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- Table of Contents
Plan DSG2 chromogenic IHC on paraffin sections using 2–5 µg/ml catalog antibody (datasheet: M02035-2). Compare breast glandular cells with lymph node germinal center cells, then score cytoplasmic and membranous staining (HPA tissue IHC).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Membranous and cytoplasmic tissue staining (HPA tissue IHC) | |
| Staining pattern | Most cells show cytoplasmic and membranous staining (HPA tissue IHC) | |
| Antigen retrieval | EDTA pH 8.0 HIER, heat-mediated (datasheet M02035-2) | |
| Positive control | Appendix+4 more · see all | |
| Negative control | Adipose tissue+4 more · see all |
| Fixation | Keep fixation consistent across sections. (standard IHC practice; not target-specific) | |
| Caveat | Apoptotic cleavage can shift DSG2 into cytoplasm (UniProt) | |
| Regulation | Expression declines with stem-cell differentiation (UniProt) | |
| Isoform / epitope | 0 isoforms listed; processing and epitope side matter (UniProt) |
The catalog antibody has an IHC-P protocol (datasheet M02035-2). Published protocols cover colon tissue microarrays (PMC7789404: methods) and biliary tissues (PMC7436288: methods).
| Sample | Paraffin-embedded human breast cancer tissue; fixative not specified (datasheet M02035-2) |
| Fixation | Image fixative and duration unreported (datasheet M02035-2); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: EDTA pH 8.0 (datasheet M02035-2); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet M02035-2) |
| Primary antibody | Mouse monoclonal (clone 2B4D1) anti-DSG2, 2-5 µg/ml (datasheet M02035-2) |
| Primary incubation | Overnight at 4 °C (datasheet M02035-2) |
| Detection | HRP-conjugated secondary, DAB chromogen (datasheet M02035-2) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | DSG2-positive staining in endocrine cells of appendix (HPA tissue IHC: High). HPA tissue profile: Cytoplasmic and membranous expression in essentially all cells except in lymphoid tissue and the CNS. No signal in the no-primary control. |
DSG2 is a desmosomal cell-junction protein with extracellular and cytoplasmic regions flanking one transmembrane segment (UniProt Q14126 topology). Expect membranous, often junctional staining, with possible cytoplasmic signal (HPA tissue IHC; HPA subcellular ICC-IF). HPA reports high staining in several endocrine, glandular, and respiratory epithelial cell populations, and rates its tissue IHC profile Enhanced for consistency with RNA expression (HPA tissue IHC).
| Strong cell-border staining in breast glandular cells or bronchial respiratory epithelial cells, with some cytoplasmic signal (HPA tissue IHC: High). | This fits DSG2 at desmosomal junctions and the broader membranous and cytoplasmic tissue profile (UniProt Q14126 subcellular; HPA tissue IHC). Score the named cell population and compartment, since adjacent cells need not share its staining level (HPA tissue IHC). |
| Predominantly nuclear staining, without a convincing cell-border component. | Nuclear-only staining is outside the reported DSG2 locations and warrants suspicion of artefact (UniProt Q14126 subcellular; HPA subcellular ICC-IF). Cytoplasmic staining alone needs context: UniProt reports cytoplasmic relocation after CASP3 cleavage during apoptosis (UniProt Q14126 subcellular). |
| Strong staining in adipocytes or lymph-node germinal center cells, with little signal in expected positive cells. | Those populations are reported as Not detected (HPA tissue IHC). Check for antibody cross-reactivity or endogenous chromogenic activity (general IHC practice); do not infer which caused the signal from its location alone. |
| Uniform colour across cells and empty spaces, obscuring cell borders. | A diffuse field is hard to reconcile with the reported junctional location (UniProt Q14126 subcellular; HPA subcellular ICC-IF). Background from detection or blocking is a possibility; a no-primary control helps test that possibility (general IHC practice). |
| No staining in breast glandular or bronchial respiratory epithelial cells. | Both are High in the HPA tissue IHC record, so an all-negative slide warrants a technical check (HPA tissue IHC). First confirm the relevant cells are present, then review antibody suitability, retrieval, detection, and controls (general IHC practice). |
| Membrane topology | DSG2 spans residues 610–634, with residues 50–609 extracellular and 635–1118 cytoplasmic (UniProt Q14126 topology). Interpret border staining against this architecture; the supplied record gives no epitope for the catalog antibody, so it cannot predict which side that antibody detects. |
| Processing and redistribution | The signal peptide and propeptide precede the mature chain, and cytoplasmic relocation is reported after CASP3 cleavage in apoptosis (UniProt Q14126 processing; UniProt Q14126 subcellular). Thus, cytoplasmic signal is possible, but its presence on a slide does not by itself establish cleavage. |
