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- Table of Contents
Plan HSPB8 paraffin IHC using the cytoplasmic tissue pattern and reported positive and undetected cell populations as controls (HPA tissue IHC). The catalog antibody’s tissue IHC example uses 1 µg/mL primary antibody with chromogenic detection (datasheet A02492-2).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Cytoplasmic staining in several tissues (HPA tissue IHC) | |
| Staining pattern | Cytoplasmic staining across several tissue cell types (HPA tissue IHC) | |
| Antigen retrieval | Citrate pH 6 HIER, heat-mediated (datasheet A02492-2) | |
| Positive control | Cerebral cortex+4 more · see all | |
| Negative control | Adipose tissue+3 more · see all |
| Fixation | Matched tissue-IHC evidence does not establish the fixation claim. Validate the specimen-specific method before use. (selected-SKU IHC image A02492-2) | |
| Caveat | Antibody staining and RNA show low consistency (HPA tissue IHC) | |
| Regulation | Skeletal muscle RNA is tissue enhanced (HPA tissue RNA) | |
| Isoform / epitope | No annotated isoforms; one 1–196 chain (UniProt) |
The catalog antibody’s IHC-P protocol is paired with four published HSPB8 staining protocols covering muscle, nerve, bladder and spinal cord tissue (datasheet A02492-2; PMC articles below).
| Sample | Paraffin-embedded mouse pancreas tissues; fixative not specified (datasheet A02492-2) |
| Fixation | Image fixative and duration unreported (datasheet A02492-2); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: Citrate pH 6, 20 min (datasheet A02492-2) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A02492-2) |
| Primary antibody | Rabbit anti-HSPB8, 0.5-1μg/ml (datasheet A02492-2) |
| Primary incubation | Overnight at 4 °C (datasheet A02492-2) |
| Detection | Streptavidin-biotin complex (SABC), DAB chromogen (datasheet A02492-2) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | HSPB8-positive staining in neuronal cells of cerebral cortex (HPA tissue IHC: High). HPA tissue profile: Cytoplasmic expression in several different tissue types. No signal in the no-primary control. |
HSPB8 should show predominantly cytoplasmic staining in several tissue types (HPA: tissue IHC). Cytosolic localisation is supported by ICC-IF, while nuclear localisation is also reported; HSPB8 has no transmembrane segment (HPA: subcellular; UniProt Q9UJY1 topology). HPA reports high staining in specific neuronal, epithelial, alveolar, glandular and trophoblastic cells, but rates its tissue IHC profile Approved with low consistency between antibody staining and RNA expression (HPA: tissue IHC).
| Cytoplasmic signal in cerebral cortex neurons or lung alveolar cells. | This fits the reported compartment and cell types (HPA: tissue IHC, High in neuronal and alveolar cells). Judge staining in the identified cells rather than treating every cell in the section as an expected positive (HPA: tissue IHC). |
| Strong membrane-rim or extracellular staining dominates, with little intracellular signal. | That distribution is unexpected for a protein reported in the cytoplasm and nucleus, with no transmembrane segment (UniProt Q9UJY1 localisation and topology). Check morphology and detection background before interpreting it as HSPB8 (general IHC practice). |
| Strong staining appears in adipocytes or bone-marrow hematopoietic cells. | HPA reports these cells as Not detected (HPA: tissue IHC). Investigate antibody cross-reactivity or endogenous detection activity; a discordant cell pattern alone does not establish which cause applies (general IHC practice). |
| Color spreads across tissue, empty spaces or section edges without a clear cell pattern. | Diffuse deposition does not reproduce HPA's cell-associated cytoplasmic profile (HPA: tissue IHC). Review blocking, washes and detection controls for nonspecific background (general IHC practice). |
| No staining appears in a well-preserved, HPA-reported High cell population. | Absence in a reported positive population warrants a run check, but HPA notes low consistency between antibody staining and RNA expression (HPA: tissue IHC). Confirm cell identity, then review controls and IHC conditions before calling the sample negative (general IHC practice). |
| Compartment and cell identity | Interpret cytoplasmic staining in the named positive cells first (HPA: tissue IHC). Nuclear staining is possible, so it is not automatically an artefact; UniProt reports movement to nuclear foci during heat shock (HPA: subcellular; UniProt Q9UJY1 localisation). |
| Choice of comparison tissue | HPA reports High staining in cervix and esophagus squamous cells, pancreatic exocrine cells, placental trophoblasts, and stomach glandular cells; it reports Not detected in ovarian stroma and splenic red-pulp cells (HPA: tissue IHC). These are cell-specific reference patterns, not guarantees for every specimen. |
