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- Table of Contents
Plan SGK1 paraffin-section IHC around the general cytoplasmic tissue pattern (HPA tissue IHC). This guide covers fixation consistency, antibody selection and interpretation of localisation that can change with cell cycle or stimuli (UniProt).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Predominantly cytoplasmic tissue staining (HPA tissue IHC) | |
| Staining pattern | Glandular cells show cytoplasmic staining (HPA tissue IHC) | |
| Antigen retrieval | EDTA pH 8.0 HIER, heat-mediated (datasheet A00673-2) | |
| Positive control | Adrenal gland+4 more · see all | |
| Negative control | Soft tissue |
| Fixation | Keep paraffin-section fixation consistent. (standard IHC practice; not target-specific) | |
| Caveat | Cell cycle and stimuli can shift SGK1 localisation (UniProt) | |
| Regulation | Staining intensity varies by tissue (HPA tissue IHC) | |
| Isoform / epitope | 5 isoforms; check antibody epitope coverage (UniProt) |
The catalog antibody’s IHC-P protocol uses EDTA pH 8.0 retrieval (datasheet A00673-2). The published protocols below cover human paraffin sections and mouse paraffin or frozen sections (PMC6545623; PMC13607775; PMC6877960; PMC10671719).
| Sample | Paraffin-embedded human mammary cancer tissue; fixative not specified (datasheet A00673-2) |
| Fixation | Image fixative and duration unreported (datasheet A00673-2); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: EDTA pH 8.0 (datasheet A00673-2); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A00673-2) |
| Primary antibody | Rabbit anti-SGK1, 0.5-1μg/ml (datasheet A00673-2) |
| Primary incubation | Overnight at 4 °C (datasheet A00673-2) |
| Detection | Streptavidin-biotin complex (SABC), DAB chromogen (datasheet A00673-2) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | SGK1-positive staining in glandular cells of adrenal gland (HPA tissue IHC: High). HPA tissue profile: General cytoplasmic expression. No signal in the no-primary control. |
SGK1 is mainly cytoplasmic in tissue IHC, with High staining reported in glandular, hematopoietic and neuronal cells in selected tissues (HPA tissue IHC). Nuclear or membrane-associated signal can be biologically plausible in context (UniProt O00141 localization). SGK1 has no transmembrane segment (UniProt O00141 topology). HPA rates its tissue IHC profile Approved, while noting low consistency between antibody staining and RNA expression (HPA tissue IHC).
| Granular or diffuse cytoplasmic staining in colon or breast glandular cells. | Consistent with the general cytoplasmic profile and High staining in those cells (HPA tissue IHC). Compare intensity with adjacent tissue and controls (standard IHC practice). |
| Nuclear staining accompanies cytoplasmic staining in otherwise plausible positive cells. | SGK1 can enter the nucleus after phosphorylation or growth factor stimulation (UniProt O00141 localization). Interpret nuclear signal alongside cell context and controls (standard IHC practice). |
| Strong extracellular, luminal or tissue-edge deposit dominates while expected cells remain unstained. | This does not match the intracellular SGK1 locations reported by UniProt (UniProt O00141 localization). Suspect a staining artefact and inspect the negative control (standard IHC practice). |
| Soft-tissue fibroblasts stain strongly while the intended positive cells do not. | HPA reports SGK1 as not detected in soft-tissue fibroblasts (HPA tissue IHC). Check for cross-reactivity or endogenous chromogen activity before calling those cells positive (standard IHC practice). |
| No signal appears in a section expected to contain positive glandular cells. | HPA reports High staining in colon and breast glandular cells (HPA tissue IHC). A negative result there calls for control and detection checks; expression can vary by specimen (standard IHC practice). |
| Tissue and cell type | HPA reports High staining in colon glandular cells and bone-marrow hematopoietic cells, but none in soft-tissue fibroblasts (HPA tissue IHC). Compare like cell types (standard IHC practice). |
| Biological state | SGK1 localization varies with cell cycle, hormones and stress; phosphorylation can favor nuclear localization (UniProt O00141 localization). A nuclear component needs context (standard IHC practice). |
| Antibody evidence | Two listed antibodies have Approved IHC status; HPA also reports low consistency between staining and RNA expression (HPA antibodies; HPA tissue IHC). Treat unexpected patterns cautiously (standard IHC practice). |
| Isoforms and epitope | UniProt lists 5 SGK1 isoforms and a kinase domain at residues 98–355 (UniProt O00141). Without an antibody epitope, isoform coverage cannot be inferred (standard IHC interpretation). |
