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- Table of Contents
Plan chromogenic CALB2 IHC in paraffin sections using the IHC-validated antibody (datasheet A04255). The guide uses cytoplasmic tissue staining and documented positive cell populations to help select controls and interpret results (HPA tissue IHC).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Cytoplasmic staining in tissue IHC (HPA tissue IHC) | |
| Staining pattern | Cytoplasmic staining in brain, adipose tissue and Leydig cells (HPA tissue IHC) | |
| Antigen retrieval | EDTA pH 8.0 HIER, heat-mediated (datasheet A04255) | |
| Positive control | Adrenal gland+4 more · see all | |
| Negative control | Appendix+4 more · see all |
| Fixation | Keep fixation consistent across sections. (standard IHC practice; not target-specific) | |
| Caveat | Brain staining varies by region and cell type (HPA tissue IHC) | |
| Regulation | RNA is tissue enhanced in adipose tissue and brain (HPA tissue RNA) | |
| Isoform / epitope | No annotated isoforms; one 1–271 chain (UniProt) |
The catalog antibody protocol uses EDTA pH 8.0 heat retrieval (datasheet A04255). One published IHC protocol stains Japanese flounder testis and ovary (PMC7552167).
| Sample | Paraffin-embedded human rectal cancer tissue; fixative not specified (datasheet A04255) |
| Fixation | Image fixative and duration unreported (datasheet A04255); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: EDTA pH 8.0 (datasheet A04255); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A04255) |
| Primary antibody | Rabbit anti-CALB2, 0.5-1μg/ml (datasheet A04255) |
| Primary incubation | Overnight at 4 °C (datasheet A04255) |
| Detection | Streptavidin-biotin complex (SABC), DAB chromogen (datasheet A04255) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | CALB2-positive staining in glandular cells of adrenal gland (HPA tissue IHC: High). HPA tissue profile: Cytoplasmic expression in several tissues and cells, including brain, adipose tissue, fallopian tube, retina, endocrine pancreas and Leydig cells. No signal in the no-primary control. |
CALB2 should appear chiefly as cytoplasmic staining in selected cells, including cortical and caudate neurons, cerebellar GLUC cells, and testicular Leydig cells (HPA: tissue IHC, Enhanced). Staining may extend into neuronal projections (HPA: hypothalamus, High; UniProt P22676: dendrites and synapse). CALB2 has no transmembrane segment (UniProt P22676: topology). Assess the stained cell type as well as its compartment.
| Distinct cytoplasmic staining in selected cortical or caudate neurons, with surrounding cells less stained. | This fits the reported high neuronal staining in those regions (HPA: cerebral cortex and caudate, High). Score the identified cells and their cytoplasm; a uniformly stained field would need a separate explanation. |
| Staining follows neuronal projections as well as cell bodies. | Projection staining can fit the expected pattern (HPA: hypothalamic neuronal projections, High; UniProt P22676: dendrites and synapse). Check that the signal tracks recognizable structures rather than coating the whole section. |
| Prominent nuclear staining with little cytoplasmic signal. | Question the compartment assignment: HPA describes tissue expression as cytoplasmic, and UniProt places CALB2 at dendrites and synapses (HPA: tissue IHC profile; UniProt P22676: subcellular location). Review counterstain and controls before scoring nuclei as positive. |
| Strong staining in appendix glandular cells or heart cardiomyocytes. | These cells are reported as not detected (HPA: appendix glandular cells and heart cardiomyocytes). Unexpected staining warrants checks for antibody cross-reactivity, endogenous detection activity, and whether the apparent signal belongs to another cell type. |
| Diffuse colour across cells and tissue spaces, or no signal in a known-positive region. | Diffuse colour lacks the cell-restricted pattern reported for CALB2 (HPA: tissue IHC profile). A blank positive control conflicts with reported high staining (HPA: cerebral cortex neurons, High); check the staining run before interpreting the study section. |
| Compartment and tissue context | Expect cytoplasmic signal in selected cells (HPA: tissue IHC profile). Projection staining has specific support in hypothalamus (HPA: neuronal projections, High); do not require every positive tissue to show the same structure. |
| Choice of comparison cells | Cortical neurons and Leydig cells are reported High, while appendix glandular cells are not detected (HPA: tissue IHC). Compare the specified cells within each section; a tissue label alone does not define every cell as positive. |
| Antibody evidence | HPA grades tissue staining Enhanced and lists HPA007305, HPA007306, and CAB000106 as IHC Enhanced (HPA: tissue IHC reliability; HPA: antibody validation). This supports pattern comparison but does not validate an unlisted antibody. |
