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Plan TFRC IHC in paraffin sections using placental trophoblasts or bone marrow hematopoietic cells as strong staining examples (HPA tissue IHC). Assess membranous and cytoplasmic signal, and consider the secreted serum form when interpreting it (HPA tissue IHC; UniProt).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Cytoplasmic and membranous tissue staining (HPA tissue IHC) | |
| Staining pattern | Strong membrane and cytoplasmic staining in trophoblasts and marrow cells (HPA tissue IHC) | |
| Antigen retrieval | Citrate pH 6 HIER, heat-mediated (datasheet PB9233) | |
| Positive control | Bone marrow+4 more · see all | |
| Negative control | Adipose tissue+4 more · see all |
| Fixation | Keep fixation consistent across paraffin sections. (standard IHC practice; not target-specific) | |
| Caveat | A secreted serum form may affect interpretation of tissue staining (UniProt) | |
| Regulation | Expression regulators are not specified (UniProt) | |
| Isoform / epitope | No isoforms listed; serum form 101–760 lacks the cytoplasmic tail (UniProt) |
Compare the catalog antibody’s IHC-P protocol with two published TFRC staining protocols (PMC11045412; PMC11379720).
| Sample | Paraffin-embedded human placenta tissue; fixative not specified (datasheet PB9233) |
| Fixation | Image fixative and duration unreported (datasheet PB9233); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: Citrate pH 6, 20 min (datasheet PB9233) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet PB9233) |
| Primary antibody | Rabbit anti-TFRC, 0.5-1μg/ml (datasheet PB9233) |
| Primary incubation | Overnight at 4 °C (datasheet PB9233) |
| Detection | Streptavidin-biotin complex (SABC), DAB chromogen (datasheet PB9233) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | TFRC-positive staining in hematopoietic cells of bone marrow (HPA tissue IHC: High). HPA tissue profile: Cytoplasmic and membranous expression in most tissues, highly abundant in placental trophoblasts and bone marrow cells. No signal in the no-primary control. |
TFRC staining should be mainly membranous and cytoplasmic in paraffin sections, with strong signal in placental trophoblasts, bone marrow hematopoietic cells, and lung macrophages (HPA tissue IHC: Enhanced reliability; High in these cells). Its membrane distribution fits a receptor with a cytoplasmic segment and extracellular domain (UniProt P02786 topology). HPA also reports endosomal and lysosomal localisation by ICC-IF (HPA subcellular).
| Strong membrane-associated staining with cytoplasmic signal in placental trophoblasts. | This matches a high-expression cell population and the broader membranous and cytoplasmic tissue pattern (HPA tissue IHC: High in trophoblasts; Enhanced reliability). Score the trophoblasts themselves rather than assigning their signal to every cell in the section (HPA tissue IHC: cell-specific result). |
| Strong staining in bone marrow hematopoietic cells or lung macrophages. | These are additional high-expression populations for judging whether the stain reaches expected positive cells (HPA tissue IHC: High in hematopoietic cells and macrophages). Compare the relevant cells within each tissue; HPA's rating describes those cells, not uniform staining across the whole section (HPA tissue IHC: cell-specific levels). |
| Predominantly nuclear staining, without a convincing membrane or cytoplasmic pattern. | Treat this as a localisation mismatch requiring review, rather than calling it TFRC-positive: HPA describes membranous and cytoplasmic tissue staining, and UniProt places TFRC at the cell membrane (HPA tissue IHC; UniProt P02786 subcellular location). Check morphology and staining controls before attributing it to artefact (general IHC practice). |
| Strong staining in adipocytes, skeletal muscle myocytes, or thyroid glandular cells. | These cells are reported as not detected, so strong signal warrants investigation for cross-reactivity or endogenous detection activity (HPA tissue IHC: Not detected in these cells; general IHC practice). A discordant result alone does not identify the cause; compare cell identity, the detection-only control, and the expected positive population (general IHC practice). |
| Diffuse stain across cells and extracellular spaces, obscuring cell boundaries. | The distribution is difficult to score against HPA's cell-specific membranous and cytoplasmic pattern (HPA tissue IHC). Diffuse background can arise from the staining workflow; evaluate a detection-only control and whether expected positive cells remain distinguishable (general IHC practice). UniProt lists a secreted serum form, but this appearance alone does not establish shedding (UniProt P02786 processing). |
| Cell-specific tissue distribution | HPA rates trophoblasts, marrow hematopoietic cells, and lung macrophages High, while adipocytes and skeletal muscle myocytes are Not detected (HPA tissue IHC). Interpret intensity in the named cell population, because neighboring cells may have different expression (HPA tissue IHC: cell-specific ratings). |
| Membrane topology and intracellular localisation | TFRC has a cytoplasmic segment at residues 1–67, a transmembrane segment at 68–88, and an extracellular region at 89–760 (UniProt P02786 topology). HPA tissue IHC reports membrane and cytoplasmic staining; ICC-IF supports endosomal and lysosomal localisation (HPA tissue IHC; HPA subcellular). |
| Processed serum form | UniProt lists full-length TFRC at residues 1–760 and a serum form at 101–760 (UniProt P02786 processing). This supports caution when interpreting diffuse extracellular signal, but the supplied records do not establish that a particular IHC stain detects the serum form or identify its epitope (UniProt P02786 processing). |
