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- Table of Contents
Plan DSG2 staining in paraffin sections using breast glandular cells as a positive reference (HPA tissue IHC). Compare membrane and cytoplasmic staining (HPA tissue IHC), keeping apoptosis-associated cleavage in mind when interpreting cytoplasmic signal (UniProt).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Cytoplasmic and membranous tissue staining (HPA tissue IHC) | |
| Staining pattern | Most cells outside lymphoid tissue and CNS: membrane and cytoplasm (HPA tissue IHC) | |
| Antigen retrieval | EDTA pH 8.0 HIER, heat-mediated (datasheet M02035-2) | |
| Positive control | Appendix+4 more · see all | |
| Negative control | Adipose tissue+4 more · see all |
| Fixation | Keep fixation consistent across sections (standard IHC practice; not target-specific); Matched tissue-IHC evidence does not establish the fixation claim. Validate the specimen-specific method before use. (selected-SKU IHC image M02035-2) | |
| Caveat | Apoptotic cleavage can shift DSG2 into the cytoplasm (UniProt) | |
| Regulation | Expression falls during stem-cell differentiation (UniProt) | |
| Isoform / epitope | 0 isoforms; cleavage makes extracellular vs cytoplasmic epitopes relevant (UniProt) |
The catalog antibody’s IHC-P protocol (datasheet: M02035-2) is accompanied by two published paraffin-section DSG2 IHC methods (PMC7789404; PMC7436288).
| Sample | Paraffin-embedded human breast cancer tissue; fixative not specified (datasheet M02035-2) |
| Fixation | Image fixative and duration unreported (datasheet M02035-2); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: EDTA pH 8.0 (datasheet M02035-2); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet M02035-2) |
| Primary antibody | Mouse monoclonal (clone 2B4D1) anti-DSG2, 2-5 µg/ml (datasheet M02035-2) |
| Primary incubation | Overnight at 4 °C (datasheet M02035-2) |
| Detection | HRP-conjugated secondary, DAB chromogen (datasheet M02035-2) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | DSG2-positive staining in endocrine cells of appendix (HPA tissue IHC: High). HPA tissue profile: Cytoplasmic and membranous expression in essentially all cells except in lymphoid tissue and the CNS. No signal in the no-primary control. |
DSG2 is a single-pass membrane protein concentrated at desmosomal cell junctions (UniProt Q14126 topology and subcellular location). In paraffin-section IHC, expect membranous staining with some cytoplasmic staining in many cell types; HPA reports high staining in breast glandular cells and bronchial respiratory epithelial cells (HPA: tissue IHC, Enhanced reliability). Judge the signal against the cell type and its neighbours, since intensity varies by tissue (HPA: tissue IHC).
| Cell borders stain in breast glandular or bronchial respiratory epithelial cells. | This fits DSG2 at cell junctions (UniProt Q14126 subcellular location); both populations show high IHC staining (HPA: High). Assess whether the signal follows adjoining cell borders, rather than relying on brown colour alone (general IHC practice). |
| Staining is confined to nuclei, with no convincing cell-border signal. | A purely nuclear pattern is outside the reported DSG2 locations (UniProt Q14126 subcellular location; HPA: cell junctions, plasma membrane and vesicles). Treat it as suspect and review the counterstain and detection controls (general IHC practice). |
| Strong signal appears in lymph-node germinal-center cells or adipocytes. | Those specific cell populations were not detected by HPA IHC (HPA: lymph node and adipose tissue). Check cell identification and consider antibody cross-reactivity or endogenous detection activity; one unexpected cell alone cannot distinguish the causes (general IHC practice). |
| Diffuse colour covers cells and surrounding section, obscuring borders. | Broad background prevents a reliable localization call (general IHC practice). Some cytoplasmic DSG2 staining is reported (HPA: tissue IHC), so assess whether signal stays within identified cells before dismissing all cytoplasmic colour. |
| A known-positive breast or bronchus section shows no specific staining. | HPA reports high staining in breast glandular and bronchial respiratory epithelial cells (HPA: High). First confirm that those cells are present; then check the IHC run, antibody dilution, retrieval and detection controls (general IHC practice). |
| Membrane orientation and epitope location | DSG2 has an extracellular region at residues 50–609, one transmembrane segment at 610–634, and a cytoplasmic region at 635–1118 (UniProt Q14126 topology). The supplied record does not locate either antibody's epitope, so it cannot predict which domain a particular stain detects. |
| Cleavage and intracellular signal | DSG2 can move to the cytoplasm after CASP3 cleavage during apoptosis (UniProt Q14126 subcellular location). HPA also reports cytoplasmic tissue staining (HPA: tissue IHC); cytoplasmic colour by itself therefore does not prove either cleavage or an artefact. |
| Glycosylation and localization | Glycosylation promotes DSG2 localization to the plasma membrane (UniProt Q14126 subcellular location). This supports checking membrane distribution, but the supplied evidence does not show how glycosylation affects IHC staining intensity or antigen retrieval. |
