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- Table of Contents
Plan chromogenic paraffin IHC for SLC5A2 using the membranous staining of kidney proximal-tubule microvilli as the expected pattern (HPA tissue IHC). A catalog antibody has a kidney-section IHC example at 1 μg/mL with DAB detection (datasheet A03748-1).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Proximal-tubule microvilli membrane (HPA tissue IHC) | |
| Staining pattern | Membranous staining of kidney proximal-tubule microvilli (HPA tissue IHC) | |
| Antigen retrieval | Citrate pH 6 HIER, heat-mediated (datasheet A03748-1) | |
| Positive control | Kidney | |
| Negative control | Adipose tissue+4 more · see all |
| Fixation | Keep fixation consistent across paraffin sections. (standard IHC practice; not target-specific) | |
| Caveat | Endogenous renal biotin may mimic SABC signal (standard IHC practice; datasheet A03748-1 detection) | |
| Regulation | No expression regulator annotated (UniProt) | |
| Isoform / epitope | 2 isoforms; epitope map unknown; extracellular versus cytoplasmic location matters (UniProt) |
The catalog antibody has a datasheet IHC-P protocol (datasheet A03748-1); the published options below report SLC5A2 staining conditions from three PMC articles (PMC8720966; PMC7587001; PMC10599739).
| Sample | Paraffin-embedded human renal cancer tissues; fixative not specified (datasheet A03748-1) |
| Fixation | Image fixative and duration unreported (datasheet A03748-1); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: Citrate pH 6, 20 min (datasheet A03748-1) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A03748-1) |
| Primary antibody | Rabbit anti-SLC5A2, 0.5-1μg/ml (datasheet A03748-1) |
| Primary incubation | Overnight at 4 °C (datasheet A03748-1) |
| Detection | Streptavidin-biotin complex (SABC), DAB chromogen (datasheet A03748-1) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | SLC5A2-positive staining in proximal tubules (microvilli) of kidney (HPA tissue IHC: High). HPA tissue profile: Membranous expression in proximal tubules in kidney. No signal in the no-primary control. |
SLC5A2 should appear at the apical membrane of kidney proximal tubules, where the luminal microvilli stain strongly (UniProt P31639: apical cell membrane; HPA tissue IHC: High in proximal tubule microvilli). Its 14 transmembrane segments support a membrane pattern (UniProt P31639 topology). HPA rates the kidney IHC pattern Enhanced, citing consistency between antibody staining and RNA expression (HPA tissue IHC: Enhanced).
| Strong, narrow staining along the luminal edge of kidney proximal tubules (HPA tissue IHC: High in proximal tubule microvilli). | This fits the expected apical, membranous pattern (UniProt P31639: apical cell membrane; HPA tissue IHC: membranous proximal tubule expression). In chromogenic IHC, score the luminal rim and the cells carrying it; do not require individual microvilli to be resolved (general IHC practice). |
| Predominantly nuclear, diffuse cytoplasmic, or basolateral staining in proximal tubules (relative to UniProt P31639: apical cell membrane). | A dominant signal outside the expected apical rim does not match the reported localisation (UniProt P31639: apical cell membrane; HPA tissue IHC: proximal tubule microvilli). Check whether the signal follows tissue structures consistently, then compare it with an appropriate negative control (general IHC practice). |
| Strong staining in unrelated cells, such as adipocytes or adrenal glandular cells (HPA tissue IHC: Not detected in these cells). | These cells are useful comparators, but an HPA 'Not detected' result is not proof of universal absence (HPA tissue IHC). Consider cross-reactivity or endogenous detection activity; inspect the negative controls before assigning the signal to SLC5A2 (general IHC practice). |
| Broad colour across tissue and empty spaces, without a clear proximal tubule luminal rim (relative to HPA tissue IHC: proximal tubule microvilli). | This is poorly resolved background rather than the reported selective membrane pattern (HPA tissue IHC: membranous proximal tubule expression). Review the no-primary control, blocking and wash conditions, and detection development (general IHC practice). |
| No visible luminal signal in an adequately sampled kidney section (HPA tissue IHC: High in proximal tubule microvilli). | The expected positive compartment is missing (UniProt P31639: apical cell membrane; HPA tissue IHC: High in proximal tubule microvilli). Confirm proximal tubules are present and review the IHC workflow and positive control before interpreting other tissues as negative (general IHC practice). |
| Anatomic compartment (HPA tissue IHC; UniProt P31639). | Use the proximal tubule luminal border as the scoring landmark: HPA reports membranous staining of microvilli, consistent with UniProt's apical membrane assignment (HPA tissue IHC; UniProt P31639: apical cell membrane). |
| Tissue comparators (HPA tissue IHC). | Kidney is the documented High comparator; testis cells in seminiferous ducts are reported Low, while the listed adipocytes and adrenal glandular cells are Not detected (HPA tissue IHC). Treat each result as a reported staining level, not a universal rule for every specimen (HPA tissue IHC). |
| IHC validation (HPA antibody record; HPA tissue IHC). | HPA lists HPA041603 as IHC Enhanced and describes the tissue pattern as consistent with RNA expression (HPA antibody record: IHC Enhanced; HPA tissue IHC: Enhanced). That supports the reported pattern; a new antibody or local workflow still needs its own controls (general IHC practice). |
