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- Table of Contents
Plan ENO1 paraffin IHC using bronchial basal cells as a positive reference (HPA tissue IHC). The catalog antibody's IHC dilution is 0.5–1 μg/mL (datasheet A01250-1); assess cytoplasmic and nuclear staining (HPA tissue IHC).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Cytoplasmic and nuclear staining (HPA tissue IHC) | |
| Staining pattern | Widespread cytoplasmic and nuclear staining (HPA tissue IHC) | |
| Antigen retrieval | EDTA pH 8.0 HIER, heat-mediated (datasheet A01250-1) | |
| Positive control | Bronchus+4 more · see all | |
| Negative control | None in HPA (detected in all 45 tissues); use no-primary + isotype controls |
| Fixation | Keep fixation consistent across sections (standard IHC practice; not target-specific). Selected-image fixative and duration unreported (datasheet A01250-1); verify before use. | |
| Caveat | Splice or transcript discrepancies may complicate interpretation (HPA tissue IHC) | |
| Regulation | Alpha/alpha occurs in most adult tissues (UniProt) | |
| Isoform / epitope | 2 isoforms: alpha-enolase and MBP-1; check epitope coverage (UniProt) |
The catalog antibody uses EDTA pH 8.0 heat retrieval (datasheet A01250-1). Four published ENO1 IHC protocols provide additional starting conditions (PMC12571633; PMC10931177; PMC7893569; PMC3233504).
| Sample | Paraffin-embedded human liver cancer tissue; fixative not specified (datasheet A01250-1) |
| Fixation | Image fixative and duration unreported (datasheet A01250-1); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: EDTA pH 8.0 (datasheet A01250-1); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A01250-1) |
| Primary antibody | Rabbit anti-ENO1, 0.5-1μg/ml (datasheet A01250-1) |
| Primary incubation | Overnight at 4 °C (datasheet A01250-1) |
| Detection | Streptavidin-biotin complex (SABC), DAB chromogen (datasheet A01250-1) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | ENO1-positive staining in basal cells of bronchus (HPA tissue IHC: High). HPA tissue profile: Ubiquitous cytoplasmic and nuclear expression. No signal in the no-primary control. |
In paraffin IHC, expect ENO1 in cytoplasm and sometimes nuclei across many tissues, with strong staining reported in bronchial basal cells, fallopian tube non-ciliated cells, and lung alveolar type I cells (HPA tissue IHC: ubiquitous cytoplasmic and nuclear expression; High in those cells). ENO1 can also reach the cell membrane despite having no transmembrane segment (UniProt P06733: subcellular location and topology). HPA rates its tissue pattern Supported, with medium RNA–staining consistency and a splice or transcript discrepancy (HPA tissue IHC: reliability).
| Bronchial basal cells show strong cytoplasmic chromogen, with or without nuclear staining. | This fits a reported high-staining cell population and the broad tissue pattern (HPA tissue IHC: High in bronchial basal cells; ubiquitous cytoplasmic and nuclear expression). Judge compartment and cell identity together; intensity alone cannot establish specificity, especially where HPA reports only medium consistency between staining and RNA (HPA tissue IHC: reliability). |
| The strongest deposit appears exclusively in an unrelated compartment, while cytoplasm is clear. | Recheck the result against the expected cytoplasmic and nuclear tissue pattern (HPA tissue IHC: profile). Membrane-associated signal can be plausible because ENO1 may translocate there, so membrane staining alone is not an artifact (UniProt P06733: subcellular location). An isolated incompatible pattern warrants review of morphology, controls, and detection background (general IHC practice). |
| A cell population stains strongly where the chosen tissue reference predicts only low staining. | Treat this as a specificity question, not an automatic negative result: HPA lists cardiomyocytes, smooth muscle cells, skeletal myocytes, and soft-tissue fibroblasts as Low, and lists no negative population (HPA tissue IHC: low and negative lists). If staining ignores cell boundaries or persists in a no-primary control, assess nonspecific antibody binding or endogenous detection activity (general IHC practice). |
| Pale chromogen covers much of the section, including spaces between cells. | That distribution cannot be scored confidently as intracellular ENO1. Use cell outlines and a matched no-primary control to distinguish tissue signal from residual detection background (general IHC practice). Genuine ENO1 tissue staining is described as cytoplasmic and nuclear; a broad extracellular haze does not reproduce that profile (HPA tissue IHC: profile). |
| A known high-staining cell population has no convincing signal. | Check that the reference cells are present before calling the run negative: bronchial basal cells, fallopian tube non-ciliated cells, and lung alveolar type I cells are reported High (HPA tissue IHC: positive list). Then check the IHC-validated antibody, detection reagents, and a concurrent positive control; review retrieval as a general paraffin-IHC optimization step, without assuming ENO1-specific fixation sensitivity (general IHC practice). |
| Tissue and cell identity | ENO1 is broadly expressed, but reported levels differ by cell population: bronchial basal cells are High, adipocytes in adipose tissue are Medium, and cardiomyocytes are Low (HPA tissue IHC: positive and low lists). Choose a reference by its named cell population rather than treating every cell in a tissue as equally positive. |
