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- Table of Contents
Plan RCC1 staining in paraffin sections around the general nuclear tissue pattern (HPA tissue IHC). Use the catalog antibody’s documented IHC-P conditions and account for RCC1 binding to mitotic chromosomes when interpreting staining (datasheet A02719-1; UniProt).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | General nuclear tissue staining (HPA tissue IHC) | |
| Staining pattern | Nuclear staining across many tissue cell types (HPA tissue IHC) | |
| Antigen retrieval | EDTA pH 8.0 HIER, heat-mediated (datasheet A02719-1) | |
| Positive control | Adrenal gland+4 more · see all | |
| Negative control | None in HPA (detected in all 45 tissues); use no-primary + isotype controls |
| Fixation | Keep fixation consistent across sections (standard IHC practice; not target-specific) | |
| Caveat | Mitotic chromosome binding may change the nuclear pattern (UniProt) | |
| Regulation | Expression regulation not annotated (UniProt) | |
| Isoform / epitope | Two isoforms; epitope coverage unspecified (UniProt) |
Compare the catalog antibody’s IHC-P protocol (datasheet A02719-1) with four published RCC1 paraffin-section methods (PMC5964113; PMC8051708; PMC8674189; PMC12804135).
| Sample | Paraffin-embedded human rectal cancer tissue; fixative not specified (datasheet A02719-1) |
| Fixation | Image fixative and duration unreported (datasheet A02719-1); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: EDTA pH 8.0 (datasheet A02719-1); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A02719-1) |
| Primary antibody | Rabbit anti-RCC1, 0.5-1μg/ml (datasheet A02719-1) |
| Primary incubation | Overnight at 4 °C (datasheet A02719-1) |
| Detection | Streptavidin-biotin complex (SABC), DAB chromogen (datasheet A02719-1) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | RCC1-positive staining in glandular cells of adrenal gland (HPA tissue IHC: High). HPA tissue profile: General nuclear expression. No signal in the no-primary control. |
RCC1 should stain predominantly in interphase nuclei and associate with mitotic chromosomes (UniProt P18754 localization). In paraffin-section IHC, expect nuclear staining across many cell types, with high staining reported in several glandular and epithelial populations (HPA: general nuclear expression; High in listed glandular and epithelial cells). HPA rates the tissue pattern Enhanced, with high consistency between staining and RNA expression (HPA: Enhanced). RCC1 has no transmembrane segment (UniProt P18754 topology).
| Nuclear staining in breast or adrenal glandular cells. | This matches reported high staining in these cells and RCC1’s predominant interphase location (HPA: High; UniProt P18754 localization). Judge the stained nuclei against the tissue’s counterstain and local background (general IHC practice). |
| Staining follows condensed chromosomes in a mitotic cell. | Chromosome-associated RCC1 is expected during mitosis (UniProt P18754 localization). Interpret this alongside surrounding interphase nuclei: a small mitotic focus can look different from the broader nuclear pattern (UniProt P18754 localization; general IHC practice). |
| Strong cytoplasmic staining dominates while nuclei appear unstained. | Cytoplasm is listed as a possible location, so cytoplasmic signal alone is not proof of artefact (UniProt P18754 localization). A cytoplasm-only result conflicts with the predominant interphase nuclear pattern; check morphology and controls before scoring it as RCC1 (UniProt P18754 localization; general IHC practice). |
| Strong signal is confined to an unexpected cell population while reference cells are blank. | For example, high cardiomyocyte staining with absent breast glandular staining reverses the reported contrast (HPA: Low in cardiomyocytes; High in breast glandular cells). Consider cross-reactivity or endogenous detection activity, and verify with detection controls (general IHC practice). |
| No discernible nuclear signal in a high-staining reference tissue. | Absent signal in breast glandular cells or bronchial respiratory epithelial cells disagrees with the reported high pattern (HPA: High in both). Confirm tissue preservation and controls, then review retrieval and detection conditions as general IHC checks; the sources do not report RCC1-specific fixation sensitivity. |
| Cell-cycle location | RCC1 is predominantly nuclear in interphase and binds mitotic chromosomes (UniProt P18754 localization). Compare each staining pattern with nuclear morphology before treating variation within a section as technical failure (general IHC practice). |
| Tissue and cell population | HPA reports general nuclear expression and low RNA tissue specificity, yet its sampled cell populations range from High in breast glandular cells to Low in cardiomyocytes (HPA: tissue IHC). A low-staining cell population is a weak negative control, not evidence that the tissue lacks RCC1. |