| Topology and processing | SGK1 has no transmembrane segment, signal peptide, propeptide or reported glycosylation sites (UniProt O00141 topology and processing). Exclusive extracellular or luminal staining needs scrutiny (standard IHC practice). |
| Retrieval and detection | Target-specific fixation effects are not established by the supplied assay evidence. Verify with a matched IHC source before attributing a result to fixation. |
| Situation | Likely cause | Next action |
|---|---|---|
| Known-positive glandular cells show no chromogenic signal. | The run may have inadequate retrieval, primary-antibody exposure or detection (standard IHC practice); colon glandular cells have High reported staining (HPA tissue IHC). | Review the positive control, retrieval, antibody dilution and detection reagents together; change one condition at a time (standard IHC practice). |
| The entire section has diffuse brown background. | Nonspecific binding, incomplete blocking or endogenous detection activity can obscure cellular staining (standard IHC practice). | Inspect a no-primary control; adjust blocking, antibody concentration and washes, then address endogenous activity for the detection chemistry used (standard IHC practice). |
| Staining is confined to lumens or section edges. | This distribution conflicts with reported intracellular SGK1 locations and may reflect trapped reagent or edge artefact (UniProt O00141 localization; standard IHC practice). | Compare intact interior regions with the no-primary control and repeat after checking wash and detection steps (standard IHC practice). |
| Strong staining appears in soft-tissue fibroblasts. | HPA reports SGK1 not detected in those cells; cross-reactivity or endogenous chromogen activity is possible (HPA tissue IHC; standard IHC practice). | Check a no-primary control and cell identity before assigning SGK1 positivity; compare an appropriate positive tissue in the same run (standard IHC practice). |
| Nuclear signal seems inconsistent with cytoplasmic tissue staining. | SGK1 can shuttle into nuclei, while HPA summarizes tissue IHC as generally cytoplasmic (UniProt O00141 localization; HPA tissue IHC). | Score nuclear and cytoplasmic compartments separately and assess cellular context and controls before rejecting the signal (standard IHC practice). |
| IF/ICC shows nuclear speckles: should I expect that pattern in paraffin IHC? | HPA reports enhanced nuclear-speckle localization in ICC-IF, while its tissue IHC summary is generally cytoplasmic (HPA subcellular; HPA tissue IHC). | Use the tissue IHC profile to interpret the paraffin section; assess any nuclear component with cell context and controls (HPA tissue IHC; UniProt O00141 localization; standard IHC practice). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Approved — Low consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adrenal gland | Glandular cells | High | Protein (IHC) | HPA → |
| Appendix | Glandular cells | High | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | High | Protein (IHC) | HPA → |
| Breast | Glandular cells | High | Protein (IHC) | HPA → |
| Cerebellum | Cells in molecular layer | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Soft tissue | Fibroblasts | Not detected | Protein (IHC) | HPA → |
Troubleshoot SGK1 staining in paraffin sections by checking retrieval, cellular compartment, detection background, and matched tissue controls.
Anti-SGK1 IHC images show human mammary, breast and rectal cancer, human stomach, and mouse and rat ovary; IF images show A549 and U20S cells and human stomach (catalog image captions).
A00673-2 is shown on paraffin sections of human mammary cancer, while M00673 is shown on paraffin sections of human breast cancer and mouse and rat ovary (A00673-2 and M00673 IHC captions). A00673 is shown on a paraffin section of human rectal cancer, and A00673-1 is shown on human stomach tissue (A00673 and A00673-1 IHC captions).
Which to pick: For human tissue IHC, choose A00673-2 for mammary cancer at 1 μg/mL, A00673 for rectal cancer at 1 μg/mL, or A00673-1 for stomach tissue at 5 μg/mL, using each antibody’s own IHC image as the starting point (respective IHC captions). For IF/ICC, A00673-2 has an A549 cell image at 4 μg/mL and A00673 has a U20S cell image at 2 μg/mL; A00673-1 has an IF image of human stomach at 20 μg/mL (catalog applications; respective IF captions). For cross-species tissue IHC, choose rabbit monoclonal M00673, clone EHF-19: its IHC images include human breast cancer and mouse and rat ovary at 1:50 (catalog clone and reactivity; M00673 IHC captions); the fixative is unreported in the IHC captions for all four antibodies (catalog IHC captions).