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- Table of Contents
Use human placenta as a demonstrated paraffin-section specimen (datasheet A02802-1) and bronchial ciliated cells as a high-staining comparator (HPA tissue IHC). This guide covers chromogenic IHC setup and scoring of variable cytoplasmic staining (HPA tissue IHC), with interpretation informed by ADAMTS5 secretion into extracellular space and matrix (UniProt).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Cytoplasmic tissue staining (HPA tissue IHC); secreted into extracellular space and matrix (UniProt) | |
| Staining pattern | Variable cytoplasmic staining in several cell types (HPA tissue IHC) | |
| Antigen retrieval | EDTA pH 8.0 HIER, heat-mediated (datasheet A02802-1) | |
| Positive control | Bronchus+4 more · see all | |
| Negative control | Adipose tissue+4 more · see all |
| Fixation | Matched tissue-IHC evidence does not establish the fixation claim. Validate the specimen-specific method before use. (selected-SKU IHC image A02802-1) | |
| Caveat | Secreted protein: tissue staining may differ from RNA location (HPA tissue IHC) | |
| Regulation | Tissue-enhanced RNA: ovary, placenta (HPA tissue RNA) | |
| Isoform / epitope | No isoforms listed; mature chain starts at residue 262 (UniProt) |
The catalog antibody’s IHC-P protocol (datasheet: A02802-1) is accompanied by one published mouse knee cartilage IHC example (PMC12536589: Histological analyses).
| Sample | Paraffin-embedded human placenta tissue; fixative not specified (datasheet A02802-1) |
| Fixation | Image fixative and duration unreported (datasheet A02802-1); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: EDTA pH 8.0 (datasheet A02802-1); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A02802-1) |
| Primary antibody | Rabbit anti-ADAMTS5, 2-5μg/ml (datasheet A02802-1) |
| Primary incubation | Overnight at 4 °C (datasheet A02802-1) |
| Detection | Streptavidin-biotin complex (SABC), DAB chromogen (datasheet A02802-1) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | ADAMTS5-positive staining in ciliated cells (cilia axoneme) of bronchus (HPA tissue IHC: High). HPA tissue profile: Cytoplasmic expression at variable levels in several different cell types. No signal in the no-primary control. |
ADAMTS5 is a secreted extracellular matrix protein with no transmembrane segment (UniProt Q9UNA0 topology). In paraffin section IHC, expect variable cytoplasmic staining in several cell types, with strong staining reported in bronchial and fallopian tube ciliated cells (HPA: tissue IHC). Extracellular signal can fit its biology, but HPA rates tissue staining Approved and reports low consistency with RNA expression; interpret any compartment assignment cautiously (HPA: reliability; UniProt Q9UNA0 subcellular location).
| Strong signal in bronchial or fallopian tube ciliated cells, with adjacent cells less prominent (HPA: High in ciliated cells). | This matches an observed positive IHC pattern. Check cell identity and tissue structure before scoring: HPA specifies the cilia axoneme in these tissues, while its overall profile describes variable cytoplasmic staining. A positive field need not stain every cell equally (HPA: tissue IHC). |
| Signal is confined to nuclei, with no plausible cytoplasmic, ciliary or extracellular signal. | Treat an isolated nuclear pattern as suspect: HPA reports variable cytoplasmic staining, and UniProt places ADAMTS5 in the extracellular space and matrix (HPA: tissue IHC; UniProt Q9UNA0 subcellular location). Review morphology, counterstain and detection controls before assigning it to ADAMTS5 (general IHC practice). |
| Strong staining appears in cells listed as undetected, such as skin keratinocytes or adipocytes (HPA: Not detected in these cells). | Consider cross-reactivity or endogenous detection activity, then compare with a known positive section and reagent controls (general IHC practice). HPA's result applies to the specified cell type, not every cell in that tissue; unexpected staining alone cannot establish either mechanism (HPA: tissue IHC). |
| Color covers broad tissue areas, including spaces and cells, without a discernible pattern. | Diffuse signal may obscure a true extracellular target or reflect background (UniProt Q9UNA0 subcellular location; general IHC practice). Compare a section processed without primary antibody, inspect tissue edges and assess whether staining follows recognizable matrix or cell structures before calling it positive (general IHC practice). |
| No signal appears in bronchial or fallopian tube ciliated cells (HPA: High in these cells). | First check that the expected cells are present and intact. A blank known positive section points to an assay problem, but HPA's Approved rating and low RNA–protein consistency limit how strongly one section can define biological absence (HPA: reliability; general IHC practice). |
| Secreted protein and tissue interpretation (UniProt Q9UNA0 subcellular location) | Protein can occupy extracellular space or matrix, so its staining need not coincide with the cell that made it; HPA explicitly warns that tissue locations of RNA and protein may differ (HPA: reliability description). |
| Processing and antibody epitope (UniProt Q9UNA0 processing) | ADAMTS5 has a signal peptide at residues 1–16, a propeptide at 17–261 and a mature chain at 262–930. Which form a stain detects depends on the antibody epitope; its position is not supplied here (UniProt Q9UNA0 processing). |