| Glycosylation and localisation | UniProt lists five glycosylation sites and reports that glycosylation promotes plasma-membrane localisation (UniProt Q14126 glycosylation; UniProt Q14126 subcellular). These facts do not establish an IHC retrieval requirement or predict staining intensity for this antibody. |
| Tissue and cell selection | HPA calls endocrine cells in appendix, colon, and duodenum High, while adipocytes and lymph-node germinal center cells are Not detected (HPA tissue IHC). Use the specified cell populations for comparison; a tissue name alone does not define every cell as positive or negative. |
| Evidence by application | HPA rates tissue IHC reliability Enhanced and lists HPA004896 and CAB025122 as IHC Enhanced; each is ICC Supported (HPA tissue IHC; HPA antibodies). Those ratings support the reported patterns, but do not supply an IHC-P dilution or retrieval condition for an unspecified catalog antibody. |
| Situation | Likely cause | Next action |
|---|---|---|
| Expected positive cells are blank. | The result conflicts with HPA High staining in breast glandular or bronchial respiratory epithelial cells (HPA tissue IHC); the cause remains undetermined. | Verify cell identity and section quality, then inspect the catalog antibody's IHC-P instructions, retrieval, reagent activity, and a known-positive control (general IHC practice). |
| Borders are faint but the whole section is coloured. | Diffuse background can hide junctional signal expected from DSG2 localisation (UniProt Q14126 subcellular). | Compare a no-primary control; check blocking, washing, and chromogen development before changing the staining conditions (general IHC practice). |
| A nominal negative population stains strongly. | Adipocytes or lymph-node germinal center cells are Not detected in HPA tissue IHC; cross-reactivity or endogenous detection activity are possible (HPA tissue IHC; general IHC practice). | Inspect a no-primary control and the positive population on the same run; if using peroxidase detection, review the endogenous-enzyme control (general IHC practice). |
| Colour is mainly nuclear. | The reported DSG2 locations are junctional, membranous, and sometimes cytoplasmic, rather than nuclear (UniProt Q14126 subcellular; HPA subcellular ICC-IF). | Check the counterstain and no-primary control, then compare a known-positive cell-border pattern before scoring nuclei as specific (general IHC practice). |
| Cytoplasmic colour appears without crisp borders. | HPA reports cytoplasmic as well as membranous tissue expression; UniProt also reports cytoplasmic relocation after apoptotic CASP3 cleavage (HPA tissue IHC; UniProt Q14126 subcellular). | Review cell morphology and a matched positive control; record cytoplasmic and border staining separately without assigning a cleavage mechanism from IHC alone (general IHC practice). |
| Q: What should an IF/ICC image show? | A: HPA reports cell junctions as the main location, with plasma membrane and vesicles also observed (HPA subcellular ICC-IF). | Compare the image with those locations and assess cell identity; consult the separate IF/ICC guide for experimental conditions (HPA subcellular ICC-IF). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Enhanced — High consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Appendix | Endocrine cells | High | Protein (IHC) | HPA → |
| Breast | Glandular cells | High | Protein (IHC) | HPA → |
| Bronchus | Respiratory epithelial cells | High | Protein (IHC) | HPA → |
| Cervix | Glandular cells | High | Protein (IHC) | HPA → |
| Colon | Endocrine cells | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Caudate | Glial cells | Not detected | Protein (IHC) | HPA → |
| Cerebellum | Cells in granular layer | Not detected | Protein (IHC) | HPA → |
| Cerebral cortex | Endothelial cells | Not detected | Protein (IHC) | HPA → |
| Hippocampus | Glial cells | Not detected | Protein (IHC) | HPA → |
Troubleshoot DSG2 staining in paraffin sections by checking retrieval, junctional pattern, controls and scoring before interpreting chromogenic signal.
Anti-DSG2 antibodies have IHC images from human and rat paraffin sections and IF/ICC images from MCF-7 cells (catalog image captions: M02035-2, A02035, PA1559).
M02035-2 has IHC images from human breast cancer, hepatocellular carcinoma, and laryngeal squamous cell carcinoma paraffin sections (M02035-2 image captions). A02035 has IHC images from human appendicitis, prostatic cancer, and rectal cancer paraffin sections plus IF/ICC data from MCF-7 cells; PA1559 has IHC images from human breast carcinoma, lung cancer, and rat intestine paraffin sections plus IF/ICC data from MCF-7 cells (A02035 and PA1559 image captions).
Which to pick: For human tissue IHC, choose mouse monoclonal M02035-2 at 2–5 µg/ml; its own paraffin-section images used EDTA retrieval at pH 8.0, and the fixative is unreported (M02035-2 catalog entry and image captions). For IF/ICC, choose A02035 or PA1559 at 2 µg/ml; both have MCF-7 IF/ICC images (A02035 and PA1559 catalog entries and IF image captions). For work across species, consider PA1559: its catalog lists human, mouse, and rat reactivity, while its own paraffin-section IHC images show human and rat tissue; the fixative is unreported (PA1559 catalog entry and IHC image captions).