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- Table of Contents
Plan chromogenic EEF2 IHC in paraffin sections using an IHC-validated antibody (datasheet A00830-2). Compare staining with the cytoplasmic and membranous tissue pattern, using high-staining glandular cells as a reference (HPA tissue IHC).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Cytoplasmic and membranous staining in most tissues (HPA tissue IHC) | |
| Staining pattern | Glandular cells show cytoplasmic and membranous staining (HPA tissue IHC) | |
| Antigen retrieval | EDTA pH 8.0 HIER, heat-mediated (datasheet A00830-2) | |
| Positive control | Appendix+4 more · see all | |
| Negative control | None in HPA (detected in all 45 tissues); use no-primary + isotype controls |
| Fixation | Keep formalin fixation consistent across sections. (standard IHC practice; not target-specific) | |
| Caveat | Smooth muscle cells, fibroblasts and adipocytes stain weakly (HPA tissue IHC) | |
| Regulation | Tissue-specific expression regulation is unreported (UniProt) | |
| Isoform / epitope | 0 annotated isoforms; cleavage may affect epitope coverage (UniProt) |
The catalog antibody’s IHC-P protocol is paired with three published paraffin-section protocols for total or phospho-eEF2 staining (PMC4027928; PMC7956131; PMC5613342).
| Sample | Paraffin-embedded human breast cancer tissue; fixative not specified (datasheet A00830-2) |
| Fixation | Image fixative and duration unreported (datasheet A00830-2); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: EDTA pH 8.0 (datasheet A00830-2); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A00830-2) |
| Primary antibody | Rabbit anti-EEF2, 2μg/ml (datasheet A00830-2) |
| Primary incubation | Overnight at 4 °C (datasheet A00830-2) |
| Detection | Streptavidin-biotin complex (SABC), DAB chromogen (datasheet A00830-2) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | EEF2-positive staining in glandular cells of appendix (HPA tissue IHC: High). HPA tissue profile: Cytoplasmic and membranous expression in most tissues. No signal in the no-primary control. |
In paraffin sections, expect EEF2 staining mainly in the cytoplasm of many cell types, with membranous staining also reported (HPA: tissue IHC profile). Strong examples include appendix glandular cells, bone marrow hematopoietic cells, and bronchial respiratory epithelial cells (HPA: High). HPA rates the tissue IHC evidence Enhanced, with medium consistency between staining and RNA data (HPA: reliability). EEF2 has no transmembrane segment (UniProt P13639: topology).
| Cytoplasmic staining across several cell types, including strong appendix glands or bone marrow cells. | This fits the broad tissue profile (HPA: cytoplasmic and membranous expression in most tissues). Appendix glandular and bone marrow hematopoietic cells are each rated High (HPA: tissue IHC). Compare cell types within the section; uniform intensity is not required by that profile. |
| Predominantly nuclear staining with little cytoplasmic signal. | Recheck staining specificity and nuclear counterstain interpretation because this differs from the reported tissue IHC profile (HPA: cytoplasmic and membranous). Do not call every nuclear signal an artefact: UniProt also lists the nucleus and describes nuclear translocation of a modified C-terminal cleavage product (UniProt P13639: subcellular location). |
| A strong signal appears chiefly in adipocytes, fibroblasts, or smooth muscle cells. | These are listed as Low, so a dominant strong signal deserves a specificity check (HPA: adipocytes, fibroblasts, smooth muscle cells Low). Compare an HPA High cell population and a no-primary control; unexpected color can reflect cross-reactivity or endogenous detection activity (general IHC practice). Low does not mean absent. |
| Color spreads across cell-free areas or obscures cell boundaries. | Treat the diffuse deposit as background until controls establish otherwise (general IHC practice). It cannot be assigned to EEF2 from the tissue profile alone (HPA: cellular cytoplasmic and membranous profile). Inspect the no-primary control and review blocking, washes, and detection conditions (general IHC practice). |
| No convincing staining in appendix glandular cells or bronchial respiratory epithelium. | These are useful expected-positive checks because both are rated High (HPA: tissue IHC). An absent signal calls for review of the antibody's IHC-P instructions, retrieval, antibody dilution, and detection controls (general IHC practice). The supplied sources establish no EEF2-specific retrieval requirement or fixation sensitivity. |
| Subcellular location | The broad tissue IHC description includes cytoplasmic and membranous expression (HPA: tissue IHC). EEF2 lacks a transmembrane segment, so a membrane-associated appearance does not establish membrane insertion (UniProt P13639: topology). Assess the pattern alongside cytoplasmic staining. |
| Choice of comparison cells | Appendix and breast glandular cells, bone marrow hematopoietic cells, and cervical squamous cells are rated High (HPA: tissue IHC). Endometrial stromal cells are Medium, while adipocytes, fibroblasts, and smooth muscle cells are Low (HPA: tissue IHC). These levels guide comparison; they are not absolute cutoffs. |
| Strength of tissue evidence | HPA labels the tissue IHC reliability Enhanced but describes only medium consistency between antibody staining and RNA expression (HPA: reliability). Its antibody entries list two rabbit polyclonals as IHC Enhanced and one as IHC Approved (HPA: antibody validation). Match any cited validation to the antibody actually used. |
