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- Table of Contents
Plan chromogenic TAB2 IHC in paraffin sections using the observed cytoplasmic tissue pattern (HPA tissue IHC). Compare staining across cell types, including strongly stained lung macrophages (HPA tissue IHC), while keeping fixation consistent across sections (standard IHC practice).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | General cytoplasmic staining (HPA tissue IHC) | |
| Staining pattern | Cytoplasmic staining across multiple cell types (HPA tissue IHC) | |
| Antigen retrieval | EDTA pH 8.0 HIER, heat-mediated (datasheet A02499-1) | |
| Positive control | Bone marrow+4 more · see all | |
| Negative control | None in HPA (detected in all 45 tissues); use no-primary + isotype controls |
| Fixation | Keep formalin fixation consistent across sections (standard IHC practice; not target-specific) | |
| Caveat | Lung macrophages stain strongly and may dominate the field (HPA tissue IHC) | |
| Regulation | IL1 shifts location; abundance effect unknown (UniProt) | |
| Isoform / epitope | Two isoforms; epitope coverage is unspecified (UniProt) |
The catalog antibody’s IHC-P protocol is accompanied by published TAB2 staining protocols for adult mouse cryosections and cervical carcinoma sections (PMC2770139; PMC8266450).
| Sample | Paraffin-embedded human rectal cancer tissue; fixative not specified (datasheet A02499-1) |
| Fixation | Image fixative and duration unreported (datasheet A02499-1); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: EDTA pH 8.0 (datasheet A02499-1); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A02499-1) |
| Primary antibody | Rabbit anti-TAB2, 2-5μg/ml (datasheet A02499-1) |
| Primary incubation | Overnight at 4 °C (datasheet A02499-1) |
| Detection | Streptavidin-biotin complex (SABC), DAB chromogen (datasheet A02499-1) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | TAB2-positive staining in hematopoietic cells of bone marrow (HPA tissue IHC: High). HPA tissue profile: General cytoplasmic expression. No signal in the no-primary control. |
TAB2 is reported in the cytosol and at membranes, including endosome and lysosome membranes; it has no transmembrane segment (UniProt Q9NYJ8). In tissue sections, expect predominantly cytoplasmic staining across many cell types, with particularly strong staining reported in lung macrophages, bone marrow hematopoietic cells and several epithelia (HPA: tissue IHC). HPA rates its tissue profile Approved, with medium consistency between antibody staining and RNA expression (HPA: tissue IHC).
| Cytoplasmic staining in lung macrophages or bone marrow hematopoietic cells, with some cell-to-cell variation. | This fits HPA's general cytoplasmic profile and High staining in these cells (HPA: tissue IHC). Read intensity relative to nearby cells and the section's background; High is an HPA category, not a required score for every specimen. |
| Cytoplasmic staining in respiratory epithelium, glandular epithelium or placental trophoblasts. | These are plausible positive cells: HPA reports High staining in bronchus and nasopharynx respiratory epithelium, endometrium and epididymis glands, pancreatic exocrine glands, and placental trophoblasts (HPA: tissue IHC). Their appearance can differ by tissue and assay conditions. |
| Predominantly nuclear staining, or a sharp cell-surface rim without convincing cytoplasmic staining. | This is discordant with the reported cytosolic and membrane-associated locations (UniProt Q9NYJ8). Check morphology, counterstain, detection controls and antibody specificity before calling it TAB2; membrane association alone does not predict a continuous surface rim (UniProt Q9NYJ8 topology). |
| Strong signal concentrated in cells outside the expected positive population, especially when the rest of the section is weak. | Consider cross-reactivity or endogenous detection activity (standard IHC practice). TAB2 is widely expressed (UniProt Q9NYJ8), and HPA reports low tissue specificity (HPA: tissue IHC), so an unlisted cell type is not automatically a false positive. Check its compartment and controls. |
| Diffuse haze across tissue and empty spaces, or no staining in an HPA High tissue. | Diffuse haze does not match HPA's cellular cytoplasmic profile (HPA: tissue IHC) and suggests background (standard IHC practice). An absent signal in an HPA High cell population warrants a run check, but HPA categories do not guarantee positivity in every specimen (HPA: tissue IHC). |
| Cellular location and stimulation | TAB2 is reported in cytosol and on membranes; IL1 stimulation can move it from membrane to cytosol, while TRIM38 interaction can move it toward endosome and lysosome (UniProt Q9NYJ8). A static tissue section cannot establish which event occurred. |
| Tissue and cell population | HPA reports Low tissue specificity and a general cytoplasmic profile, with High and Low staining in different listed cell populations (HPA: tissue IHC). Choose a clearly identified High population for a comparison control; interpret weaker cells in their tissue context. |
| IHC evidence and IF limit | Two listed rabbit polyclonal antibodies, HPA065436 and HPA070137, have IHC Approved status (HPA: antibodies). HPA provides no main ICC-IF location or ICC-IF images here (HPA: subcellular), so this evidence does not establish an IF pattern. |
