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- Table of Contents
Plan CASP1 staining in paraffin sections using glandular cells and lung macrophages as positive tissue references (HPA tissue IHC). The guide covers fixation, chromogenic detection, and interpretation of predominantly cytoplasmic staining with occasional nuclear signal (HPA tissue IHC).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Predominantly cytoplasmic; sometimes nuclear (HPA tissue IHC) | |
| Staining pattern | Cytoplasmic staining in glandular cells and lung macrophages (HPA tissue IHC) | |
| Antigen retrieval | Citrate pH 6.0 HIER, 95–98 °C, 20 min (rule: cytoplasmic / membrane antigen) | |
| Positive control | Duodenum+4 more · see all | |
| Negative control | Adipose tissue+4 more · see all |
| Fixation | Keep fixation consistent across sections (standard IHC practice; not target-specific); Matched tissue-IHC evidence does not establish the fixation claim. Validate the specimen-specific method before use. (selected-SKU IHC image M00048-3) | |
| Caveat | Cleavage into p20/p10 complicates epitope interpretation (UniProt) | |
| Regulation | Inflammasome activation drives cleavage (UniProt) | |
| Isoform / epitope | Five isoforms; p20/p10 processing makes epitope position matter (UniProt) |
Compare the catalog antibody’s IHC-P protocol with four published CASP1 tissue IHC methods (PMC9174061; PMC5503597; PMC7202523; PMC9663582).
| Sample | Tissue sections; selected-image fixative not specified (standard IHC workflow) |
| Fixation | Image fixative and duration unreported (datasheet M00048-3); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat-induced epitope retrieval in citrate buffer, pH 6.0, 20 min at 95–98 °C (standard rule: cytoplasmic / membrane antigen) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% normal serum of the secondary host, 30 min, room temperature (standard) |
| Primary antibody | Rabbit anti-CASP1, 1:200-1:1000 (datasheet M00048-3) |
| Primary incubation | Overnight at 4 °C (standard) |
| Detection | HRP-polymer secondary, DAB chromogen 5–10 min (standard) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | CASP1-positive staining in glandular cells of duodenum (HPA tissue IHC: High). HPA tissue profile: Ubiquitous cytoplasmic expression with varying intensity that in cases was combined with nuclear expression. No signal in the no-primary control. |
CASP1 staining in paraffin sections should be mainly cytoplasmic, including in lung macrophages and glandular cells of the duodenum, gallbladder, rectum and small intestine (HPA: tissue IHC). UniProt also lists cell membrane localisation, although CASP1 has no transmembrane segment (UniProt P29466: localisation and topology). Treat this as an expected pattern, not an absolute rule: HPA rates its tissue IHC evidence Approved, with medium consistency between staining and RNA expression (HPA: reliability).
| Cytoplasmic signal in lung macrophages or glandular cells of duodenum, rectum or small intestine (HPA: High). | This fits the reported cell types and compartment (HPA: tissue IHC). Score the stained cells separately from neighbouring cells; a positive tissue does not imply that every cell in it should stain. |
| Nuclear staining is prominent while cytoplasmic staining is weak or absent. | Review before calling this a correct pattern. HPA describes mainly cytoplasmic tissue staining, sometimes with nuclear staining; its ICC-IF nucleoplasmic location is uncertain (HPA: tissue IHC; HPA: subcellular). Check morphology and staining controls. |
| Strong staining appears in adipocytes or soft-tissue fibroblasts. | These cell types were not detected in the listed HPA tissue IHC observations (HPA: Adipose tissue, Breast and Soft tissue). Consider nonspecific binding or detection background; compare a known-positive cell type processed in the same run. |
| Brown colour is widespread across cells and extracellular areas, with little cellular definition. | This does not resemble HPA's predominantly cytoplasmic, cell-resolved pattern (HPA: tissue IHC). Assess background with appropriate detection controls and review the staining workflow before interpreting it as CASP1. |
| No signal appears in lung macrophages or the listed High glandular cell populations. | These are expected positive comparisons (HPA: Lung, Duodenum, Gallbladder, Rectum and Small intestine). First check that the relevant cells are present and recognisable, then assess controls and the IHC staining workflow; an absent signal alone does not establish CASP1 absence. |
| Cell and compartment context | HPA reports ubiquitous cytoplasmic expression of varying intensity, sometimes combined with nuclear staining (HPA: tissue IHC). Compare the specific cell population and compartment, not only the overall colour of a tissue section. |
| Tissue evidence | Lung macrophages and several intestinal glandular populations are High, while adipocytes and soft-tissue fibroblasts are Not detected in the supplied observations (HPA: tissue IHC). HPA's Approved rating has medium RNA–staining consistency (HPA: reliability). |
