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- Table of Contents
Plan SPA17 IHC on paraffin sections with spermatids or ciliated cells as positive comparators (HPA tissue IHC). This guide covers fixation consistency, the 2–5 μg/ml antibody range (datasheet A07969), and interpretation of cytoplasmic and membranous staining (HPA tissue IHC).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Cytoplasmic and membranous in seminiferous duct cells and motile cilia (HPA tissue IHC) | |
| Staining pattern | Seminiferous duct cells: cytoplasmic/membranous; motile cilia (HPA tissue IHC) | |
| Antigen retrieval | EDTA pH 8.0 HIER, heat-mediated (datasheet A07969) | |
| Positive control | Bronchus+4 more · see all | |
| Negative control | Adipose tissue+4 more · see all |
| Fixation | Keep fixation consistent across sections. (standard IHC practice; not target-specific) | |
| Caveat | Presumed off-target binding may mimic SPA17 staining (HPA tissue IHC) | |
| Regulation | Tissue-enhanced RNA in testis and Fallopian tube (HPA tissue RNA) | |
| Isoform / epitope | No isoforms; full-length chain, epitope side unresolved (UniProt) |
The catalog antibody protocol is paired with one published chromogenic IHC protocol for SP17 staining in Merkel cell carcinoma sections (PMC8130841).
| Sample | Paraffin-embedded human placenta tissue; fixative not specified (datasheet A07969) |
| Fixation | Image fixative and duration unreported (datasheet A07969); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: EDTA pH 8.0 (datasheet A07969); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A07969) |
| Primary antibody | Rabbit anti-SPA17, 2-5 μg/ml (datasheet A07969) |
| Primary incubation | Overnight at 4 °C (datasheet A07969) |
| Detection | HRP-conjugated secondary, DAB chromogen (datasheet A07969) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | SPA17-positive staining in ciliated cells (cilia axoneme) of bronchus (HPA tissue IHC: High). HPA tissue profile: Cytoplasmic and membranous expression in cells of seminiferous ducts and in motile cilia. No signal in the no-primary control. |
In paraffin-section IHC, expect SPA17 in late spermatids and along motile cilia, with cytoplasmic and membranous staining in seminiferous ducts (HPA: tissue IHC, Enhanced). UniProt describes SPA17 as membrane-associated despite reporting no transmembrane segment (UniProt Q15506: subcellular location and topology). HPA reports medium agreement between staining and RNA data and notes presumed off-target binding that was disregarded (HPA: reliability description).
| Strong staining in elongated or late spermatids, or along cilia in bronchus, nasopharynx, or fallopian tube (HPA: tissue IHC). | This matches HPA's High staining in those cells. Assess the relevant cells and structures, since HPA describes a cytoplasmic and membranous pattern in seminiferous ducts and motile cilia (HPA: tissue IHC). |
| A predominantly nuclear signal replaces the expected spermatid or ciliary pattern (HPA: tissue IHC). | Nuclear staining is outside the supplied HPA tissue profile and UniProt membrane annotation (HPA: tissue IHC; UniProt Q15506: subcellular location). Treat it as suspect until controls support specificity; review counterstain and detection controls (general IHC practice). |
| Strong signal appears in adipocytes of adipose tissue or glandular cells of adrenal gland (HPA: Not detected in those cells). | These are discordant cell-level results, not automatic proof of SPA17 expression. Check antibody-dependent staining and endogenous detection activity with appropriate controls (general IHC practice); HPA notes presumed off-target binding in its tissue assessment (HPA: reliability description). |
| Diffuse colour covers tissue and obscures cell boundaries or cilia (general IHC observation). | A diffuse field cannot establish the cell-restricted pattern described by HPA (HPA: tissue IHC). Compare a no-primary control and review blocking, washing, and detection exposure as general IHC workflow checks; the supplied sources do not identify a SPA17-specific cause. |
| No staining is visible in late spermatids or ciliated bronchial epithelium (HPA: High in those cells). | The expected positive reference has failed, so a negative test section is hard to interpret. Confirm that the reference contains the stated cells, then check the antibody's IHC conditions and detection controls (general IHC practice). HPA levels do not diagnose the failure. |
| Cell identity in the section | HPA reports High staining in elongated or late spermatids and ciliated cells of bronchus, nasopharynx, and fallopian tube (HPA: tissue IHC). Score those cells specifically; a section lacking them cannot serve as the same positive reference (general IHC interpretation). |
| Tissue-dependent expression | Kidney glomerular cells are High, while endometrial and epididymal glandular cells are Medium (HPA: tissue IHC). Use each tissue's stated cell population and level when comparing sections; a single intensity threshold across these tissues would ignore the reported differences. |
| Antibody evidence and limits | HPA lists HPA037568 as IHC Enhanced and its overall tissue reliability as Enhanced, while describing medium agreement with RNA and disregarded presumed off-target binding (HPA: antibody validation and reliability description). Interpret isolated unexpected staining cautiously. |