| Modified or cleaved EEF2 | UniProt records phosphorylation and other modified residues, plus nuclear translocation of a SUMOylated C-terminal cleavage product (UniProt P13639: modifications and subcellular location). The supplied sources do not locate the catalog antibody's epitope, so they cannot predict whether it detects particular modified or cleaved forms. |
| Antigen retrieval | Follow the IHC-validated antibody's own retrieval instructions and assess controls when optimizing a paraffin-section workflow (general IHC practice). No EEF2-specific retrieval condition or fixation effect is established by the supplied HPA tissue observations or UniProt record. |
| IF/ICC Q: What location should fluorescence show? | A: Cytosolic signal is supported; the reported plasma-membrane location is uncertain (HPA: ICC-IF subcellular). UniProt also lists the nucleus under the stated cleavage and translocation condition (UniProt P13639: subcellular location). Use the separate IF/ICC guide for its workflow. |
| Situation | Likely cause | Next action |
|---|---|---|
| Expected-positive cells are unstained. | The run may have insufficient antibody or detection signal (general IHC practice); appendix glandular cells are High (HPA: tissue IHC). | Check the run's positive and reagent controls, then review the IHC-validated antibody's stated dilution and retrieval instructions (general IHC practice). No EEF2-specific retrieval condition is supplied. |
| The section is uniformly dark. | Excess antibody or detection signal, inadequate washing, or endogenous detection activity can obscure cell-level localization (general IHC practice). | Compare the no-primary control, review blocking and wash steps, and adjust detection or antibody concentration according to the assay instructions (general IHC practice). Reassess whether cytoplasmic cell detail is visible (HPA: tissue IHC profile). |
| Strong color occurs mainly in an HPA Low cell population. | A dominant signal in adipocytes, fibroblasts, or smooth muscle cells conflicts with their Low ratings (HPA: tissue IHC). Cross-reactivity or endogenous detection activity is possible (general IHC practice). | Check a no-primary control and compare a High cell population in the same run (general IHC practice; HPA: tissue IHC levels). Do not interpret Low as a required negative result. |
| Only nuclear staining is visible. | This differs from the usual tissue IHC profile (HPA: cytoplasmic and membranous), although UniProt describes conditional nuclear translocation of a cleavage product (UniProt P13639: subcellular location). | Verify counterstain and detection controls, and check the antibody's documented target recognition (general IHC practice). Keep the nuclear result provisional because the supplied sources do not establish which EEF2 forms this antibody detects. |
| Membrane staining dominates without clear cytoplasmic staining. | Membranous expression is reported in tissue IHC, but HPA marks plasma-membrane localization uncertain in ICC-IF (HPA: tissue IHC and subcellular). | Compare cellular boundaries and cytoplasm against counterstain and controls (general IHC practice). Report the observed distribution without inferring membrane insertion; EEF2 has no transmembrane segment (UniProt P13639: topology). |
| The catalog antibody's staining differs from an HPA example. | HPA validation belongs to its listed antibodies and the tissue profile has medium staining-to-RNA consistency (HPA: antibody validation and reliability). | Confirm the catalog antibody's IHC-P validation and follow its instructions, then compare a documented High cell type and assay controls (general IHC practice; HPA: tissue IHC). Do not transfer an HPA antibody's validation status to another antibody. |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Enhanced — Medium consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Appendix | Glandular cells | High | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | High | Protein (IHC) | HPA → |
| Breast | Glandular cells | High | Protein (IHC) | HPA → |
| Bronchus | Respiratory epithelial cells | High | Protein (IHC) | HPA → |
| Cerebral cortex | Glial cells | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| None in HPA: EEF2 is detected in all 45 scored tissues. Use a no-primary (secondary-only) and an isotype control instead. | ||||
Troubleshoot EEF2 staining in paraffin section IHC by checking retrieval, compartment, controls and scoring against the evidence for the selected antibody.
Anti-EEF2 antibodies have paraffin-section IHC images from human cancers and rat ovary, plus IF images from human cells (catalog image captions).
A00830-2 and A00830-1 have IHC images from human breast cancer paraffin sections; A00830-2 also has an IF image from A431 cells (catalog image captions). M00830-2 has a human breast cancer paraffin-section IHC image and a HEPG2 cell IF image, while M00830-1 has human prostate cancer and rat ovary paraffin-section IHC images (catalog image captions).
Which to pick: For tissue IHC, M00830-1 offers a rabbit monoclonal with both human and rat paraffin-section images (catalog host/clone; M00830-1 IHC captions). For IF/ICC, choose A00830-2 or M00830-2: both list IF/ICC and have human-cell IF images; M00830-2 is a mouse monoclonal (catalog applications/host/clone; respective IF captions). For broader species coverage, A00830-1 lists human, monkey, mouse, rat and zebrafish reactivity, though its pictured IHC is in human tissue; the fixative is unreported in each SKU’s paraffin-section IHC caption (catalog reactivity; respective IHC captions).