| Retrieval and epitope information | No CALB2-specific retrieval condition, epitope location, or fixation sensitivity is supplied (UniProt P22676 and HPA: supplied records). Treat retrieval changes as general IHC optimization; judge them against positive and negative cell controls. |
| IF/ICC interpretation | For IF/ICC, is cytosolic signal plausible? Yes: HPA reports supported cytosolic localization (HPA: subcellular ICC-IF). That observation can inform compartment interpretation here, but it supplies no IHC retrieval or detection settings. |
| Situation | Likely cause | Next action |
|---|---|---|
| Known-positive cortical neurons are blank. | The result conflicts with reported High staining (HPA: cerebral cortex neuronal cells); the supplied sources do not identify a CALB2-specific fixation cause. | Confirm that the expected cells are present, then check the IHC run's positive control, primary antibody step, retrieval record, and detection reagents as general workflow checks. |
| Colour appears mainly over nuclei. | The compartment differs from the reported cytoplasmic tissue pattern and supported ICC-IF cytosol (HPA: tissue IHC profile; HPA: subcellular ICC-IF). | Compare the stain with the counterstain and a reagent control; score only signal whose compartment and cell identity can be resolved. |
| Appendix glands stain strongly. | That cell type is reported as not detected (HPA: appendix glandular cells); cross-reactivity or endogenous detection activity are possibilities, not established causes. | Inspect a control omitting primary antibody to assess detection background, then compare the cell-specific pattern with a known-positive section. |
| The entire section has a diffuse brown haze. | The haze obscures the selective cytoplasmic pattern (HPA: tissue IHC profile); nonspecific reagent binding or detection background may contribute. | Use a reagent control, review blocking and washing, and adjust antibody concentration only against a positive control; these are general IHC checks. |
| A testis section appears negative despite a working neuronal control. | The reported high testis signal belongs specifically to Leydig cells (HPA: testis Leydig cells, High), so the chosen field or cell identification may matter. | Locate and assess Leydig cells before calling the tissue negative; compare their signal with nearby cells and the control section. |
| An IF/ICC image looks more diffuse than the IHC section. | HPA supports cytosolic ICC-IF localization, while tissue IHC describes cytoplasmic expression in selected cells (HPA: subcellular ICC-IF; HPA: tissue IHC profile). | Compare cell identity and cytosolic localization; use the separate IF/ICC guide for its workflow rather than transferring IF settings to IHC. |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Enhanced — High consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adrenal gland | Glandular cells | High | Protein (IHC) | HPA → |
| Caudate | Neuronal cells | High | Protein (IHC) | HPA → |
| Cerebellum | GLUC cells - cytoplasm/membrane | High | Protein (IHC) | HPA → |
| Cerebral cortex | Neuronal cells | High | Protein (IHC) | HPA → |
| Hippocampus | Glial cells | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Appendix | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | Not detected | Protein (IHC) | HPA → |
| Bronchus | Basal cells | Not detected | Protein (IHC) | HPA → |
| Cervix | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Duodenum | Glandular cells | Not detected | Protein (IHC) | HPA → |
Troubleshoot CALB2 staining in paraffin sections by checking retrieval, cell type, intracellular pattern, and controls before comparing chromogenic signal across samples.
CALB2 IHC images show paraffin sections of human rectal cancer and brain, plus mouse and rat brain (A04255/PA1015 image captions); IF is shown in mouse brain (PA1015 IF caption).
A04255 and PA1015 each have IHC images from human rectal cancer and mouse and rat brain paraffin sections; A04255 also has a human brain IHC image, while PA1015 has a mouse brain IF image (A04255/PA1015 image captions). PB9248 has IHC images labeled mouse brain, rat brain, and human intestinal cancer (PB9248 image captions).
Which to pick: For tissue IHC, start with PA1015: its paraffin section caption documents EDTA retrieval at pH 8.0 and 1 μg/ml primary antibody (PA1015 IHC caption); the fixative is unreported (PA1015 IHC caption). For IF, PA1015 has a mouse brain image; for ICC, A04255 lists that application, but its supplied IF caption identifies a different SKU, so that image does not verify A04255 (PA1015 IF caption; A04255 applications and IF caption). For cross-species tissue IHC, A04255 has paraffin section images from human, mouse, and rat samples, with fixatives unreported (A04255 IHC captions).