| Evidence and antibody scope | The tissue profile is Approved despite low agreement with RNA expression, and antibody HPA015876 is Approved for IHC (HPA: tissue IHC; HPA: antibody validation). Interpret unexpected patterns cautiously; this record does not provide an IHC Enhanced designation (HPA: antibody validation). |
| Topology and processing | UniProt lists a 1–196 chain, no signal peptide or propeptide, and no transmembrane segment (UniProt Q9UJY1 processing and topology). These features support checking intracellular localisation; they do not identify a retrieval condition or establish fixation sensitivity. |
| IF/ICC Q&A: should a nuclear signal be rejected? | No. HPA reports mainly cytosolic localisation with additional supported nucleoplasmic localisation in ICC-IF, and UniProt reports nuclear foci during heat shock (HPA: subcellular; UniProt Q9UJY1 localisation). Those observations do not set the expected nuclear intensity in paraffin IHC. |
| Situation | Likely cause | Next action |
|---|---|---|
| Positive reference cells show no chromogenic signal. | The IHC run may have failed, or the sampled section may lack the expected cells; HPA's tissue profile also has low RNA agreement (HPA: tissue IHC). | Verify the named cell population and inspect a concurrently stained reference and detection controls; then review retrieval and primary-antibody conditions as general IHC practice. |
| Signal is mainly at cell borders or outside cells. | The pattern conflicts with reported cytoplasmic and nuclear localisation and the lack of a transmembrane segment (UniProt Q9UJY1 localisation and topology). | Check section morphology and compare a no-primary control for detection background; repeat staining if the compartment remains unclear (general IHC practice). |
| Adipocytes stain strongly while expected positive cells do not. | HPA reports adipocytes as Not detected, making this a discordant cell pattern (HPA: tissue IHC). Cross-reactivity or endogenous detection activity is possible (general IHC practice). | Confirm cell identity and compare no-primary and detection controls; interpret the result cautiously until the source of signal is resolved (general IHC practice). |
| Background obscures cell boundaries throughout the section. | Diffuse color can arise from nonspecific antibody or detection signal (general IHC practice). It cannot be scored against HPA's cell-specific profile (HPA: tissue IHC). | Review blocking, washing and detection controls, then adjust the general IHC workflow according to the observed background source (general IHC practice). |
| Nuclear staining accompanies cytoplasmic staining. | Additional nuclear localisation is supported by ICC-IF, and nuclear foci are reported during heat shock (HPA: subcellular; UniProt Q9UJY1 localisation). | Check whether nuclear color is confined to identifiable cells and compare background controls; do not reject it solely because it is nuclear (general IHC practice). |
| A weak glandular signal seems inconsistent with a High reference. | HPA reports Low staining in rectum, prostate and breast glandular cells, but High staining in stomach glandular cells (HPA: tissue IHC). Glandular identity alone does not predict intensity. | Confirm the organ and named cell type before comparing intensity; score the observed cellular compartment and reference pattern separately (HPA: tissue IHC; general IHC practice). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Approved — Low consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Cerebral cortex | Neuronal cells | High | Protein (IHC) | HPA → |
| Cervix | Squamous epithelial cells | High | Protein (IHC) | HPA → |
| Esophagus | Squamous epithelial cells | High | Protein (IHC) | HPA → |
| Lung | Alveolar cells | High | Protein (IHC) | HPA → |
| Pancreas | Exocrine glandular cells | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | Not detected | Protein (IHC) | HPA → |
| Ovary | Ovarian stroma cells | Not detected | Protein (IHC) | HPA → |
| Spleen | Cells in red pulp | Not detected | Protein (IHC) | HPA → |
Troubleshoot HSPB8 staining in paraffin sections by checking retrieval, cell type, compartment and controls before interpreting chromogenic signal.
HSPB8 examples cover paraffin-section IHC in mouse pancreas (A02492-2 image caption), ICC in HeLa cells (A02492 image caption), and IF in A431 cells (M02492-2 image caption).
A02492-2 shows IHC in paraffin-embedded mouse pancreas (A02492-2 image caption), while A02492 shows ICC in HeLa cells (A02492 image caption). M02492-2 shows IF in A431 cells (M02492-2 image caption).
Which to pick: For tissue IHC, choose A02492-2: its mouse pancreas caption documents paraffin sections, citrate retrieval at pH 6 for 20 minutes, and DAB detection; the fixative is unreported (A02492-2 IHC image caption). For IF/ICC, A02492 has a HeLa ICC image, while monoclonal M02492-2 has an A431 IF image (A02492 and M02492-2 image captions; catalog: M02492-2 clone 7D8). For cross-species IHC, A02492-2 lists human, mouse, and rat reactivity and has paraffin-section IHC images for all three (catalog: A02492-2; A02492-2 IHC image captions).