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- Table of Contents
Plan chromogenic ARG1 IHC in paraffin sections using liver hepatocytes and bone marrow hematopoietic cells as positive references (HPA tissue IHC). This guide covers cytosolic pattern expectations (UniProt), fixation consistency (standard IHC practice), and cell identity when interpreting staining.
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Cytosol; azurophil granules in neutrophils (UniProt) | |
| Staining pattern | Strong hepatocyte and marrow-cell staining; cytosol expected (HPA tissue IHC; UniProt) | |
| Antigen retrieval | EDTA pH 8.0 HIER, heat-mediated (datasheet A01106) | |
| Positive control | Bone marrow+3 more · see all | |
| Negative control | Adipose tissue+4 more · see all |
| Fixation | Keep fixation conditions consistent across sections. (standard IHC practice; not target-specific) | |
| Caveat | Granulocytes also express ARG1; verify immune-cell identity (UniProt) | |
| Regulation | ILC2 expression during lung disease (UniProt) | |
| Isoform / epitope | 3 isoforms; antibody epitope coverage is unspecified (UniProt) |
The catalog antibody protocol uses heat mediated EDTA retrieval at pH 8.0 (datasheet: A01106). The published IHC protocols below describe paraffin sections (PMC11648120; PMC10371158).
| Sample | Paraffin-embedded human liver cancer tissue; fixative not specified (datasheet A01106) |
| Fixation | Image fixative and duration unreported (datasheet A01106); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: EDTA pH 8.0 (datasheet A01106); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A01106) |
| Primary antibody | Rabbit anti-ARG1, 2-5 μg/ml (datasheet A01106) |
| Primary incubation | Overnight at 4 °C (datasheet A01106) |
| Detection | Streptavidin-biotin complex (SABC), DAB chromogen (datasheet A01106) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | ARG1-positive staining in hematopoietic cells of bone marrow (HPA tissue IHC: High). HPA tissue profile: Selective expression in liver and subsets of bone marrow cells. No signal in the no-primary control. |
ARG1 is a cytosolic protein without a transmembrane segment (UniProt P05089 topology). In paraffin-section IHC, expect strong staining in hepatocytes and subsets of bone-marrow hematopoietic cells (HPA: High in both). HPA describes the tissue pattern as selective for liver and subsets of bone marrow cells, with Enhanced IHC reliability based on consistency between antibody staining and RNA expression (HPA: tissue IHC).
| Strong hepatocyte cytoplasmic staining. | This fits a positive result: hepatocytes stain at a High level (HPA: liver). Assess the distribution across cells and the counterstained tissue architecture (general IHC practice). |
| Strong signal in a subset of bone-marrow hematopoietic cells; occasional granular signal in neutrophils. | HPA reports High staining in bone-marrow hematopoietic cells, without assigning every stained cell a lineage (HPA: bone marrow). ARG1 can localize to neutrophil azurophil granules (UniProt P05089); identify cells by morphology before calling a granular signal specific (general IHC practice). |
| Predominantly nuclear or sharply membrane-bound staining. | That distribution conflicts with the reported cytosolic localization and absence of a transmembrane segment (UniProt P05089 topology). Check morphology and controls before interpreting it as ARG1 (general IHC practice). |
| Prominent signal in cells expected to be negative, or color spread across unrelated structures. | Adipocytes and bronchial respiratory epithelial cells are Not detected in HPA tissue IHC (HPA: adipose tissue; bronchus). In those cells, assess antibody specificity and detection-system background, including endogenous activity where relevant (general IHC practice). |
| Diffuse slide-wide color, or no signal in the liver positive control. | Diffuse color obscures cell-specific scoring; assess blocking, washes and chromogen development (general IHC practice). An unstained liver control conflicts with High hepatocyte staining (HPA: liver); check the IHC run before interpreting a test section as negative (general IHC practice). |
| Cell and tissue context | HPA reports High staining in liver hepatocytes and bone-marrow hematopoietic cells, Medium staining in splenic red-pulp cells and testis preleptotene spermatocytes, and low staining in skin keratinocytes (HPA: tissue IHC). Apply the expected level to the identified cell population, not every cell in the section. |
| Subcellular distribution | Cytosolic ARG1 and neutrophil azurophil-granule localization support cytoplasmic and, in neutrophils, granular interpretation (UniProt P05089). The record gives no transmembrane segment or signal peptide (UniProt P05089 topology and processing). |
| Antibody validation | Five listed antibodies have Enhanced IHC status (HPA: HPA003595, HPA024006, CAB009434, CAB056159, CAB080011). That supports the reported tissue pattern; it does not establish specificity for an unlisted antibody or an unexpected compartment (HPA: antibody validation). |
| Isoforms and processing | Three isoforms are listed, and the annotated chain spans residues 1–322 without a propeptide (UniProt P05089). The supplied evidence does not map antibody epitopes to isoforms, so isoform-specific staining cannot be inferred. |
