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- Table of Contents
Plan chromogenic CASP1 IHC on paraffin sections using lung macrophages or small-intestinal glandular cells as positive references (HPA tissue IHC). Interpret predominantly cytoplasmic staining (HPA tissue IHC) with attention to CASP1 cleavage and the antibody’s epitope region (UniProt).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Predominantly cytoplasmic; occasional nuclear staining (HPA tissue IHC) | |
| Staining pattern | Lung macrophages and intestinal glands: cytoplasmic, sometimes nuclear (HPA tissue IHC) | |
| Antigen retrieval | Citrate pH 6.0 HIER, 95–98 °C, 20 min (rule: cytoplasmic / membrane antigen) | |
| Positive control | Duodenum+4 more · see all | |
| Negative control | Adipose tissue+4 more · see all |
| Fixation | Keep formalin fixation consistent across sections (standard IHC practice; not target-specific); Matched tissue-IHC evidence does not establish the fixation claim. Validate the specimen-specific method before use. (selected-SKU IHC image M00048-3) | |
| Caveat | Activation cleaves CASP1, so epitope position may affect staining (UniProt) | |
| Regulation | Inflammasomes activate CASP1 (UniProt) | |
| Isoform / epitope | 5 isoforms; cleavage yields p20 and p10, so epitope region matters (UniProt) |
Compare the catalog antibody’s IHC-P protocol with four published CASP1 IHC methods (PMC9174061; PMC5503597; PMC7202523; PMC9663582).
| Sample | Tissue sections; selected-image fixative not specified (standard IHC workflow) |
| Fixation | Image fixative and duration unreported (datasheet M00048-3); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat-induced epitope retrieval in citrate buffer, pH 6.0, 20 min at 95–98 °C (standard rule: cytoplasmic / membrane antigen) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% normal serum of the secondary host, 30 min, room temperature (standard) |
| Primary antibody | Rabbit anti-CASP1, 1:200-1:1000 (datasheet M00048-3) |
| Primary incubation | Overnight at 4 °C (standard) |
| Detection | HRP-polymer secondary, DAB chromogen 5–10 min (standard) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | CASP1-positive staining in glandular cells of duodenum (HPA tissue IHC: High). HPA tissue profile: Ubiquitous cytoplasmic expression with varying intensity that in cases was combined with nuclear expression. No signal in the no-primary control. |
CASP1 stains cytoplasm in lung macrophages and gut glands (HPA: Approved, medium consistency; UniProt: no TM).
| Cytoplasm stains in lung macrophages (HPA: High). | Matches the observed tissue pattern (HPA: High in lung macrophages). |
| Nuclei stain without cytoplasm (HPA: cytoplasm predominates). | Atypical; assess for artifact (HPA tissue IHC; standard IHC practice). |
| Adipocytes stain strongly (HPA: Not detected). | Consider cross-reactivity or endogenous enzyme signal (HPA tissue IHC; standard IHC practice). |
| Uniform brown haze obscures cells (standard IHC practice). | Likely background rather than cell-linked staining (HPA tissue IHC; standard IHC practice). |
| Lung macrophages show no signal (HPA: High). | Unexpected in a positive tissue; check assay performance (HPA tissue IHC; standard IHC practice). |
| Tissue choice (HPA tissue IHC) | Lung macrophages and gut glands stain High; adipocytes are not detected (HPA tissue IHC). |
| Processing (UniProt P29466) | CASP1 yields p20/p10; staining alone cannot identify the detected form without epitope data (UniProt P29466). |
| Isoforms (UniProt P29466) | Five isoforms are listed; antibody coverage requires epitope data (UniProt P29466). |
| Situation | Likely cause | Next action |
|---|---|---|
| No stain in lung macrophages (HPA: High). | Assay sensitivity may be low (standard IHC practice). | Check positive control, retrieval and antibody dilution (standard IHC practice). |
| Diffuse brown haze (standard IHC practice). | Nonspecific binding or endogenous enzyme activity (standard IHC practice). | Review blocking, washes and detection controls (standard IHC practice). |
| Nuclear-only signal (HPA: cytoplasm predominates). | Possible artifact; some nuclear staining occurs (HPA tissue IHC). | Compare a cytoplasmic positive control and no-primary control (standard IHC practice). |
| Adipocytes stain (HPA: Not detected). | Possible cross-reactivity or endogenous activity (HPA tissue IHC; standard IHC practice). | Check matched negative tissue and no-primary control (standard IHC practice). |
| Patchy stain across a section (standard IHC practice). | Uneven retrieval or reagent coverage (standard IHC practice). | Standardize retrieval and reagent coverage (standard IHC practice). |
| IF/ICC shows nuclear signal (HPA ICC-IF). | Nucleoplasm is uncertain; cytosol is supported (HPA ICC-IF). | Use cytosol as the localization reference in the separate IF/ICC guide (HPA ICC-IF). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Approved — Medium consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Duodenum | Glandular cells | High | Protein (IHC) | HPA → |
| Gallbladder | Glandular cells | High | Protein (IHC) | HPA → |
| Lung | Macrophages | High | Protein (IHC) | HPA → |
| Rectum | Glandular cells | High | Protein (IHC) | HPA → |
| Small intestine | Glandular cells | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Adrenal gland | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Breast | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Caudate | Glial cells | Not detected | Protein (IHC) | HPA → |
| Hippocampus | Glial cells | Not detected | Protein (IHC) | HPA → |
Troubleshoot CASP1 staining in paraffin sections by checking retrieval, compartment, cell type, controls, and whether the signal reflects protein abundance or activation.
The catalog shows real IHC images for human colon carcinoma, liver, and mammary cancer tissue; one antibody also lists IF and human, mouse, and rat reactivity (catalog image captions; applications/reactivity).
M00048-3 has a human colon carcinoma IHC image and lists IF plus human, mouse, and rat reactivity; M00048 has a paraffin-embedded human liver IHC image and lists human and rat reactivity (catalog image captions; applications/reactivity). PA1440 and PA1522 each have a human mammary cancer IHC-P image and list human reactivity (catalog image captions; reactivity).
Which to pick: For tissue IHC, choose M00048 for the pictured paraffin-embedded human liver sample; its fixative is unreported (M00048 image caption). For IF/ICC planning, choose M00048-3 because IF is listed, although no IF image or ICC validation is supplied (M00048-3 applications; image captions). M00048-3 is also the cross-species choice because it is a rabbit monoclonal listing human, mouse, and rat reactivity; its IHC image shows human colon carcinoma without reporting section processing or fixative (M00048-3 catalog entry; image caption).