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- Table of Contents
This guide uses adipose adipocytes as a high-staining reference for GNG2 chromogenic IHC in paraffin sections (HPA tissue IHC). Score membranous and cytoplasmic staining cautiously because the tissue profile awaits external verification (HPA tissue IHC).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Membranous and cytoplasmic tissue staining (HPA tissue IHC) | |
| Staining pattern | Widespread membrane/cytoplasm; high in adipocytes and neuropil (HPA tissue IHC) | |
| Antigen retrieval | EDTA pH 8.0 HIER, heat-mediated (datasheet A06975-1) | |
| Positive control | Adipose tissue+4 more · see all | |
| Negative control | Adrenal gland+4 more · see all |
| Fixation | Keep fixation consistent across sections (standard IHC practice; not target-specific) | |
| Caveat | Tissue staining awaits external verification (HPA tissue IHC) | |
| Regulation | Fetal tissue expression is reported (UniProt) | |
| Isoform / epitope | No annotated isoforms; mature chain spans 2–68 (UniProt) |
The catalog antibody’s IHC-P protocol is accompanied by three published chromogenic GNG2 IHC protocols for claustrum studies (PMC6555083; PMC3434180; PMC3975097).
| Sample | Paraffin-embedded human appendicitis tissue; fixative not specified (datasheet A06975-1) |
| Fixation | Image fixative and duration unreported (datasheet A06975-1); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: EDTA pH 8.0 (datasheet A06975-1); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A06975-1) |
| Primary antibody | Rabbit anti-GNG2, 2-5μg/ml (datasheet A06975-1) |
| Primary incubation | Overnight at 4 °C (datasheet A06975-1) |
| Detection | Streptavidin-biotin complex (SABC), DAB chromogen (datasheet A06975-1) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | GNG2-positive staining in adipocytes of adipose tissue (HPA tissue IHC: High). HPA tissue profile: Ubiquitous membranous and cytoplasmic expression. No signal in the no-primary control. |
GNG2 is annotated at the cell membrane and has no transmembrane segment (UniProt P59768 topology). In paraffin-section IHC, expect membranous and cytoplasmic staining in selected cell populations, including adipocytes and smooth muscle cells (HPA tissue IHC). Treat the pattern as provisional: HPA rates tissue IHC reliability Uncertain because staining includes cells or structures that have not been annotated, and external verification is pending (HPA tissue IHC).
| Adipocytes or smooth muscle cells show distinct membranous staining with some cytoplasmic signal. | This fits HPA's ubiquitous membranous and cytoplasmic tissue-IHC profile and its High calls for adipocytes in adipose tissue and smooth muscle cells. Judge the stained cells and compartment together; HPA rates the tissue-IHC pattern Uncertain (HPA tissue IHC). |
| Cerebral cortex neuropil stains strongly, while individual cell borders are difficult to resolve. | Neuropil is a High staining structure in the HPA tissue record, so its appearance can support the expected distribution. Do not assign that signal to a particular cell type from neuropil staining alone; HPA's tissue-IHC reliability remains Uncertain (HPA tissue IHC). |
| Nuclei dominate the staining, with little signal at cell borders or in cytoplasm. | A nuclear-dominant pattern conflicts with the reported membrane and cytoplasmic tissue profile (HPA tissue IHC) and cell-membrane annotation (UniProt P59768). Investigate assay artefact or nonspecific staining before interpreting the nuclei as GNG2; the supplied sources do not establish nuclear localisation. |
| A population listed as not detected stains strongly, such as adrenal glandular cells or bone marrow hematopoietic cells. | The staining conflicts with those specific HPA observations and warrants checks for cross-reactivity or endogenous detection activity (HPA tissue IHC; general chromogenic IHC practice). A single discordant population is not proof of either cause: HPA rates tissue IHC Uncertain, and its calls are cell specific. |
| Diffuse colour covers tissue and empty areas, or a known positive population shows no convincing signal. | Colour beyond cellular structures suggests background from the detection workflow; absence in adipocytes or smooth muscle cells conflicts with HPA High calls (HPA tissue IHC; general IHC practice). Check controls and assay performance before scoring an experimental specimen as positive or negative. |
| Cellular location and topology | UniProt places GNG2 at the cell membrane and annotates no transmembrane segment (UniProt P59768 topology). HPA reports membranous and cytoplasmic tissue staining (HPA tissue IHC); assess both compartments instead of requiring a sharp membrane-only outline. |
| Choice of reference tissue | Adipose adipocytes, cerebral cortex neuropil and smooth muscle cells are High HPA observations (HPA tissue IHC). Use an identified positive population when judging assay performance; neuropil provides a structure-level comparison rather than a cell-type call. |
| Limits of a negative comparison | HPA lists adrenal glandular cells and bone marrow hematopoietic cells as not detected, while other cells and tissues stain (HPA tissue IHC). Compare the specified population rather than treating the whole organ as a universal negative control. |
| Strength of antibody evidence | Both listed antibodies have Uncertain IHC status, and the tissue profile awaits external verification (HPA antibodies; HPA tissue IHC). Give weight to localisation, cell identity and controls together; an isolated positive field cannot establish specificity. |
