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- Table of Contents
Plan paraffin-section GSTA1 IHC around cytoplasmic staining in hepatocytes and kidney tubule cells (HPA tissue IHC). This guide covers fixation consistency, antibody specificity, chromogenic detection and tissue-based scoring.
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Cytoplasmic tissue staining (HPA tissue IHC) | |
| Staining pattern | Cytoplasmic signal in hepatocytes and kidney tubule cells (HPA tissue IHC) | |
| Antigen retrieval | Citrate pH 6 HIER, heat-mediated (datasheet A01462-1) | |
| Positive control | Adrenal gland+4 more · see all | |
| Negative control | Adipose tissue+4 more · see all |
| Fixation | Keep fixation consistent across sections. (standard IHC practice; not target-specific) | |
| Caveat | GSTA-family recognition can confound GSTA1 scoring (datasheet A01462-1) | |
| Regulation | Tissue-dependent expression (HPA tissue IHC) | |
| Isoform / epitope | No annotated isoforms; N-terminal processing may affect epitopes (UniProt) |
The catalog antibody’s IHC-P protocol is complemented by 3 published GSTA1 IHC protocols (PMC4476686; PMC12997922; PMC6930411).
| Sample | Paraffin-embedded human lung cancer tissues; fixative not specified (datasheet A01462-1) |
| Fixation | Image fixative and duration unreported (datasheet A01462-1); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: Citrate pH 6, 20 min (datasheet A01462-1) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A01462-1) |
| Primary antibody | Rabbit anti-GSTA1, 1μg/ml (datasheet A01462-1) |
| Primary incubation | Overnight at 4 °C (datasheet A01462-1) |
| Detection | Streptavidin-biotin complex (SABC), DAB chromogen (datasheet A01462-1) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | GSTA1-positive staining in glandular cells of adrenal gland (HPA tissue IHC: High). HPA tissue profile: Distinct cytoplasmic expression in several tissues including liver, kidney and adrenal gland. No signal in the no-primary control. |
GSTA1 is a cytoplasmic protein with no transmembrane segment (UniProt P08263). In paraffin-section IHC, expect cytoplasmic staining in hepatocytes, kidney tubular cells, and adrenal glandular cells, each reported as High by HPA (HPA tissue IHC). HPA rates the tissue pattern Supported, with medium agreement between staining and RNA data, and cautions that the antibodies may target proteins from more than one gene (HPA tissue IHC).
| Strong cytoplasmic stain in hepatocytes, kidney tubular cells, or adrenal glandular cells. | This matches the reported compartment and High staining in those cell populations (UniProt P08263; HPA tissue IHC). Compare cell-by-cell distribution with the counterstain; intensity alone cannot establish that every stained protein is GSTA1 because HPA flags possible multi-gene antibody targeting (HPA tissue IHC). |
| Predominantly nuclear or membrane-rim staining, with little cytoplasmic signal. | This conflicts with the cytoplasmic assignment and absence of a transmembrane segment (UniProt P08263). Treat it as a suspect pattern: review morphology, controls, and detection conditions before assigning it to GSTA1. A different compartment by itself does not identify the source of the stain (standard IHC practice). |
| Strong staining in adipocytes or bone-marrow hematopoietic cells. | HPA reports GSTA1 as Not detected in those cell types (HPA tissue IHC). Recheck cell identity and controls; antibody recognition of another protein or endogenous detection activity are possibilities, especially given HPA's multi-gene caution (HPA tissue IHC; standard IHC practice). |
| Brown deposit spread across the section without clear cell boundaries. | A diffuse deposit is hard to score as cytoplasmic GSTA1 because the reported pattern is cell-associated (HPA tissue IHC; UniProt P08263). Review a no-primary control, blocking, washing, and chromogen development to distinguish background from interpretable cellular staining (standard IHC practice). |
| No visible stain in a section with identifiable hepatocytes. | This disagrees with the High hepatocyte staining reported by HPA (HPA tissue IHC), but a negative slide alone cannot establish absent GSTA1. Confirm that a known-positive section and the detection controls work, then assess tissue preservation and assay conditions using general IHC practice. |
| Cell compartment and topology | UniProt places GSTA1 in the cytoplasm and reports no transmembrane segment (UniProt P08263). Score signal within the cell body against the counterstain; a crisp membrane outline or isolated nuclear signal does not match that assignment (standard IHC interpretation). |
| Tissue and cell-type distribution | HPA reports High staining in hepatocytes, kidney tubular cells, adrenal glandular cells, duodenal endocrine cells, gallbladder glandular cells, and testicular Leydig cells (HPA tissue IHC). Its Not detected calls apply to specified cell types, not necessarily every cell in those tissues (HPA tissue IHC). |
