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- Table of Contents
Plan paraffin-section PIK3CG IHC with the catalog antibody at 2–5 μg/ml (datasheet A01517-2). Interpret cytoplasmic and membranous staining across tissue types while accounting for presumed off-target binding (HPA tissue IHC).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Cytoplasmic and membranous tissue staining (HPA tissue IHC) | |
| Staining pattern | Cytoplasmic/membranous staining across several tissue types (HPA tissue IHC) | |
| Antigen retrieval | EDTA pH 8.0 HIER, heat-mediated (datasheet A01517-2) | |
| Positive control | Adrenal gland+4 more · see all | |
| Negative control | Adipose tissue+4 more · see all |
| Fixation | Keep fixation consistent across sections. (standard IHC practice; not target-specific) | |
| Caveat | Presumed off-target binding may confound staining (HPA tissue IHC) | |
| Regulation | Stimulus-dependent expression is unreported (UniProt) | |
| Isoform / epitope | 0 listed isoforms; one full-length intracellular chain (UniProt) |
The catalog antibody’s IHC-P protocol is paired with one published PIK3CG IHC protocol for hepatocellular carcinoma tissue (PMC8805872).
| Sample | Paraffin-embedded human breast cancer tissue; fixative not specified (datasheet A01517-2) |
| Fixation | Image fixative and duration unreported (datasheet A01517-2); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: EDTA pH 8.0 (datasheet A01517-2); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A01517-2) |
| Primary antibody | Rabbit anti-PIK3CG, 2-5μg/ml (datasheet A01517-2) |
| Primary incubation | Overnight at 4 °C (datasheet A01517-2) |
| Detection | Streptavidin-biotin complex (SABC), DAB chromogen (datasheet A01517-2) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | PIK3CG-positive staining in glandular cells of adrenal gland (HPA tissue IHC: Medium). HPA tissue profile: Cytoplasmic and membranous expression in several different tissue types, including lymphoid tissues. No signal in the no-primary control. |
PIK3CG staining should be cytoplasmic and membranous in several tissue types, including lymphoid tissues (HPA: tissue IHC profile). Bone marrow hematopoietic cells and several glandular cell populations show medium staining (HPA: tissue IHC). A cell membrane signal is plausible for this cytoplasmic, membrane associated protein without a transmembrane segment (UniProt P48736: localization and topology). Interpret the pattern with care: HPA rates tissue IHC reliability as Enhanced but reports presumed off target binding (HPA: reliability description).
| Cytoplasmic staining, with membrane accentuation, in bone marrow hematopoietic cells. | This fits a documented medium staining cell population and the reported compartments (HPA: bone marrow IHC; HPA: tissue IHC profile). Assess the hematopoietic cells themselves; staining elsewhere in the section does not establish that they are positive (general IHC practice). |
| Predominantly nuclear staining with little cytoplasmic or membrane signal. | This does not fit the reported localization (UniProt P48736: cytoplasm and cell membrane; HPA: tissue IHC profile). Treat an isolated nuclear pattern as suspect and compare its distribution with controls before scoring it as PIK3CG (general IHC practice). |
| Prominent staining in adipocytes or cardiomyocytes. | HPA reports PIK3CG as not detected in these cells (HPA: adipose tissue and heart muscle IHC). Review cell identity, nearby infiltrating cells and control staining; off target antibody binding or endogenous detection activity could explain the discrepancy (HPA: reliability description; general IHC practice). |
| Chromogen haze spreads across cells, stroma and blank areas. | A field wide deposit lacks the cell and compartment pattern described for PIK3CG (HPA: tissue IHC profile). Consider background from the detection workflow, including insufficient blocking or washing, and inspect a no primary control (general IHC practice). |
| No staining in bone marrow hematopoietic cells. | This conflicts with their reported medium staining (HPA: bone marrow IHC). First confirm the cells are present and the detection controls worked; then review the IHC run before calling another specimen negative (general IHC practice). |
| Compartment and topology | PIK3CG is cytoplasmic and associated with the cell membrane, with no transmembrane segment (UniProt P48736: localization and topology). Read membrane accentuation as localization, not evidence that the protein spans the membrane; evaluate it together with cytoplasmic staining (HPA: tissue IHC profile). |
| Cell context | HPA reports medium staining in bone marrow hematopoietic cells and in glandular cells from several organs (HPA: tissue IHC). It reports no detection in adipocytes and cardiomyocytes (HPA: tissue IHC). Score identified cells rather than assigning one result to an entire mixed tissue section (general IHC practice). |
| Evidence and antibody validation | Tissue IHC reliability is Enhanced, while the record notes medium agreement with RNA data and presumed off target binding that was disregarded (HPA: reliability description). Antibody HPA069976 is rated Enhanced for IHC and Supported for ICC (HPA: antibody validation); neither rating resolves every unexpected cell specific result. |
