SI · Western blot design guide

SI Western Blot Planning Guide

Plan a SI Western blot around the catalog-observed 209.5 kDa band, image-backed A04542-1 evidence, HPA controls, and verified protocol records.

Evidence assembled July 2026 · For research use; verify linked source records and product datasheet before use
Western blot protocol sheet for SI (SI): expected band 209.5 kDa, antibody A04542-1, and guide-derived SDS-PAGE protocol steps
SI Western blot protocol sheet — expected band 209.5 kDa, antibody A04542-1, controls and PMC citations. Open the full SI WB guide →

SI Western Blot Experimental Design Guide

Expected bands, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.

Must know before running
Expected band 209.5 kDa
Observed band Not reported — verify product WB image
Gel 4-12% gradient
Positive control ⓘ Small intestine
Negative control ⓘ Bone marrow
Important caveats
Reasons your observed band may differ from the expected size.
ⓘ Calculated mass 209.5 kDa
ⓘ Localization Apical cell membrane
ⓘ Processing / PTM Record-dependent
ⓘ Reactivity Human / Mouse / Rat
Section 1

Real Curated SI Western Blot Protocols

Start with the molecular-weight rule, then compare verified publication-derived conditions.

Recommended Western blot protocol parameters
Sample / lysateDuodenum
Gel %4-12% gradient
Load20-30 µg total protein per lane
TransferWet/tank, extended transfer
Membrane0.45 µm PVDF
Blocking5% non-fat milk or 5% BSA in TBST
PrimaryA04542-1 at datasheet starting dilution
Primary incubationOvernight at 4 °C with gentle agitation
SecondarySpecies-matched HRP conjugate at validated dilution
Wash3 × 5 min in TBST
DetectionChemiluminescent substrate
ExposureBracket exposures to avoid saturation
Section 2

What Is the Expected SI Western Blot Band Size?

Use the product-observed 209.5 kDa band as the primary planning value and retain the UniProt calculated mass as context.

What am I looking at on my blot?
209.5 kDaMatches the authoritative product WB observation.
209.5 kDa calculatedUse as UniProt context, not as a replacement observed band.
Unexpected additional signalDo not assign identity without orthogonal positive/negative controls.
💡Expected SI appearancePlan around 209.5 kDa and keep the calculated mass as supporting context.
How each factor affects band size
Catalog-observed band209.5 kDa; use this as the primary experimental expectation.
Calculated mass209.5 kDa from UniProt P14410; retain as context.
Gel selection4-12% gradient; shared with the recommended protocol and poster.
Specificity checkCompare the lead HPA positive and negative controls with A04542-1.
Why is my band missing or off?
SituationLikely causeNext action
209.5 kDaMatches the authoritative product WB observation.Confirm with orthogonal controls and the linked product record.
Additional bandMay reflect processing, modification, or non-specific signal.Run a dilution series and compare positive/negative controls.
Weak signalTarget abundance or transfer may be limiting.Verify transfer, increase positive-control abundance, and bracket exposure.

Sample controls for SI Western blot

🧪Use Small intestine as the first positive-control candidate and Bone marrow as the HPA Not detected negative candidate.
Positive control: Small intestine (High)
Negative control: Bone marrow (Not detected)
HPA protein score determines control status; other expression data is supporting context only.

HPA tissue expression evidence for SI

Comprehensive Human Protein Atlas IHC scoring per tissue. Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.

Positive expression · recommended positive controls

TissueCell typeLevelEvidenceSource
Small intestine Reported tissue cells High Protein (HPA) HPA →
Duodenum Reported tissue cells High Protein (HPA) HPA →
Appendix Reported tissue cells Medium Protein (HPA) HPA →

Undetected expression · recommended negative controls

TissueCell typeLevelEvidenceSource
Bone marrow Reported tissue cells Not detected Protein (HPA) HPA →
Breast Reported tissue cells Not detected Protein (HPA) HPA →
Section 3

Advanced SI Western Blot Tips

Deeper troubleshooting and optimisation questions for SI, answered from its protein features.

Which band should guide the blot?
Use 209.5 kDa, the observation attached to the authoritative A04542-1 WB record.
How should calculated mass be interpreted?
Treat the UniProt calculated mass as context; it does not replace the catalog-observed 209.5 kDa expectation.
Which positive control should I start with?
Start with Small intestine, the lead HPA protein-expression candidate.
Which negative control is defensible?
Use Bone marrow as an orthogonal HPA Not detected candidate.
Which gel should I use?
Use 4-12% gradient consistently across the quick facts, protocol table, and poster.
What transfer method to use for SI Western blot?
Use the transfer method in the recommended protocol and verify transfer before blocking.
How should A04542-1 be started?
Start at the linked datasheet condition and run a three-point primary-antibody dilution test.
Which publication-derived protocols can I compare?
No verified publication protocol was supplied; use only the deterministic recommended protocol.
Boster reagents

SI Western Blot Reagents

Human/Mouse/Rat-reactive SI Western blot reagents with authoritative product imagery.

Real WB data Western blot validation image for SI using A04542-1; observed band 209.5 kDa
Anti-SI Antibody Picoband®
Cat # A04542-1

Only image-backed, WB-validated Human/Mouse/Rat recommendations from the prepared catalog evidence are shown.

Source: prepared picoband-wb product evidence; each card retains its own SKU, URL, observed band, and authoritative WB image.

References

  1. UniProt P14410
  2. Human Protein Atlas — SI
  3. A04542-1 product record
  4. PMC6123821 — Schlafen 12 Interaction with SerpinB12 and Deubiquitylases Drives Human Enterocyte Differentiation (Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology, 2018)