| Topology and processing | SPA17 is annotated as membrane-associated, with no transmembrane segment, signal peptide, propeptide, or listed glycosylation sites; the recorded chain spans residues 1–151 (UniProt Q15506). These annotations alone do not predict antigen retrieval requirements or fixation sensitivity. |
| IF/ICC Q&A: Where is SPA17 reported? | HPA reports Golgi apparatus and sperm principal piece as approved main locations, with vesicles as an additional approved location (HPA: subcellular ICC-IF). These IF observations provide context; they are not a paraffin-section IHC protocol or a substitute for the tissue pattern. |
| Situation | Likely cause | Next action |
|---|---|---|
| The positive testis section appears negative (HPA: High in elongated or late spermatids). | The examined field may lack the relevant spermatids, or the IHC detection workflow may have failed (general IHC practice). The HPA pattern alone cannot distinguish these causes. | Verify the cell population on the counterstained section, then check an established positive control and the IHC-validated antibody's stated conditions (general IHC practice). |
| Cilia look negative, but nearby respiratory cells stain (HPA: High in bronchial and nasopharyngeal cilia). | The signal may be assigned to the wrong structure, or it may be nonspecific; HPA identifies the cilia axoneme as the High-staining site (HPA: tissue IHC). | Inspect well-preserved ciliated borders at higher magnification and compare controls before scoring the respiratory signal as SPA17 (general IHC practice). |
| Adipose adipocytes or adrenal glandular cells stain strongly (HPA: Not detected in those cells). | This conflicts with HPA's reported negatives. Antibody cross-reactivity or endogenous detection activity is possible (general IHC practice); HPA also notes presumed off-target binding (HPA: reliability description). | Compare a no-primary control and a tissue positive reference, then reassess cell identity and the staining pattern (general IHC practice). |
| Colour is diffuse across the section and the expected structures are hard to distinguish (general IHC observation). | Background from the detection workflow is possible (general IHC practice). Neither HPA nor UniProt identifies a SPA17-specific mechanism for diffuse colour. | Check the no-primary control and review blocking, washing, and detection development against the laboratory's IHC procedure (general IHC practice). |
| Only nuclei stain in an otherwise readable section (general IHC observation). | A nuclear-only result does not match HPA's cytoplasmic, membranous, and ciliary tissue profile or UniProt's membrane annotation (HPA: tissue IHC; UniProt Q15506: subcellular location). | Recheck the counterstain and negative control, then compare a known positive tissue before assigning the nuclear signal to SPA17 (general IHC practice). |
| A weak or negative result is attributed to fixation or antigen retrieval (general IHC interpretation). | The supplied HPA and UniProt records give no SPA17-specific fixation sensitivity or retrieval requirement. HPA staining levels and UniProt topology do not establish either effect. | Report the observed result and controls. If troubleshooting the workflow, follow the IHC-validated antibody's documented conditions; do not infer a SPA17-specific fixation mechanism from these sources. |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Enhanced — Medium consistency between antibody staining and RNA expression data. Presumed off target binding observed and disregarded. Protein expression in respiratory epithelia can be correlated with lung RNA-seq data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Bronchus | Ciliated cells (cilia axoneme) | High | Protein (IHC) | HPA → |
| Fallopian tube | Ciliated cells (cilia axoneme) | High | Protein (IHC) | HPA → |
| Kidney | Cells in glomeruli | High | Protein (IHC) | HPA → |
| Nasopharynx | Ciliated cells (cilia axoneme) | High | Protein (IHC) | HPA → |
| Testis | Elongated or late spermatids | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Adrenal gland | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | Not detected | Protein (IHC) | HPA → |
| Breast | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Caudate | Glial cells | Not detected | Protein (IHC) | HPA → |
Troubleshoot SPA17 staining in paraffin sections by checking retrieval, controls, cellular localisation and scoring before interpreting chromogenic signal.
A07969 has IHC images from human paraffin sections of placenta and rectum adenocarcinoma, plus IF images from human cervical cancer and ovarian sections (A07969 image captions).
A07969 is listed for IHC and IF, with human, mouse and rat reactivity (catalog applications and reactivity). Its IHC images show human placenta and rectum adenocarcinoma; its IF images show human cervical cancer and ovarian tissue (A07969 image captions).
Which to pick: For tissue IHC, choose A07969: its paraffin-section images used EDTA retrieval at pH 8.0 and 2 μg/ml primary antibody; the fixative is unreported (A07969 IHC captions). For IF, A07969 has human tissue images at 5 μg/ml; ICC validation is not listed (A07969 IF captions; catalog applications). For cross-species IHC, A07969 lists human, mouse and rat reactivity, though its supplied IHC images show human tissue only; it is rabbit-hosted, and clonality is unreported (catalog host and reactivity; A07969 IHC captions).