| Strength and scope of validation | HPA assigns Enhanced tissue-IHC reliability and lists two antibodies with Enhanced IHC status (HPA tissue IHC; HPA antibodies: HPA028598, CAB000153). The tissue profile also notes only medium consistency between staining and RNA, with secreted protein complicating their correspondence (HPA tissue IHC: reliability description). |
| IF/ICC localisation Q&A | What should IF/ICC show? Mainly endosomes and lysosomes in the HPA subcellular record (HPA subcellular: supported locations). That result comes from ICC-IF and does not replace the membranous and cytoplasmic appearance used to interpret paraffin-section IHC (HPA subcellular; HPA tissue IHC). |
| Situation | Likely cause | Next action |
|---|---|---|
| No stain in a placental trophoblast or marrow hematopoietic-cell positive control. | The expected high-expression cells have not been demonstrated; the record alone cannot distinguish tissue selection from a failed staining run (HPA tissue IHC: High in these cells). | Target-specific fixation effects are not established by the supplied assay evidence. Verify with a matched IHC source before attributing a result to fixation. |
| Only faint signal in a tissue chosen as a positive control. | The sampled cells may have a lower HPA rating: hepatocytes and small-intestine glandular cells are Low, while several other glandular populations are Medium (HPA tissue IHC). | Judge intensity against the named cell type and include a High-rated positive population when available (HPA tissue IHC: tissue levels). Review section and detection quality before interpreting faint staining as TFRC loss (general IHC practice). |
| Strong staining in an HPA Not detected cell population. | Cell identification, antibody cross-reactivity, or endogenous detection activity may account for the discrepancy; HPA's negative call alone cannot separate them (HPA tissue IHC: Not detected; general IHC practice). | Recheck cell identity and compare a detection-only control with a known-positive population in the same run (general IHC practice; HPA tissue IHC: High-positive populations). |
| Predominantly nuclear or structureless cytoplasmic signal. | This conflicts with the reported tissue pattern and membrane topology; the image does not by itself establish an artefact mechanism (HPA tissue IHC: membranous and cytoplasmic; UniProt P02786 topology). | Inspect morphology, compare the expected positive-cell distribution, and review control staining before scoring the signal as TFRC (general IHC practice; HPA tissue IHC). |
| Diffuse chromogen obscures otherwise expected positive cells. | Background may prevent a reliable cell-specific readout; a secreted serum form is annotated, but its detection in this section is unproven (HPA tissue IHC; UniProt P02786 processing). | Compare detection-only controls and review blocking, washing, and chromogen development as general IHC checks (general IHC practice). Score only interpretable cell-associated staining against the HPA pattern (HPA tissue IHC). |
| IF/ICC puncta seem inconsistent with membrane staining in IHC. | HPA supports endosomal and lysosomal ICC-IF localisation, whereas its tissue-IHC profile describes membranous and cytoplasmic expression (HPA subcellular; HPA tissue IHC). | Interpret each image against its own application's reported pattern and controls (HPA subcellular; HPA tissue IHC; general IHC/IF practice). The supplied records do not establish that the two preparations must show identical visual detail. |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Enhanced — Medium consistency between antibody staining and RNA expression data. At least one protein variant secreted, tissue location of RNA and protein might differ and correlation is complex.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Bone marrow | Hematopoietic cells | High | Protein (IHC) | HPA → |
| Lung | Macrophages | High | Protein (IHC) | HPA → |
| Placenta | Trophoblastic cells | High | Protein (IHC) | HPA → |
| Adrenal gland | Glandular cells | Medium | Protein (IHC) | HPA → |
| Appendix | Glandular cells | Medium | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Salivary gland | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Seminal vesicle | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Skeletal muscle | Myocytes | Not detected | Protein (IHC) | HPA → |
| Spleen | Cells in red pulp | Not detected | Protein (IHC) | HPA → |
Troubleshoot TFRC staining in paraffin sections by checking retrieval, cellular distribution, controls, and scoring before interpreting chromogenic signal.
The catalog includes anti-TFRC antibodies with IHC images of human placenta, kidney, and brain, plus IF examples in A431 cells and human placenta (IHC/IF image captions).
PB9233 and M00591-1 show paraffin-section IHC in human placenta (IHC image captions). M00591-4 shows IHC in human placenta and human, mouse, and rat kidney; A00591S24 shows phospho-Ser24 IHC in paraffin-embedded human brain with peptide blocking (IHC image captions).
Which to pick: For paraffin-section tissue IHC, PB9233 has a human placenta example using citrate retrieval at pH 6 for 20 minutes; M00591-1 has a human placenta example using EDTA retrieval at pH 8.0 (IHC image captions). For IF/ICC, choose PB9233, which lists both applications and has A431 cell and human placenta IF examples (catalog applications; IF image captions). For IHC across species, M00591-4 is a rabbit monoclonal with kidney images from human, mouse, and rat; the fixative is unreported in those captions (catalog antibody description; IHC image captions).