| Heart interpretation | UniProt lists heart in tissue specificity and describes cardiac functions (UniProt P48736: tissue specificity and function), whereas HPA reports no detection in cardiomyocytes (HPA: heart muscle IHC). Record the cell type and assay when comparing these findings; do not convert a tissue level annotation into an expected cardiomyocyte IHC positive. |
| IF/ICC Q&A: Where should signal appear? | Mainly at the plasma membrane, with additional cytosolic signal in the HPA ICC-IF record (HPA: subcellular localization). This supports a compartment check for IF/ICC; its Supported ICC rating and cell images do not set an IHC intensity threshold (HPA: antibody validation and subcellular record). |
| Situation | Likely cause | Next action |
|---|---|---|
| Bone marrow hematopoietic cells lack signal. | A run or detection failure is possible when a documented medium staining population appears blank (HPA: bone marrow IHC; general IHC practice). | Confirm cell identity, check positive and no primary controls, then review the catalog antibody's IHC-P procedure and the run's retrieval and detection records (general IHC practice). Target specific fixation sensitivity is unreported in the supplied sources. |
| Nuclei dominate the staining. | The compartment conflicts with cytoplasmic and membrane localization (UniProt P48736: localization; HPA: tissue IHC profile). | Compare nuclear staining with the no primary control and review counterstain and detection background; score PIK3CG only where the cell pattern is credible (general IHC practice). |
| Adipocytes or cardiomyocytes appear broadly positive. | These cells are reported as not detected; off target binding or endogenous detection activity is possible (HPA: adipose tissue and heart muscle IHC; HPA: reliability description; general IHC practice). | Verify cell identity and inspect neighboring hematopoietic cells. Check no primary and detection controls before accepting the unexpected signal (general IHC practice). |
| The whole section has diffuse brown haze. | Nonspecific detection or inadequate washing may obscure the reported cell pattern (HPA: tissue IHC profile; general IHC practice). | Inspect no primary and detection controls, blocking, washes and chromogen development; repeat scoring only after the background is resolved (general IHC practice). |
| A lymphoid region looks uneven or faint. | HPA describes expression in lymphoid tissues but does not assign every cell in those regions an intensity in this payload (HPA: tissue IHC profile). | Identify and score individual cell populations, then compare with a documented positive such as bone marrow hematopoietic cells from the same validated workflow (HPA: bone marrow IHC; general IHC practice). |
| IHC and IF/ICC seem to show different membrane emphasis. | HPA tissue IHC reports both cytoplasmic and membranous staining, while its ICC-IF summary says mainly plasma membrane with additional cytosol (HPA: tissue IHC profile and subcellular record). | Compare compartments within each assay and its controls; do not require identical visual intensity across chromogenic sections and fluorescent cells (general IHC/IF practice). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Enhanced — Medium consistency between antibody staining and RNA expression data. Presumed off target binding observed and disregarded.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adrenal gland | Glandular cells | Medium | Protein (IHC) | HPA → |
| Appendix | Glandular cells | Medium | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | Medium | Protein (IHC) | HPA → |
| Breast | Glandular cells | Medium | Protein (IHC) | HPA → |
| Duodenum | Glandular cells | Medium | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Bronchus | Respiratory epithelial cells | Not detected | Protein (IHC) | HPA → |
| Cerebellum | Cells in granular layer | Not detected | Protein (IHC) | HPA → |
| Esophagus | Squamous epithelial cells | Not detected | Protein (IHC) | HPA → |
| Heart muscle | Cardiomyocytes | Not detected | Protein (IHC) | HPA → |
Troubleshoot PIK3CG staining by checking retrieval, compartment, cell identity and detection controls before assigning biological meaning to chromogenic signal.
A01517-2 has real IHC data from a human paraffin-embedded breast cancer section (image caption). Catalog reactivity includes human, mouse, and rat (catalog: reactivity); no IF data are supplied (catalog: IF images).
A01517-2 is listed for IHC and was shown on a human paraffin-embedded breast cancer section (catalog: applications; image caption). Its listed reactivity is human, mouse, and rat, while the supplied IHC image documents human tissue only (catalog: reactivity; image caption).
Which to pick: Choose A01517-2 for paraffin-section IHC: its image shows staining at 2 μg/ml after heat-mediated EDTA retrieval at pH 8.0 (image caption). For mouse or rat tissue, treat the listed reactivity as a starting point for validation; the supplied IHC image is human, the fixative is unreported, and clonality is unreported (catalog: reactivity; image caption; catalog: clone). No IF/ICC application or IF image is supplied for A01517-2, so this payload does not support an IF/ICC pick (catalog: applications; catalog: IF images).