| Processing and antibody recognition | CASP1 is a 404-aa precursor with annotated p20 and p10 chains and five isoforms (UniProt P29466: processing and isoforms). The payload gives no antibody epitope, so the staining pattern alone cannot identify which CASP1 form an antibody detects. |
| IF/ICC Q&A: Where should signal appear? | Mainly in the cytosol; HPA also reports nucleoplasm with uncertain support (HPA: subcellular). This ICC-IF observation helps interpret localisation but does not replace the tissue IHC pattern or establish a paraffin-section IF protocol. |
| Antigen retrieval | Retrieval is a general paraffin-section IHC workflow variable. Neither supplied source reports CASP1-specific fixation sensitivity or a retrieval-dependent tissue pattern; assess any retrieval change against controls without assuming a target-specific effect. |
| Situation | Likely cause | Next action |
|---|---|---|
| A listed High cell population is present but unstained. | Possible run-level staining failure or an unsuitable antibody condition; the result alone cannot distinguish these causes (HPA: High tissue IHC populations). | Confirm cell identity and section quality, then review the catalog antibody's IHC-P conditions and run controls. Interpret a negative result only after a known-positive comparison stains as expected. |
| The whole section has weak, flat colour. | Diffuse chromogenic background can obscure the cell-resolved cytoplasmic pattern reported for CASP1 (HPA: tissue IHC). | Review blocking, washing and detection controls as general IHC practice. Compare cellular staining with a control lacking the primary antibody before scoring weak positives. |
| Colour is strongest in adipocytes or soft-tissue fibroblasts. | The supplied HPA observations mark those cell types Not detected; the signal may reflect nonspecific staining or detection background (HPA: Adipose tissue, Breast and Soft tissue). | Check tissue morphology and detection controls, then compare the same run with lung macrophages or a listed High glandular population (HPA: tissue IHC). |
| Nuclei dominate the staining. | HPA allows nuclear staining in some tissue cases, but describes cytoplasm as the prevalent location; ICC-IF nucleoplasmic support is uncertain (HPA: tissue IHC; HPA: subcellular). | Document the cytoplasmic and nuclear components separately. Check staining controls and compare another reported positive cell population before assigning a nuclear-only result to CASP1. |
| An IF/ICC image disagrees with the paraffin-section slide. | The evidence describes different applications: cytosol is supported in ICC-IF, while tissue IHC is mainly cytoplasmic with occasional nuclear staining (HPA: subcellular; HPA: tissue IHC). | Judge the IHC slide against tissue cell types and its own controls. Use the ICC-IF record only as localisation context; it supplies no IF protocol for this section. |
| A retrieved section changes staining intensity or distribution. | No CASP1-specific fixation or retrieval effect is established by the supplied UniProt and HPA records. | Treat retrieval as a general IHC variable: compare matched sections with the same known-positive cells and detection controls, and report the observed change without attributing it to a documented CASP1 epitope effect. |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Approved — Medium consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Duodenum | Glandular cells | High | Protein (IHC) | HPA → |
| Gallbladder | Glandular cells | High | Protein (IHC) | HPA → |
| Lung | Macrophages | High | Protein (IHC) | HPA → |
| Rectum | Glandular cells | High | Protein (IHC) | HPA → |
| Small intestine | Glandular cells | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Adrenal gland | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Breast | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Caudate | Glial cells | Not detected | Protein (IHC) | HPA → |
| Hippocampus | Glial cells | Not detected | Protein (IHC) | HPA → |
Troubleshoot CASP1 staining in paraffin sections by checking retrieval, cell compartment, controls, and scoring before interpreting inflammatory activity.
Four anti-CASP1 antibodies have human tissue IHC images (catalog image captions). Listed reactivity spans human, mouse and rat; only M00048-3 lists IF, with no IF image supplied (catalog reactivity, applications and images).
M00048-3 has a human colon carcinoma IHC image, and M00048 has a paraffin-embedded human liver IHC image (respective IHC image captions). PA1440 and PA1522 each have a human mammary cancer IHC(P) image (respective IHC image captions).
Which to pick: For paraffin-section tissue IHC, choose M00048 for human liver or PA1440/PA1522 for human mammary cancer; their captions document those samples and section preparation, but do not report the fixative (respective IHC image captions). For IF/ICC, M00048-3 is the only SKU listing IF; ICC validation and an IF image are unreported (catalog applications and images). For cross-species work, M00048-3 is a rabbit monoclonal listing human, mouse and rat reactivity; its IHC image shows human colon carcinoma staining without reported section preparation or fixative (catalog description and reactivity; M00048-3 IHC image caption).