| Antibody interpretation | The HPA tissue profile is Supported, yet HPA describes only medium staining–RNA consistency and cautions that antibodies may target proteins from more than one gene (HPA tissue IHC). Agreement with the expected pattern strengthens interpretation but does not establish gene-exclusive recognition. |
| Processing and protein forms | UniProt records full-length residues 1–222 and an N-terminally processed 2–222 chain, with N-terminal acetylation among the listed modifications; it lists no isoforms (UniProt P08263). These annotations do not specify an IHC epitope or demonstrate altered staining after tissue processing. |
| Situation | Likely cause | Next action |
|---|---|---|
| A liver positive control is weak or blank. | The result conflicts with HPA's High hepatocyte staining, but the failed step is undetermined (HPA tissue IHC). | Verify hepatocyte morphology, primary-antibody application, detection reagents, and counterstain; compare with a working control section before interpreting the specimen (standard IHC practice). |
| Staining is mainly nuclear or outlines cell membranes. | That distribution conflicts with cytoplasmic GSTA1 and its lack of a transmembrane segment (UniProt P08263). | Check a no-primary control and inspect whether precipitate or overlapping cells create the apparent compartment; score only well-resolved cellular signal (standard IHC practice). |
| Adipocytes or marrow hematopoietic cells appear strongly positive. | HPA reports Not detected in these populations; non-target recognition or endogenous detection activity is possible (HPA tissue IHC; standard IHC practice). | Confirm the cell type, inspect no-primary and positive controls, and review endogenous-enzyme blocking if using enzyme-based chromogenic detection (standard IHC practice). |
| Diffuse brown background obscures cell boundaries. | Background from incomplete blocking, washing, or excess chromogen development is possible (standard IHC practice). | Compare a no-primary control and review blocking, washes, and development time; interpret only signal whose cellular compartment remains distinguishable (standard IHC practice). |
| Some cells stain while nearby cells in the same section do not. | HPA reports staining by cell type, so mixed cell populations need cell-specific interpretation; staining intensity alone cannot establish identity (HPA tissue IHC). | Use morphology and the counterstain to score the specified cell population, then compare it with a relevant positive control (standard IHC practice). |
| What pattern should IF/ICC show? | HPA reports supported cytosolic localization in ICC-IF, while cautioning that the antibodies may target proteins from multiple genes (HPA subcellular ICC-IF). | Expect cytosolic fluorescence and assess cell boundaries against an appropriate counterstain; use the separate IF/ICC guide for assay setup (HPA subcellular ICC-IF; standard IF practice). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Supported — Medium consistency between antibody staining and RNA expression data. Caution, targets protein from more than one gene.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adrenal gland | Glandular cells | High | Protein (IHC) | HPA → |
| Duodenum | Endocrine cells | High | Protein (IHC) | HPA → |
| Gallbladder | Glandular cells | High | Protein (IHC) | HPA → |
| Kidney | Cells in tubules | High | Protein (IHC) | HPA → |
| Liver | Hepatocytes | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Appendix | Endocrine cells | Not detected | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | Not detected | Protein (IHC) | HPA → |
| Caudate | Glial cells | Not detected | Protein (IHC) | HPA → |
| Cerebellum | Cells in granular layer | Not detected | Protein (IHC) | HPA → |
Troubleshoot GSTA1 staining by checking retrieval, cytoplasmic localisation, cell identity and antibody specificity before comparing signal across sections.
IHC and IF figures show paraffin sections of human lung and liver cancer and mouse and rat liver (A01462-1/PB9627 captions); catalog reactivity spans human, mouse and rat (catalog).
A01462-1 renders with a human lung cancer IHC figure; its other IHC captions document human liver cancer (A01462-1 captions). PB9627 renders with a mouse liver IF figure, and its captions also document rat liver IF (PB9627 captions).
Which to pick: For chromogenic tissue IHC, choose A01462-1: its own paraffin-section caption documents citrate pH 6 retrieval and DAB detection; the fixative is unreported (A01462-1 IHC caption). For tissue IF, choose PB9627 because its own captions show mouse and rat liver sections; for ICC, A01462-3 lists that application but has no supplied figure (PB9627 IF captions; A01462-3 catalog). All three list human, mouse and rat reactivity, but PB9627’s stated IHC-P dilution applies to mouse and rat, so A01462-1 has the stronger supplied evidence for human tissue IHC (catalog; A01462-1 IHC captions).