| Antibody validation | HPA027573 and CAB015413 have Enhanced IHC validation; HPA027574 is Supported for IHC (HPA: antibody validation). These ratings support the reported pattern for those antibodies; they do not establish that every catalog antibody will reproduce it. |
| Molecular features and epitope uncertainty | UniProt lists two isoforms, no signal peptide or transmembrane segment, and several N-terminal modifications (UniProt P18754). The supplied records do not map the catalog antibody’s epitope, so they cannot predict isoform recognition, retrieval needs, or fixation sensitivity. |
| Situation | Likely cause | Next action |
|---|---|---|
| Reference tissue shows no nuclear signal. | The result conflicts with reported high staining in breast glandular cells (HPA: High); the cause cannot be assigned from HPA alone. | Check a known-positive section and detection controls, then review the antibody’s stated IHC conditions and the run’s retrieval and detection steps (general IHC practice). Do not infer an RCC1-specific fixation effect. |
| Brown signal spreads across nuclei, cytoplasm and empty areas. | Diffuse staining without cellular boundaries suggests nonspecific background or detection activity (general IHC practice). | Compare with a section omitting primary antibody; review blocking, washes and chromogen development (general IHC practice). Score RCC1 only where the cellular pattern is interpretable. |
| Cytoplasmic signal is stronger than nuclear signal throughout the section. | A cytoplasm-only pattern differs from predominant interphase nuclear localization, although cytoplasm is also listed (UniProt P18754 localization). | Use the counterstain to confirm compartment boundaries and compare a high-staining reference population plus detection controls (general IHC practice; HPA: High in listed cells). |
| Low-staining cells look stronger than the expected reference cells. | This reverses an HPA contrast if, for example, cardiomyocytes exceed breast glandular cells (HPA: Low in cardiomyocytes; High in breast glandular cells). Cross-reactivity or endogenous detection activity is possible (general IHC practice). | Inspect tissue identity and morphology, compare a no-primary control, and avoid calling the unexpected signal specific without corroboration (general IHC practice). |
| Only occasional condensed structures stain strongly. | RCC1 binds mitotic chromosomes, which can produce a concentrated pattern in mitotic cells (UniProt P18754 localization). | Check whether the structures are mitotic chromosomes and assess interphase nuclei separately (UniProt P18754 localization; general IHC practice). |
| Q: Should an IF/ICC image show the same chromogenic pattern? | HPA reports nucleoplasmic localization by ICC-IF, while this guide’s primary application is paraffin-section IHC (HPA: nucleoplasm, enhanced; HPA: tissue IHC). | A: Expect nucleoplasmic fluorescence in ICC-IF (HPA: nucleoplasm, enhanced). Use the separate IF/ICC guide for that application; this section supplies no IF/ICC protocol. |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Enhanced — High consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adrenal gland | Glandular cells | High | Protein (IHC) | HPA → |
| Breast | Glandular cells | High | Protein (IHC) | HPA → |
| Bronchus | Respiratory epithelial cells | High | Protein (IHC) | HPA → |
| Cervix | Glandular cells | High | Protein (IHC) | HPA → |
| Endometrium | Glandular cells | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| None in HPA: RCC1 is detected in all 45 scored tissues. Use a no-primary (secondary-only) and an isotype control instead. | ||||
Troubleshoot RCC1 staining in paraffin sections by checking retrieval, nuclear localisation, controls, and scoring before interpreting signal (datasheet A02719-1; HPA tissue IHC).
Both catalog antibodies have human paraffin-section IHC images; A02719-1 also has mouse lung IHC and human cell and tissue IF images (catalog image captions).
A02719-1 has IHC images from human rectal and lung cancer and mouse lung, plus IF images from HeLa cells and human intestine cancer tissue (A02719-1 image captions). M02719-2 has IHC images from human thyroiditis, colorectal adenocarcinoma, breast cancer and spleen, plus an IF image from A431 cells (M02719-2 image captions).
Which to pick: For human tissue IHC, both SKUs have paraffin-section images: A02719-1 is rabbit hosted, while M02719-2 is mouse monoclonal (catalog host and clone fields; respective IHC image captions). For IF/ICC, both list those applications and have human IF images; A02719-1 also lists mouse and rat reactivity and has a mouse lung IHC image, making it the better documented cross-species IHC choice (catalog applications and reactivity; respective image captions). The IHC captions identify paraffin sections but do not report the fixative for either SKU (respective IHC image captions).