| Retrieval and fixation | No ARG1-specific retrieval condition or fixation sensitivity is established by these sources (UniProt P05089; HPA: tissue IHC). If optimizing a paraffin IHC run, compare retrieval conditions with a positive control as general IHC practice; do not assign an ARG1-specific fixation effect. |
| IF/ICC applicability | Can IF/ICC confirm this pattern? UniProt reports cytosolic localization, but HPA supplies no main ICC-IF location or cell-line images (UniProt P05089; HPA: subcellular). Treat this as an IHC interpretation guide, not an IF/ICC protocol or independent imaging validation. |
| Situation | Likely cause | Next action |
|---|---|---|
| Liver control has little or no hepatocyte signal. | The result conflicts with High hepatocyte staining (HPA: liver); the failed control alone cannot identify the failed IHC step (general IHC practice). | Check tissue preservation, primary-antibody application, retrieval, detection and chromogen with a parallel control (general IHC practice). Report test-section negatives only after the positive control works. |
| Bone-marrow signal seems absent. | HPA describes selective expression in subsets of bone-marrow cells, although hematopoietic-cell staining is High (HPA: bone marrow). A field without the relevant cells can appear negative. | Review additional fields and cell morphology alongside the liver positive control (HPA: liver; general IHC practice). Avoid assigning ARG1 status to all marrow cells from one field. |
| Nuclei or cell borders dominate the staining. | A predominantly nuclear or membrane-bound pattern is discordant with cytosolic ARG1 and its lack of a transmembrane segment (UniProt P05089 topology). | Compare a negative reagent control and a known-positive tissue; review counterstain and section morphology before scoring the compartment (general IHC practice). |
| Adipocytes or bronchial epithelial cells stain strongly. | These cell populations are Not detected in HPA tissue IHC (HPA: adipose tissue; bronchus). Unexpected color may reflect cross-reactivity or detection-system activity; the image alone cannot distinguish them. | Use appropriate negative controls and check blocking and detection reagents for the chosen chromogenic system (general IHC practice). Reassess cell identity before calling an unexpected positive. |
| Color is diffuse or obscures cell boundaries. | Diffuse background prevents confident cell-level interpretation (general IHC practice); HPA's selective tissue pattern does not support calling uniform slide-wide color specific (HPA: tissue IHC). | Review reagent-only controls, washing, blocking and chromogen development, then compare the repeat section with expected hepatocyte staining (general IHC practice; HPA: liver). |
| Granular staining appears in a suspected neutrophil. | Neutrophil azurophil granules are a reported ARG1 location (UniProt P05089); granular signal alone does not prove the cell's identity or establish antibody specificity (general IHC practice). | Confirm morphology and compare controls and surrounding cells before scoring it; preserve the cytoplasmic hepatocyte pattern as the IHC reference (general IHC practice; HPA: liver). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Enhanced — High consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Bone marrow | Hematopoietic cells | High | Protein (IHC) | HPA → |
| Liver | Hepatocytes | High | Protein (IHC) | HPA → |
| Spleen | Cells in red pulp | Medium | Protein (IHC) | HPA → |
| Testis | Preleptotene spermatocytes | Medium | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Adrenal gland | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Appendix | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Breast | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Bronchus | Respiratory epithelial cells | Not detected | Protein (IHC) | HPA → |
Troubleshoot ARG1 staining in paraffin sections by checking retrieval, cellular localisation, controls and scoring before interpreting chromogenic signal.
These anti-ARG1 antibodies have IHC images from human, mouse, and rat tissues (IHC captions: A01106, M01106-5, M01106-2); two also list IF applications (catalog: M01106-5, M01106-2).
A01106 shows paraffin-section IHC in human liver cancer and mouse and rat liver (IHC captions: A01106). M01106-5 shows IHC in human hepatocellular carcinoma and human, mouse, and rat liver, while M01106-2 shows paraffin-section IHC in human liver (IHC captions: M01106-5, M01106-2).
Which to pick: For paraffin-section IHC, A01106 has a documented EDTA pH 8.0 retrieval and DAB workflow at 2 μg/ml (IHC caption: A01106); M01106-2 is a human-reactive monoclonal with a paraffin-section image, but its fixative is unreported (catalog: M01106-2 reactivity and clonality; IHC caption: M01106-2). For IF/ICC, M01106-2 lists both applications, while M01106-5 lists IF only; neither has an IF image in the payload (catalog: applications and IF image alts). For cross-species tissue IHC, A01106 has human, mouse, and rat paraffin-section images and lists monkey reactivity; M01106-5 has human, mouse, and rat IHC images and is monoclonal (IHC captions: A01106, M01106-5; catalog: reactivity and clonality).