| Antigen retrieval and detection controls | No GNG2-specific retrieval condition or fixation-sensitivity result is supplied. Optimise retrieval against a positive section and include detection controls as general paraffin-IHC practice; these steps do not predict a GNG2-specific fixation effect. |
| IF/ICC Q: What distribution should be expected? | A: HPA reports an approved main plasma-membrane location and additional vesicular location in ICC-IF (HPA subcellular). This is a localisation reference for IF/ICC, not an IHC protocol or proof that vesicles will resolve in chromogenic paraffin sections. |
| Situation | Likely cause | Next action |
|---|---|---|
| A known positive section has no signal in adipocytes or smooth muscle cells. | The result conflicts with HPA High observations in those populations (HPA tissue IHC); assay setup or an unsuitable antibody may be involved, but the supplied sources do not identify a GNG2-specific fixation cause. | Check section integrity, retrieval, primary-antibody and detection steps against assay controls, then repeat with a verified positive section (general IHC practice). Do not infer true tissue absence from an unvalidated run. |
| Colour appears mainly in nuclei. | Nuclear-dominant staining does not match HPA's membranous and cytoplasmic tissue profile or UniProt's cell-membrane annotation (HPA tissue IHC; UniProt P59768). | Compare with a no-primary control and an identified positive population, then review counterstain and detection deposits (general chromogenic IHC practice). Withhold a GNG2 localisation call unless the expected compartments are convincing. |
| Strong signal appears in adrenal glandular cells or bone marrow hematopoietic cells. | Those populations are listed as Not detected (HPA tissue IHC). Cross-reactivity or endogenous detection activity is possible, but HPA's Uncertain reliability prevents a definitive explanation. | Confirm the cell population, inspect a no-primary control, and reassess blocking and detection conditions (general IHC practice). Compare with a HPA High population before assigning the discordant signal to GNG2. |
| Diffuse stain obscures cell boundaries or appears outside tissue. | The distribution cannot be assessed against the expected membrane and cytoplasmic profile (HPA tissue IHC). Background may arise from the chromogenic detection workflow (general IHC practice). | Inspect no-primary and detection controls, then adjust blocking, washing or detection development as indicated by those controls (general IHC practice). Score only cellular signal with a discernible location. |
| Only weak staining is seen in a selected region. | HPA reports different levels by population: kidney tubular cells and ovarian stroma cells are Medium, while some brain and epithelial populations are Low (HPA tissue IHC). Weakness alone does not establish assay failure. | Identify the population and compare it with a High reference in the same run (HPA tissue IHC; general IHC practice). Interpret intensity by cell type and keep the HPA reliability caveat in the report. |
| A section shows cytoplasmic signal without a crisp membrane outline. | HPA explicitly describes membranous and cytoplasmic tissue expression, while UniProt annotates GNG2 at the cell membrane (HPA tissue IHC; UniProt P59768). Cytoplasmic staining alone therefore needs context, not automatic rejection. | Assess whether signal follows the reported positive population, check background controls, and avoid claiming a precise compartment from diffuse chromogenic colour (HPA tissue IHC; general IHC practice). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Uncertain — Antibody staining in cells/structures not annotated, view images. Pending external verification.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | High | Protein (IHC) | HPA → |
| Cerebral cortex | Neuropil | High | Protein (IHC) | HPA → |
| Smooth muscle | Smooth muscle cells | High | Protein (IHC) | HPA → |
| Breast | Adipocytes | Medium | Protein (IHC) | HPA → |
| Kidney | Cells in tubules | Medium | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adrenal gland | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | Not detected | Protein (IHC) | HPA → |
| Cervix | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Duodenum | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Fallopian tube | Glandular cells | Not detected | Protein (IHC) | HPA → |
Use compartment-aware controls and the catalog antibody’s documented paraffin-section conditions when troubleshooting GNG2 chromogenic IHC (UniProt P59768; caption A06975-1).
Validated anti-GNG2 antibodies have IHC images from human paraffin sections and an IF image from human cells (catalog image captions); catalog reactivity spans human, mouse and rat (catalog reactivity).
A06975-1 has IHC images from human appendicitis, bladder cancer and lung cancer paraffin sections; M06975 has an IHC image from human brain paraffin sections (catalog image captions). M06975-1 has an IF/ICC image from Caco-2 cells (catalog image caption).
Which to pick: For tissue IHC, choose A06975-1 for human paraffin sections; its caption does not report the fixative (A06975-1 IHC caption). M06975 is another tissue option with an image from paraffin-section human brain paraffin sections (M06975 IHC caption). For IF/ICC, choose mouse monoclonal M06975-1, which has a Caco-2 IF image (catalog clone and M06975-1 IF caption); for cross-species planning, A06975-1 lists human, mouse and rat reactivity, though its documented IHC images are human only (catalog reactivity; A06975-1 IHC captions). The selected A06975-1 tissue-IHC caption documents paraffin sections, but does not specify the fixative (selected-SKU IHC image A06975-1).