| Protein forms and topology | UniProt lists two isoforms, one chain spanning residues 1–693, no signal peptide, no propeptide and no transmembrane segment (UniProt Q9NYJ8). Without an antibody epitope in the supplied record, isoform coverage and the effect of epitope location cannot be predicted. |
| Antigen retrieval and detection | No TAB2-specific retrieval condition, dilution or fixation sensitivity is supplied (UniProt Q9NYJ8; HPA: tissue IHC). Retrieval, blocking and detection controls can be optimized as general paraffin IHC practice; their effects should be established for the actual antibody and tissue. |
| Situation | Likely cause | Next action |
|---|---|---|
| Expected lung macrophages or bone marrow hematopoietic cells show no convincing stain (HPA: High in these cells). | The staining run, antibody conditions or tissue preservation may be unsuitable (standard IHC practice); specimen variation remains possible despite an HPA High category (HPA: tissue IHC). | Confirm the positive cell population on the counterstain, inspect the run's positive control and review the antibody's IHC-P instructions. Optimize retrieval and detection using paired sections (standard IHC practice). |
| The whole section, including spaces between cells, appears brown. | Diffuse deposition or nonspecific background is more likely than the reported cellular cytoplasmic profile (HPA: tissue IHC; standard IHC practice). | Check the no-primary control and wash, blocking and chromogen steps; compare cellular signal with adjacent background before scoring (standard IHC practice). |
| Pigmented or blood-rich areas appear positive despite little matching cellular signal. | Endogenous pigment or detection activity can mimic chromogenic staining (standard IHC practice). HPA's TAB2 profile alone cannot identify the deposit (HPA: tissue IHC). | Compare a no-primary section, examine pigment in an unstained or counterstained section, and verify the detection system's endogenous-activity block (standard IHC practice). |
| Nuclei dominate the signal while cytoplasm is weak. | A nuclear-dominant result conflicts with TAB2's reported cytosolic and membrane-associated locations (UniProt Q9NYJ8); counterstain overlap or nonspecific staining is possible (standard IHC practice). | Inspect the no-primary control and cell boundaries, then compare a known HPA High cell population on the same run before accepting the compartment call (HPA: tissue IHC; standard IHC practice). |
| Strong staining appears only in an unexpected cell type. | Cross-reactivity or endogenous detection activity is possible (standard IHC practice), but wide expression means an unlisted positive cell is not excluded (UniProt Q9NYJ8; HPA: low tissue specificity). | Identify the cell type morphologically, check whether staining is cytoplasmic, and compare controls and a listed HPA High population before assigning TAB2 specificity (HPA: tissue IHC; standard IHC practice). |
| An IF/ICC image does not match the tissue IHC result. | The supplied HPA subcellular record has no main location or ICC-IF images, while the antibody entries list IHC approval without ICC status (HPA: subcellular; HPA: antibodies). | Treat IF/ICC as a separate validation question; assess its own controls and antibody documentation. Do not infer an IF protocol or validated IF compartment from the tissue IHC profile (HPA: tissue IHC; HPA: subcellular). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Approved — Medium consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Bone marrow | Hematopoietic cells | High | Protein (IHC) | HPA → |
| Bronchus | Respiratory epithelial cells | High | Protein (IHC) | HPA → |
| Endometrium | Glandular cells | High | Protein (IHC) | HPA → |
| Epididymis | Glandular cells | High | Protein (IHC) | HPA → |
| Lung | Macrophages | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| None in HPA: TAB2 is detected in all 45 scored tissues. Use a no-primary (secondary-only) and an isotype control instead. | ||||
Use the documented paraffin-section workflow as a starting point, then assess TAB2 staining by cell type, compartment and section quality.
Two human-reactive anti-TAB2 antibodies have IHC images from paraffin-embedded rectal cancer tissue and human brain tissue (catalog image captions; reactivity). Neither lists IF/ICC validation (catalog applications).
A02499-1 has an IHC image from a paraffin-embedded human rectal cancer section (A02499-1 image caption). A02499 lists human IHC-P and has an IHC image from human brain tissue (A02499 applications; image caption).
Which to pick: For paraffin-section IHC, choose A02499-1 when its documented retrieval and detection conditions are useful; its caption reports 2 μg/mL antibody after EDTA retrieval at pH 8.0 (A02499-1 image caption). A02499 is another human IHC-P option, shown in brain tissue at 5 μg/mL; its catalog calls it polyclonal, while A02499-1 has no clone specified (A02499 applications; image caption; dilution record; A02499-1 catalog clone field). Neither is a validated choice for IF/ICC or other species, and the fixative is unreported for both pictured tissues (catalog applications; reactivity; image captions).