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- Table of Contents
Plan RIPK1 IHC in paraffin sections using the observed cytoplasmic tissue pattern and high staining in several glandular cell types as reference points (HPA tissue IHC). Catalog antibody A00141 is validated for human IHC, with a reported concentration of 5–10 μg/mL (datasheet).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Cytoplasmic tissue staining (HPA tissue IHC) | |
| Staining pattern | Cytoplasmic staining; high in several glandular cell types (HPA tissue IHC) | |
| Antigen retrieval | Citrate pH 6.0 HIER, 95–98 °C, 20 min (rule: cytoplasmic / membrane antigen) | |
| Positive control | Appendix+4 more · see all | |
| Negative control | None in HPA (detected in all 45 tissues); use no-primary + isotype controls |
| Fixation | Keep fixation conditions consistent (standard IHC practice; not target-specific) | |
| Caveat | Low tissue specificity limits negative-tissue controls (HPA tissue IHC) | |
| Regulation | Expression regulation is unreported (UniProt) | |
| Isoform / epitope | 2 isoforms; antibody epitope coverage is unspecified (UniProt; datasheet) |
Compare the catalog antibody’s IHC-P protocol with published RIPK1 IHC methods for rat cerebellum, mouse frozen spleen, and temporomandibular joint specimens (PMC13582310; PMC11071064; PMC10902568).
| Sample | Tissue sections; selected-image fixative not specified (standard IHC workflow) |
| Fixation | Image fixative and duration unreported (datasheet A00141-1); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat-induced epitope retrieval in citrate buffer, pH 6.0, 20 min at 95–98 °C (standard rule: cytoplasmic / membrane antigen) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% normal serum of the secondary host, 30 min, room temperature (standard) |
| Primary antibody | Rabbit anti-RIPK1, 2.5 μg/mL (datasheet A00141-1) |
| Primary incubation | Overnight at 4 °C (standard) |
| Detection | HRP-polymer secondary, DAB chromogen 5–10 min (standard) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | RIPK1-positive staining in glandular cells of appendix (HPA tissue IHC: High). HPA tissue profile: Ubiquitous cytoplasmic expression. No signal in the no-primary control. |
RIPK1 should appear mainly in the cytoplasm, with possible membrane staining (UniProt Q13546; HPA subcellular). Expect staining in glandular cells of the colon and other listed digestive tissues (HPA: High). HPA describes tissue staining as ubiquitous cytoplasmic expression, with Supported reliability and medium consistency with RNA data (HPA tissue IHC). RIPK1 has no transmembrane segment (UniProt Q13546 topology).
| Cytoplasmic stain in colon glands (HPA: High) | Expected RIPK1 pattern (HPA: ubiquitous cytoplasmic expression). |
| Nuclear-only stain (HPA: cytosol and plasma membrane) | Unexpected compartment; assess nonspecific staining (HPA subcellular; general IHC practice). |
| Strong stain only in cortex endothelium (HPA: Low) | Unexpected enrichment; check cross-reactivity and endogenous activity (HPA tissue IHC; general IHC practice). |
| Uniform stain over cells and blank areas (general IHC practice) | Suggests background; review blocking and detection controls (general IHC practice). |
| No stain in colon glands (HPA: High) | Check tissue controls and staining steps before calling RIPK1 absent (HPA tissue IHC; general IHC practice). |
| Compartment (UniProt Q13546; HPA subcellular) | Expect cytosol; membrane staining is plausible (UniProt Q13546; HPA subcellular). |
| Tissue contrast (HPA tissue IHC) | Colon glands are High; cortex endothelium is Low (HPA tissue IHC). |
| IHC evidence (HPA antibodies) | HPA015257 and CAB010302 are each Supported for IHC (HPA antibodies). |
| IF/ICC localisation? (HPA subcellular) | Cytosol and plasma membrane are approved locations (HPA ICC-IF). |
| Situation | Likely cause | Next action |
|---|---|---|
| No signal in colon glands (HPA: High) | Staining workflow may have failed (general IHC practice). | Check positive control, retrieval and detection steps (general IHC practice). |
| Nuclear-only signal (HPA subcellular) | Possible nonspecific staining (general IHC practice). | Compare with controls and expected cytosol location (HPA subcellular; general IHC practice). |
| Strong stain in cortex endothelium (HPA: Low) | Possible cross-reactivity or endogenous activity (general IHC practice). | Check negative and detection controls (general IHC practice). |
| Blank areas stain (general IHC practice) | Possible detection background (general IHC practice). | Inspect reagent-only control and washing (general IHC practice). |
| Diffuse stain obscures cells (general IHC practice) | Possible excess primary or inadequate blocking (general IHC practice). | Optimize primary dilution and blocking with controls (general IHC practice). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Supported — Medium consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Appendix | Glandular cells | High | Protein (IHC) | HPA → |
| Colon | Glandular cells | High | Protein (IHC) | HPA → |
| Duodenum | Glandular cells | High | Protein (IHC) | HPA → |
| Gallbladder | Glandular cells | High | Protein (IHC) | HPA → |
| Lung | Alveolar cells type I | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| None in HPA: RIPK1 is detected in all 45 scored tissues. Use a no-primary (secondary-only) and an isotype control instead. | ||||
Troubleshoot chromogenic RIPK1 staining in paraffin sections, with a separate check for IF multiplexing and localisation.
These antibodies have IHC images from human placenta, mouse kidney, rat kidney, and human cervical carcinoma; one also has a mouse kidney IF image (catalog image captions).
A00141 has an IHC-P image from human placenta, while A00141-1 has an IHC-P image from mouse kidney and an IF image from mouse kidney cells (catalog applications; image captions). M00141-3 lists IHC and IF and has IHC images from rat kidney and human cervical carcinoma, although its stated reactivity is Human (catalog applications; image captions; reactivity).
Which to pick: For human paraffin-section IHC, consider A00141, a polyclonal antibody with a human placenta IHC image; its image caption does not report the fixative (catalog dilution text; applications; own IHC caption). For IF/ICC, start with A00141-1 because it lists IF and has a mouse kidney cell IF image (catalog applications; own IF caption). A00141-1 is also the cross-species IHC-P choice because it lists Human, Mouse, and Rat reactivity and shows mouse kidney IHC; its IHC caption does not report the fixative (catalog applications; reactivity; own IHC caption).