmic tissue IHC profile (HPA: tissue IHC). Membrane signal alone is not conclusive: HPA also reports plasma membrane localization by ICC-IF (HPA: subcellular). Check controls before assigning the signal to PPP2R1B (general IHC practice). |
| Strong staining in salivary glandular cells or smooth muscle cells. | HPA reports these cell populations as not detected (HPA: tissue IHC). Cross-reactivity or endogenous detection activity is possible; review morphology and detection controls (general IHC practice). A single discordant section does not establish the cause. |
| Diffuse chromogen across cells and surrounding tissue, with poor cellular boundaries. | This is difficult to score as the reported cytoplasmic pattern (HPA: tissue IHC). Incomplete blocking, insufficient washing, or excess antibody or detection reagent can raise background (general IHC practice); compare the negative detection control. |
| No signal in appendix glandular cells, tonsil germinal center cells, or late spermatids. | These are reported high-staining populations (HPA: tissue IHC). Check that the expected cells are present, then review antibody conditions, retrieval, and detection with a control section (general IHC practice). HPA’s Approved profile still awaits external verification (HPA: reliability). |
| Tissue and cell population | HPA reports high signal in three distinct cell populations, medium signal in several others, and no detection in salivary glandular or smooth muscle cells (HPA: tissue IHC). Select and score controls by cell type rather than by whole-tissue color alone (general IHC practice). |
| IHC versus IF/ICC localization | For IHC, expect the reported cytoplasmic tissue pattern (HPA: tissue IHC). For IF/ICC, is membrane staining plausible? Yes: plasma membrane and cytosol are both approved locations (HPA: subcellular). Interpret each application against its own evidence. |
| Antibody validation | Two listed rabbit polyclonal antibodies have Approved IHC status; one also has Approved ICC status (HPA: antibodies). The tissue profile has medium agreement with RNA data and awaits external verification (HPA: reliability). Treat an unexpected pattern as unresolved until controls and independent evidence agree. |
| Molecular context | UniProt lists five isoforms, no signal peptide, no transmembrane segment, and no annotated subcellular location (UniProt P30154). These facts do not specify an IHC epitope, retrieval requirement, isoform-specific staining pattern, or fixation sensitivity. |
| Situation | Likely cause | Next action |
|---|---|---|
| High-staining reference cells are blank. | Expected cells may be absent from the section, or an IHC workflow step may have failed (HPA: high-staining cells; general IHC practice). | Confirm cell identity on the counterstained section; check the antibody conditions, retrieval, and detection against a known-positive control (general IHC practice). |
| Most of the section is diffusely colored. | Nonspecific reagent binding, inadequate washing, or excess detection signal can obscure cell boundaries (general IHC practice). | Compare a negative detection control; review blocking, washes, antibody concentration, and chromogen development (general IHC practice). |
| Salivary glandular or smooth muscle cells stain strongly. | Those cells were not detected in the HPA tissue profile; staining may be nonspecific or arise from endogenous detection activity (HPA: tissue IHC; general IHC practice). | Check the cell identity and negative detection control; if using enzyme detection, assess the relevant endogenous activity (general IHC practice). |
| The signal appears predominantly nuclear. | A nuclear-dominant result differs from HPA’s cytoplasmic tissue profile; its source cannot be determined from localization alone (HPA: tissue IHC). | Inspect morphology, background, and controls; repeat with adjusted antibody and detection conditions if needed (general IHC practice). |
| Membrane outlining dominates the IHC slide. | HPA reports plasma membrane localization in ICC-IF, but describes tissue IHC as cytoplasmic in most tissues (HPA: subcellular; HPA: tissue IHC). | Record both compartment and cell type; compare IHC controls before deciding whether the membrane signal is specific (general IHC practice). |
| Positive and negative tissue controls look alike. | The run cannot resolve the HPA-reported difference between high-staining cells and cells listed as not detected (HPA: tissue IHC). | Verify that the intended cell populations are represented and assess negative detection controls, staining conditions, and scoring thresholds (general IHC practice). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Approved — Medium consistency between antibody staining and RNA expression data. Pending external verification.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Appendix | Glandular cells | High | Protein (IHC) | HPA → |
| Testis | Elongated or late spermatids | High | Protein (IHC) | HPA → |
| Tonsil | Germinal center cells | High | Protein (IHC) | HPA → |
| Adrenal gland | Glandular cells | Medium | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | Medium | Protein (IHC) | HPA → |
Troubleshoot PPP2R1B staining in paraffin sections by checking retrieval, cellular localisation and controls before comparing staining across samples.
M05756 has documented IHC staining in human spleen sections and IF staining in human U-2 OS cells; its catalog lists human, mouse and rat reactivity (M05756 IHC caption; M05756 IF caption; catalog reactivity).
The rendered SKU, M05756, shows IHC staining in paraffin-embedded human spleen sections; its caption reports formaldehyde fixation and also describes the sections as paraformaldehyde-fixed (M05756 IHC caption). Its IF image shows cytoplasmic staining in U-2 OS cells, and its listed applications include IHC-P and IF (M05756 IF caption; catalog applications).
Which to pick: Choose M05756 for paraffin-section IHC because its own figure documents staining in human spleen sections (M05756 IHC caption). Choose M05756 for IF/ICC because its own IF figure documents staining in U-2 OS cells (M05756 IF caption). For cross-species planning, M05756 lists human, mouse and rat reactivity, although the supplied IHC and IF images show human samples only (catalog reactivity; M05756 IHC and IF captions).