| Strength of tissue evidence (HPA: antibody validation) | HPA lists HPA005661 and CAB025996 as IHC Approved, while reporting low consistency between staining and RNA. Approved should not be read as Enhanced or as proof that every observed cell signal is specific (HPA: antibodies; HPA: reliability). |
| What should IF/ICC show? (HPA: subcellular summary) | A secreted distribution is biologically plausible (HPA: Secreted; UniProt Q9UNA0 subcellular location). HPA provides no main ICC-IF location or cell-line images, so this record cannot define a verified punctate, membrane or nuclear IF pattern (HPA: ICC-IF record). |
| Negative reference cells (HPA: tissue IHC) | Adipocytes, skin keratinocytes and ovarian stromal cells are listed as Not detected. Use the named cells when comparing fields; the entries do not declare whole adipose tissue, skin or ovary ADAMTS5-free (HPA: tissue IHC). |
| Situation | Likely cause | Next action |
|---|---|---|
| The known positive section is blank. | The expected ciliated cells may be absent from the section, or a staining step may have failed (HPA: High in bronchus and fallopian tube ciliated cells; general IHC practice). | Confirm the cell population by morphology, then check primary antibody, detection reagents and counterstain on a suitable control section (general IHC practice). |
| The entire slide develops diffuse color. | Nonspecific reagent binding or incomplete control of chromogenic detection can obscure a spatial pattern (general IHC practice). | Inspect a no-primary control; review blocking, washes and detection exposure. Preserve the distinction between patterned matrix signal and structureless background (UniProt Q9UNA0 subcellular location; general IHC practice). |
| Only nuclei stain strongly. | A nuclear-only result conflicts with the reported cytoplasmic tissue profile and secreted location (HPA: tissue IHC; UniProt Q9UNA0 subcellular location). | Check counterstain and no-primary controls, then reassess whether a cytoplasmic or extracellular signal remains (general IHC practice). |
| Unexpected cells stain more strongly than the expected positive cells. | Cross-reactivity, endogenous detection activity or misidentified cells are possible (general IHC practice). HPA cell-level negatives are comparators, not absolute tissue exclusions (HPA: tissue IHC). | Verify cell identity, compare the known positive section and run the appropriate detection control before interpreting the unexpected population (general IHC practice). |
| Protein staining and tissue RNA levels seem discordant. | A secreted protein can be found away from its producer, and HPA reports low consistency between antibody staining and RNA expression (UniProt Q9UNA0 subcellular location; HPA: reliability). | Score the observed protein location and cell type separately from RNA abundance; describe the discrepancy without using RNA alone to reject staining (HPA: reliability description; general IHC practice). |
| An IF/ICC image shows a precise intracellular pattern that IHC cannot confirm. | HPA gives no main ICC-IF location or cell-line images for ADAMTS5 (HPA: ICC-IF record). | Treat the IF compartment assignment as unverified by these sources and assess it with appropriate IF controls in its separate guide (HPA: ICC-IF record; general IF practice). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Approved — Low consistency between antibody staining and RNA expression data. Secreted protein, tissue location of RNA and protein is expected to differ.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Bronchus | Ciliated cells (cilia axoneme) | High | Protein (IHC) | HPA → |
| Fallopian tube | Ciliated cells (cilia axoneme) | High | Protein (IHC) | HPA → |
| Nasopharynx | Ciliated cells (cell body) | High | Protein (IHC) | HPA → |
| Cervix | Glandular cells | Medium | Protein (IHC) | HPA → |
| Colon | Glandular cells | Medium | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | Not detected | Protein (IHC) | HPA → |
| Liver | Cholangiocytes | Not detected | Protein (IHC) | HPA → |
| Oral mucosa | Squamous epithelial cells | Not detected | Protein (IHC) | HPA → |
| Ovary | Ovarian stroma cells | Not detected | Protein (IHC) | HPA → |
Troubleshooting ADAMTS5 staining in paraffin-section chromogenic IHC, with one IF/ICC application note.
A02802-1 has a human paraffin-section IHC image (A02802-1 image caption); M02802 lists IF/ICC applications (catalog: M02802 applications). Both list Human, Mouse and Rat reactivity (catalog: reactivity).
A02802-1 lists IHC and Human, Mouse and Rat reactivity, with an IHC image from human paraffin-embedded placenta (catalog: A02802-1 applications/reactivity; A02802-1 image caption). M02802 lists IHC and IF/ICC applications and Human, Mouse and Rat reactivity; no IHC or IF image is supplied (catalog: M02802 applications/reactivity/image alts).
Which to pick: For tissue IHC, choose A02802-1 for its documented human paraffin-section workflow, including EDTA retrieval at pH 8.0 and DAB detection; the fixative is unreported (A02802-1 image caption). For IF/ICC, M02802 is the listed option and is monoclonal clone 33A47, although no IF image is supplied (catalog: M02802 applications/clone/image alts). Both list Human, Mouse and Rat reactivity, but only A02802-1 has a tissue IHC image, and that image shows human tissue (catalog: reactivity/image alts; A02802-1 image caption).