| Membrane topology and unknown epitope (UniProt P31639 topology). | SLC5A2 has 14 transmembrane segments and extracellular and cytoplasmic regions (UniProt P31639 topology). No antibody epitope is supplied, so topology alone cannot justify a specific antigen retrieval or permeabilisation setting (UniProt P31639 topology; supplied antibody record). |
| Isoforms and processing (UniProt P31639). | UniProt lists 2 isoforms and a chain spanning residues 1–672, with no annotated signal peptide or propeptide (UniProt P31639). Without an epitope or isoform-specific staining record, the slide cannot distinguish isoforms or support a processing explanation (UniProt P31639; HPA tissue IHC). |
| IF/ICC? (HPA subcellular; HPA antibody record). | HPA gives a general Membrane summary but no main location or ICC-IF image cell lines, and the supplied antibody record has no ICC validation entry (HPA subcellular; HPA antibody record). The IHC proximal tubule pattern does not establish an IF/ICC result (HPA tissue IHC; HPA subcellular). |
| Situation | Likely cause | Next action |
|---|---|---|
| Kidney positive control has no apical rim (HPA tissue IHC: High in proximal tubule microvilli). | The section may lack identifiable proximal tubules, or the staining workflow may have failed (general IHC practice); the image alone cannot identify which. | Confirm proximal tubules on the counterstained section, then check antibody application, retrieval, detection and a working positive control (general IHC practice). Avoid calling other tissue negative until the control works. |
| Signal is chiefly nuclear or basolateral (relative to UniProt P31639: apical cell membrane). | The pattern conflicts with the reported apical localisation (UniProt P31639; HPA tissue IHC). Its cause cannot be assigned from localisation alone. | Recheck compartment boundaries and compare no-primary and tissue controls; score only a reproducible apical proximal tubule pattern as expected SLC5A2 staining (general IHC practice; HPA tissue IHC). |
| Adipocytes or adrenal glandular cells stain strongly (HPA tissue IHC: Not detected in these cells). | Cross-reactivity or endogenous detection activity is possible (general IHC practice); HPA's negative report alone cannot identify the cause (HPA tissue IHC). | Compare a no-primary control and an appropriate negative tissue, then review blocking and detection chemistry (general IHC practice). Keep the unexpected cells separate from the kidney positive score (HPA tissue IHC). |
| Diffuse deposit obscures the luminal edge (relative to HPA tissue IHC: proximal tubule microvilli). | Nonspecific background or overdeveloped chromogen can obscure membrane detail (general IHC practice). | Review the no-primary control, washes, blocking, primary concentration and development time, changing one workflow variable at a time (general IHC practice). Reassess whether a distinct apical rim remains (HPA tissue IHC). |
| Weak testis staining is treated as a failed negative control (HPA tissue IHC: Low in cells of seminiferous ducts). | Testis is reported Low rather than Not detected in the supplied tissue profile (HPA tissue IHC). | Use a reported Not detected cell type for a tissue comparison and keep the kidney proximal tubule as the positive reference (HPA tissue IHC). Interpret weak testis staining against local controls (general IHC practice). |
| An IF/ICC image is used to claim a validated cell-line pattern (HPA subcellular: no ICC-IF image cell lines). | The supplied HPA summary says Membrane but provides no main location or ICC-IF image cell lines; HPA041603 has no ICC validation entry here (HPA subcellular; HPA antibody record). | Report the IF/ICC observation as an observation requiring its own controls (general IF practice). Use the IHC kidney result only as tissue-pattern context (HPA tissue IHC). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Enhanced — High consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Kidney | Proximal tubules (microvilli) | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Adrenal gland | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Appendix | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | Not detected | Protein (IHC) | HPA → |
| Breast | Adipocytes | Not detected | Protein (IHC) | HPA → |
Troubleshoot SLC5A2 staining in paraffin sections by checking retrieval, membrane localisation, controls and scoring against the expected proximal tubule pattern (HPA tissue IHC; UniProt P31639).
Both antibodies have IHC images from human paraffin sections; A03748-1 also has mouse and rat kidney images (catalog IHC captions). ICC is listed for A03748-1, but no IF image is supplied (catalog applications and images).
A03748 will render with its human colon cancer paraffin-section IHC image; its listed reactivity is human, mouse and rat (A03748 image caption and reactivity). A03748-1 will render with its human renal cancer paraffin-section IHC image; additional captions show mouse and rat kidney sections (A03748-1 IHC captions).
Which to pick: For tissue IHC, choose A03748-1 when kidney evidence or cross-species images matter; its captions show human renal cancer and mouse and rat kidney paraffin sections, while the polyclonal A03748 has a human colon cancer paraffin-section image (catalog IHC captions; A03748 dilution_raw). For IF/ICC work, A03748-1 lists ICC at 0.5–1 μg/ml, but supplies no IF image; A03748 does not list ICC or IF (catalog applications, dilutions and images). The IHC captions specify paraffin sections but do not report the fixative for either SKU (catalog IHC captions).