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- Table of Contents
Plan REC8 paraffin IHC around nuclear staining in testis and ciliary-rootlet staining in ciliated cells (HPA tissue IHC). The guide covers fixation, chromogenic detection and interpretation of a tissue staining profile with low concordance with RNA expression (HPA tissue IHC).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Nuclear in testis; cytoplasmic in several tissues (HPA tissue IHC) | |
| Staining pattern | Testis nuclei; ciliary rootlets in ciliated cells (HPA tissue IHC) | |
| Antigen retrieval | EDTA pH 8.0 HIER, heat-mediated (datasheet A04915-2) | |
| Positive control | Bronchus+4 more · see all | |
| Negative control | Adipose tissue+4 more · see all |
| Fixation | Keep fixation consistent across sections. (standard IHC practice; not target-specific) | |
| Caveat | Staining has low concordance with RNA expression (HPA tissue IHC) | |
| Regulation | Chromosome signal shifts with meiotic stage (UniProt) | |
| Isoform / epitope | 2 isoforms; epitope differences are unreported (UniProt) |
The catalog antibody’s IHC-P protocol uses EDTA pH 8.0 retrieval (datasheet A04915-2). Published REC8 IHC methods cover gastric cancer tissue and human testis (PMC7507279; PMC5241426; PMC9673495).
| Sample | Paraffin-embedded human placenta tissue; fixative not specified (datasheet A04915-2) |
| Fixation | Image fixative and duration unreported (datasheet A04915-2); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: EDTA pH 8.0 (datasheet A04915-2); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A04915-2) |
| Primary antibody | Rabbit anti-REC8, 0.5-1μg/ml (datasheet A04915-2) |
| Primary incubation | Overnight at 4 °C (datasheet A04915-2) |
| Detection | Streptavidin-biotin complex (SABC), DAB chromogen (datasheet A04915-2) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | REC8-positive staining in ciliated cells (ciliary rootlets) of bronchus (HPA tissue IHC: High). HPA tissue profile: Nuclear expression in testis with cytoplasmic expression in several tissues. No signal in the no-primary control. |
REC8 is a nuclear, chromosome-associated protein without a transmembrane segment (UniProt O95072: location and topology). In paraffin-section IHC, expect nuclear expression in testis, where elongated or late spermatids show high staining; HPA also reports high ciliary-rootlet staining in several epithelia (HPA: tissue IHC). Treat these as observed patterns, not fully verified specificity: HPA rates its tissue profile Approved but reports low consistency with RNA data and pending external verification (HPA: reliability).
| Distinct nuclear staining in testis, with strong signal associated with elongated or late spermatids. | This fits HPA's nuclear testis profile and high staining in that cell category (HPA: tissue IHC). REC8's chromosome association supports a nuclear interpretation (UniProt O95072: location). HPA does not resolve the stained cells by meiotic stage, so do not assign a particular stage from this chromogenic pattern alone. |
| Strong signal at ciliary rootlets in bronchus, fallopian tube or nasopharynx. | HPA records this cytoplasmic pattern as High in ciliated cells (HPA: tissue IHC). It differs from UniProt's nuclear and chromosome locations and from HPA's approved nucleoplasmic ICC-IF location (UniProt O95072: location; HPA: subcellular). Record it separately from nuclear staining; HPA's pending external verification limits a target-specific interpretation (HPA: reliability). |
| Prominent cytoplasmic staining outside the reported ciliary-rootlet pattern, or staining in an unexpected cell population. | Compare the exact compartment and cell type with HPA observations before scoring it as REC8 (HPA: tissue IHC). An unreported pattern raises possible cross-reactivity or endogenous detection activity (general IHC practice). The reported ciliary-rootlet pattern alone must not be dismissed as artefact (HPA: tissue IHC). |
| Diffuse colour across tissue, including regions expected to be unstained. | A poorly confined signal is difficult to score as nuclear or ciliary-rootlet staining (HPA: tissue IHC; general IHC practice). Background may arise from detection reagents, insufficient blocking or overly strong staining conditions (general IHC practice). Check controls before treating weak diffuse colour as a positive result. |
| No visible signal in a testis section used as a positive control. | HPA reports high staining in elongated or late spermatids and nuclear expression in testis (HPA: tissue IHC). First confirm those cells are present in the section, then check retrieval, antibody dilution and detection with the antibody's IHC-P instructions (general IHC practice). A negative run alone cannot establish absent REC8. |
| Cell identity and meiotic stage | REC8 occupies chromosome axes during meiotic prophase, then persists at centromeres through metaphase II (UniProt O95072: location). HPA instead reports its strongest testis IHC staining in elongated or late spermatids (HPA: tissue IHC). Keep the mechanistic stage description and observed tissue staining distinct; morphology alone does not reconcile them. |
| Confidence in tissue patterns | The tissue profile is Approved, but HPA reports low consistency between antibody staining and RNA expression and says external verification is pending (HPA: reliability). Two listed antibodies have Approved IHC status, HPA031727 and HPA031729; neither is listed as IHC Enhanced in the supplied record (HPA: antibodies). Use compartment and tissue controls when judging an unusual signal. |