| Compartment and topology | UniProt places ENO1 in cytoplasm, nucleus, and sometimes cell membrane; it has no transmembrane segment (UniProt P06733: subcellular location and topology). Interpret a possible membrane rim alongside intracellular signal and controls rather than assuming that all membrane-associated color is off-target. |
| Isoforms and antibody coverage | UniProt lists alpha-enolase and MBP-1 isoforms (UniProt P06733: isoforms). The supplied records give no epitope or isoform coverage for the catalog antibody, so a change in nuclear versus cytoplasmic staining cannot be assigned to one isoform from this IHC image alone. |
| Antibody evidence | Three listed antibodies have Supported IHC status, whereas two have no IHC status in the supplied list (HPA antibodies: CAB018614, CAB069394, CAB080034; HPA068284, HPA068721). HPA also flags medium RNA–staining consistency and a splice or transcript discrepancy for tissue IHC (HPA tissue IHC: reliability). Keep those limits in mind when comparing sections. |
| IF/ICC Q&A: where should signal appear? | HPA describes enhanced plasma-membrane and cytosol localization in ICC-IF images; UniProt also permits nuclear localization (HPA subcellular ICC-IF: main location; UniProt P06733: subcellular location). Use the IF/ICC guide for that application; the ICC-IF localization summary does not supply a paraffin-IHC protocol. |
| Situation | Likely cause | Next action |
|---|---|---|
| No color in bronchial basal cells. | The expected high-staining cells may be absent, or the staining run may have failed (HPA tissue IHC: High in bronchial basal cells; general IHC practice). | Confirm cell identity on the counterstain, then inspect the concurrent positive control and detection steps; optimize retrieval as general paraffin-IHC practice. |
| Strong staining throughout cardiomyocytes. | This differs from the reported Low level, but Low does not mean absent (HPA tissue IHC: Low in cardiomyocytes). | Compare with a matched reference and no-primary control; review exposure or chromogen development and antibody dilution as general IHC practice. |
| Only a membrane rim is visible. | Membrane localization is biologically possible, although tissue IHC is described chiefly as cytoplasmic and nuclear (UniProt P06733: subcellular location; HPA tissue IHC: profile). | Check cell boundaries, intracellular staining, and controls before deciding whether the rim is specific (general IHC practice). |
| Color remains in the no-primary control. | The signal can arise from endogenous detection activity or nonspecific reagent deposition (general IHC practice). | Review the detection-system block and background controls, then repeat scoring on a clean run (general IHC practice). |
| Cytoplasm is obscured by diffuse haze. | Excess background can prevent compartment scoring (general IHC practice). | Check blocking, washes, antibody dilution, and chromogen development; score only clear cell-bound signal (general IHC practice). |
| Nuclear staining differs between sections. | Nuclear ENO1 is reported, but the supplied records do not identify which isoform an individual IHC antibody detects (HPA tissue IHC: profile; UniProt P06733: isoforms). | Compare matched cells and controls, and check documented antibody epitope coverage before assigning an isoform explanation (general IHC practice). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Supported — Medium consistency between antibody staining and RNA expression data. Caution, Splice and/or transcript discrepancy exists.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Bronchus | Basal cells | High | Protein (IHC) | HPA → |
| Fallopian tube | Non-ciliated cells | High | Protein (IHC) | HPA → |
| Lung | Alveolar cells type I | High | Protein (IHC) | HPA → |
| Adipose tissue | Adipocytes | Medium | Protein (IHC) | HPA → |
| Adrenal gland | Glandular cells | Medium | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| None in HPA: ENO1 is detected in all 45 scored tissues. Use a no-primary (secondary-only) and an isotype control instead. | ||||
Troubleshoot ENO1 staining in paraffin sections by checking retrieval, compartment patterns and controls before comparing staining across samples.
The catalog shows paraffin-section IHC in human, mouse and rat tissues (A01250-1 and A01250-3 IHC captions), plus IF in human A431 cells (A01250-1 IF caption).
A01250-1 shows paraffin-section IHC in human liver cancer and mouse and rat testis, plus IF in A431 cells (A01250-1 image captions); A01250-3 shows paraffin-section IHC in mouse and rat testis and human cerebellum (A01250-3 IHC captions). M01250 lists IF/ICC among its applications and has a paraffin-section human colon IHC caption, although IHC is absent from its application list (M01250 catalog applications and IHC caption).
Which to pick: Choose A01250-1 for tissue IHC when documented human, mouse and rat examples are useful; A01250-3 also has paraffin-section IHC examples in those species (A01250-1 and A01250-3 IHC captions). For IF/ICC, A01250-1 has a direct A431 IF example, while monoclonal M01250 lists IF/ICC without an IF image in this payload (A01250-1 IF caption; M01250 catalog applications and image captions). A01250-1 has the broadest listed reactivity, including monkey, though its IHC captions cover only human, mouse and rat; neither tissue antibody’s IHC captions report the fixative (A01250-1 catalog reactivity and IHC captions; A01250-3 IHC captions).