| Antibody validation | The 2 listed antibodies, HPA004896 and CAB025122, have Enhanced IHC validation (HPA: antibody validation). That status supports the reported tissue pattern; it does not establish that every brown signal in a new section is specific. |
| Antigen retrieval | Use the validated IHC-P conditions available for the catalog antibody and record any changes (general IHC practice). Neither HPA tissue staining nor UniProt topology establishes a DSG2-specific retrieval requirement or fixation sensitivity. |
| IF/ICC Q&A: Where should DSG2 appear? | Mainly at cell junctions, with additional plasma-membrane and vesicular localization in ICC-IF images (HPA: supported cell junctions and plasma membrane; approved vesicles). This localization answer is for interpretation; IF/ICC preparation belongs in its own guide. |
| Situation | Likely cause | Next action |
|---|---|---|
| No stain in the expected positive cells. | The chosen section may lack the relevant cells, or the IHC run may have failed (general IHC practice). | Confirm breast glandular or bronchial respiratory epithelial cells are present (HPA: High); review the antibody's validated IHC-P conditions and a run control (general IHC practice). |
| Brown signal appears mainly in germinal-center cells or adipocytes. | The result conflicts with HPA's not-detected calls for those cells (HPA: lymph node and adipose tissue); cross-reactivity or detection activity is possible (general IHC practice). | Recheck cell identity and compare an appropriate negative detection control with the stained section (general IHC practice). |
| Nuclei dominate while cell borders are blank. | This differs from DSG2's reported junctional localization (UniProt Q14126 subcellular location; HPA: cell junctions). | Verify the counterstain and inspect a known-positive epithelial area for cell-border signal (general IHC practice; HPA: breast glandular cells High). |
| Diffuse chromogen obscures tissue detail. | Excess nonspecific staining or endogenous detection activity can mask the cellular pattern (general IHC practice). | Review blocking, antibody dilution, washing and detection controls under the chosen IHC method (general IHC practice); do not score indistinct colour as DSG2 localization. |
| Only cytoplasmic staining remains in an otherwise interpretable section. | Cytoplasmic DSG2 is reported in tissue IHC, and CASP3 cleavage can produce cytoplasmic localization during apoptosis (HPA: tissue IHC; UniProt Q14126 subcellular location). | Compare cell-associated colour with neighbouring cell borders and controls; avoid assigning a cleavage mechanism from staining alone (general IHC practice). |
| The result differs from an ICC-IF image. | HPA describes junctions, plasma membrane and vesicles in ICC-IF, while tissue IHC also reports cytoplasmic staining (HPA: subcellular and tissue IHC). | Compare localization within the same assay and cell type before interpreting a difference; score paraffin-section IHC against its tissue controls (general IHC practice). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Enhanced — High consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Appendix | Endocrine cells | High | Protein (IHC) | HPA → |
| Breast | Glandular cells | High | Protein (IHC) | HPA → |
| Bronchus | Respiratory epithelial cells | High | Protein (IHC) | HPA → |
| Cervix | Glandular cells | High | Protein (IHC) | HPA → |
| Colon | Endocrine cells | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Caudate | Glial cells | Not detected | Protein (IHC) | HPA → |
| Cerebellum | Cells in granular layer | Not detected | Protein (IHC) | HPA → |
| Cerebral cortex | Endothelial cells | Not detected | Protein (IHC) | HPA → |
| Hippocampus | Glial cells | Not detected | Protein (IHC) | HPA → |
Troubleshoot DSG2 staining in paraffin sections by checking retrieval, junctional localisation, cell identity and detection controls before comparing samples.
Anti-DSG2 antibodies have IHC images from human paraffin sections (catalog IHC image captions). A02035 and PA1559 also have MCF-7 IF images (catalog IF image captions); PA1559 has rat intestine IHC data (PA1559 IHC image caption).
M02035-2 was shown on human breast cancer paraffin sections (M02035-2 IHC image caption); A02035 was shown on human appendicitis paraffin sections and MCF-7 cells by IF/ICC (A02035 image captions). PA1559 was shown on human breast carcinoma and rat intestine paraffin sections by IHC, and on MCF-7 cells by IF/ICC (PA1559 image captions).
Which to pick: For human tissue IHC, choose the mouse monoclonal M02035-2, shown on breast cancer paraffin sections; its fixative is unreported (M02035-2 catalog clone and IHC image caption). For IF/ICC, choose A02035, a rabbit antibody with MCF-7 IF/ICC data (A02035 catalog applications and IF image caption). For cross-species IHC, consider PA1559: it is listed as reactive with human, mouse and rat, while its paraffin IHC images document human and rat tissue; the fixative is unreported (PA1559 catalog reactivity and IHC image captions).