| Isoforms and phosphorylation | UniProt lists two isoforms and a phosphoserine at residue 148 (UniProt O95072: isoforms and modified residues). Without an antibody epitope or isoform-reactivity record here, neither fact predicts which cells will stain or whether staining intensity will change. Do not infer epitope access or retrieval sensitivity from these annotations. |
| IF/ICC: what location should be compared? | HPA's approved ICC-IF location is the nucleoplasm, with images listed for A-431, U-251MG and U2OS (HPA: subcellular). This supports a nuclear comparison for an IF result, while the present guide's tissue decisions concern chromogenic IHC. The ICC-IF entry does not provide an IF protocol or validate the ciliary-rootlet IHC pattern. |
| Situation | Likely cause | Next action |
|---|---|---|
| Testis positive control has no signal. | The section may lack the HPA-reported elongated or late spermatids, or the IHC workflow may have failed (HPA: tissue IHC; general IHC practice). | Check cell morphology and slide controls; then review the IHC-validated antibody's retrieval, dilution and detection instructions (general IHC practice). Do not infer REC8 absence from this run. |
| Signal is mainly cytoplasmic in testis. | That differs from HPA's nuclear testis profile and UniProt's nuclear location (HPA: tissue IHC; UniProt O95072: location). Background or cross-reactivity is possible (general IHC practice). | Score nuclear and cytoplasmic colour separately. Inspect a no-primary control and repeat with the IHC-validated antibody's stated conditions (general IHC practice). |
| Ciliated epithelium shows strong rootlet staining. | HPA reports High staining at ciliary rootlets in bronchus, fallopian tube and nasopharynx, despite its separate nuclear testis profile (HPA: tissue IHC). | Record the cell type and rootlet location precisely. Interpret target specificity cautiously because HPA reports low RNA–staining consistency and pending external verification (HPA: reliability). |
| Colour appears in a reported negative cell population. | A mismatch may reflect cross-reactivity, endogenous detection activity or background (general IHC practice). HPA lists adipocytes and heart cardiomyocytes as Not detected (HPA: tissue IHC). | Confirm the cell identity, inspect no-primary and detection controls, and compare the same compartment across sections before scoring it as positive (general IHC practice). |
| Weak, diffuse staining obscures nuclei. | Poor signal separation can follow excessive detection development, insufficient blocking or an unsuitable antibody concentration (general IHC practice). | Review development time, blocking and the IHC-validated antibody's stated dilution; use a nuclear counterstain to assess compartment and morphology (general IHC practice). |
| An IF image appears nuclear while IHC highlights ciliary rootlets. | HPA reports approved nucleoplasmic ICC-IF localisation and high ciliary-rootlet tissue IHC staining (HPA: subcellular and tissue IHC). The supplied records do not explain the difference. | Compare each result within its own application and cell context; document the discrepancy and HPA's pending external verification without assigning a new REC8 location (HPA: reliability; general interpretation practice). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Approved — Low consistency between antibody staining and RNA expression data. Pending external verification.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Bronchus | Ciliated cells (ciliary rootlets) | High | Protein (IHC) | HPA → |
| Fallopian tube | Ciliated cells (ciliary rootlets) | High | Protein (IHC) | HPA → |
| Nasopharynx | Ciliated cells (ciliary rootlets) | High | Protein (IHC) | HPA → |
| Testis | Elongated or late spermatids | High | Protein (IHC) | HPA → |
| Adrenal gland | Glandular cells | Medium | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Appendix | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Cerebellum | Cells in granular layer | Not detected | Protein (IHC) | HPA → |
| Heart muscle | Cardiomyocytes | Not detected | Protein (IHC) | HPA → |
| Hippocampus | Glial cells | Not detected | Protein (IHC) | HPA → |
Troubleshoot REC8 chromogenic IHC in paraffin sections using the catalog antibody’s tissue protocol, while treating staining patterns as provisional where validation is limited.
A04915-2 has IHC images from paraffin sections of human placenta, human testicular cancer, and rat lung; no IF/ICC data are supplied (catalog: A04915-2 applications and image captions).
A04915-2 is the only SKU listed and is validated for IHC, with images from human placenta and human testicular cancer paraffin sections (catalog: A04915-2 applications and image captions). Its IHC images also include rat lung paraffin sections; the catalog lists human and rat reactivity (catalog: A04915-2 image captions and reactivity).
Which to pick: Choose A04915-2 for tissue IHC on paraffin sections, starting at 0.5–1 μg/ml; its captions describe EDTA retrieval at pH 8.0, but do not report the fixative (datasheet: A04915-2 IHC dilution; A04915-2 image captions). No listed SKU has IF/ICC validation or an IF figure, so this payload does not support an IF/ICC recommendation (catalog: A04915-2 applications and image captions). For human and rat IHC, A04915-2 is the available choice; it is a rabbit antibody with no clone specified (catalog: A04915-2 reactivity, host, and clone).