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- Table of Contents
Plan GLG1 staining in paraffin sections using the granular cytoplasmic tissue profile (HPA tissue IHC). Interpret the signal alongside GLG1’s Golgi membrane localisation and check which region of the protein the antibody recognizes (UniProt).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Granular cytoplasm (HPA tissue IHC); Golgi membrane (UniProt) | |
| Staining pattern | Widespread granular cytoplasmic staining (HPA tissue IHC) | |
| Antigen retrieval | EDTA pH 8.0 HIER, heat-mediated (datasheet A07510-1) | |
| Positive control | Adrenal gland+4 more · see all | |
| Negative control | None in HPA (detected in all 45 tissues); use no-primary + isotype controls |
| Fixation | Keep fixation conditions consistent across sections. (standard IHC practice; not target-specific) | |
| Caveat | Lung type I alveolar cells show low staining (HPA tissue IHC) | |
| Regulation | No expression regulator specified (UniProt) | |
| Isoform / epitope | 3 isoforms; map epitopes against the membrane topology (UniProt) |
The catalog IHC-P protocol (datasheet A07510-1) is accompanied by three published GLG1 IHC protocols (PMC7139395; PMC5788584; PMC4224387).
| Sample | Paraffin-embedded mouse kidney tissue; fixative not specified (datasheet A07510-1) |
| Fixation | Image fixative and duration unreported (datasheet A07510-1); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: EDTA pH 8.0 (datasheet A07510-1); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A07510-1) |
| Primary antibody | Rabbit anti-GLG1, 2-5 μg/ml (datasheet A07510-1) |
| Primary incubation | Overnight at 4 °C (datasheet A07510-1) |
| Detection | HRP-conjugated secondary, DAB chromogen (datasheet A07510-1) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | GLG1-positive staining in glandular cells of adrenal gland (HPA tissue IHC: High). HPA tissue profile: Ubiquitous cytoplasmic expression in a granular pattern. No signal in the no-primary control. |
GLG1 is a Golgi membrane protein, with its large luminal domain spanning residues 30–1145 (UniProt Q92896 topology). In paraffin section IHC, expect granular cytoplasmic staining in many cell types, including glandular, respiratory epithelial, and neuronal cells (HPA tissue IHC: ubiquitous granular cytoplasmic expression; High in these listed cells). HPA rates the tissue pattern Supported, with medium consistency between antibody staining and RNA expression (HPA tissue IHC).
| Granular cytoplasmic chromogen in glandular cells of colon or duodenum. | This fits the reported pattern and cell distribution (HPA tissue IHC: ubiquitous granular cytoplasmic expression; High in colon and duodenal glandular cells). Assess the granules within intact cells, since pooled chromogen can obscure their location (general IHC practice). |
| Predominantly nuclear staining, or a uniform cell-surface rim without cytoplasmic granules. | These compartments do not match the principal Golgi localization (UniProt Q92896 subcellular location; HPA subcellular: Golgi apparatus, supported). Check counterstain, precipitate, and detection controls before interpreting the signal as GLG1 (general IHC practice). |
| Strong staining in an unexpected cell population while a listed high-staining population is faint. | For example, alveolar type I cells are listed Low, whereas bronchial respiratory epithelial cells are High (HPA tissue IHC). Confirm cell identity and distribution; cross-reactivity or endogenous detection activity is possible, but this contrast alone does not establish either cause (general IHC practice). |
| Diffuse haze across tissue, extracellular spaces, or a largely cell-free area. | This differs from the reported intracellular granular pattern (HPA tissue IHC). Uneven reagent coverage, inadequate washes, or chromogen deposition can produce background; compare a control lacking primary antibody and inspect tissue edges (general IHC practice). |
| No visible staining in a section containing colon or duodenal glandular cells. | Both are listed High and provide useful positive-reference cell populations (HPA tissue IHC). First check tissue integrity, detection reagents, and the catalog antibody's IHC-P instructions; a negative slide alone does not prove GLG1 absence (general IHC practice). |
| Membrane topology and compartment | GLG1 has one transmembrane segment at 1146–1166 and a large luminal domain (UniProt Q92896 topology). The observed IHC pattern is granular cytoplasmic (HPA tissue IHC); topology alone does not identify the catalog antibody's epitope. |
| Tissue and cell selection | HPA lists glandular cells in colon and duodenum as High and alveolar type I cells as Low (HPA tissue IHC). Use the listed cell types when comparing slides; Low is not a validated negative control (HPA tissue IHC). |
| Antibody evidence | The listed antibody HPA010815 has Supported IHC status, while the tissue profile has medium antibody–RNA consistency (HPA antibody validation; HPA tissue IHC). Treat a matching pattern as supporting evidence, especially when evaluating weak or unexpected staining. |
| Antigen retrieval | Use the catalog antibody's IHC-P retrieval instructions as the starting condition (general IHC practice). The supplied UniProt and HPA records do not establish GLG1-specific retrieval requirements or fixation sensitivity. |
| Isoforms and processing | Three isoforms are listed, and the signal peptide occupies residues 1–29 (UniProt Q92896 isoforms; processing). Without an antibody epitope or isoform-validation record, do not assign a staining difference to a particular isoform or to shedding. |
| IF/ICC Q&A: where should GLG1 appear? | Mainly at the Golgi apparatus (HPA subcellular: supported), consistent with the Golgi membrane annotation (UniProt Q92896). IF/ICC has its own guide; this localization is an interpretation reference, not an IF protocol. |
| Situation | Likely cause | Next action |
|---|---|---|
| Listed High cells show no chromogen. | A failed detection step or an unsuitable assay condition is possible; colon and duodenal glandular cells are listed High (HPA tissue IHC; general IHC practice). | Check a known-working IHC control and the catalog antibody's IHC-P instructions, then verify primary antibody, detection reagents, and chromogen were applied (general IHC practice). |
| Signal is mainly nuclear. | Nuclear-dominant signal conflicts with the Golgi annotation and reported granular cytoplasmic IHC profile (UniProt Q92896; HPA tissue IHC). | Compare with a primary-omission control, inspect counterstain and precipitate, and reassess localization in intact cells (general IHC practice). |
| Tissue-wide brown haze hides individual cells. | Nonspecific reagent binding or incomplete washing may obscure the reported granular pattern (HPA tissue IHC; general IHC practice). | Review blocking, reagent concentration, wash coverage, and chromogen development; compare a control lacking primary antibody (general IHC practice). |
| Color persists in the primary-omission control. | Endogenous detection activity or reagent deposition can generate color without the primary antibody (general chromogenic IHC practice). | Inspect the detection chemistry and its appropriate endogenous-activity block; check for deposits before scoring GLG1 staining (general chromogenic IHC practice). |
| Alveolar type I cells appear stronger than bronchial respiratory epithelial cells. | This reverses their listed Low and High levels, respectively (HPA tissue IHC); cell identification or background may explain the discrepancy (general IHC practice). | Confirm the compared cell types, inspect a primary-omission control, and repeat the comparison in well-preserved regions (general IHC practice). |
| Granules are difficult to distinguish from dark deposits. | Excess chromogen or precipitate can obscure subcellular detail (general chromogenic IHC practice); the reference pattern is granular cytoplasmic (HPA tissue IHC). | Inspect deposits outside cells, review chromogen development, and score only clearly localized intracellular signal (general chromogenic IHC practice). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Supported — Medium consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adrenal gland | Glandular cells | High | Protein (IHC) | HPA → |
| Appendix | Glandular cells | High | Protein (IHC) | HPA → |
| Bronchus | Respiratory epithelial cells | High | Protein (IHC) | HPA → |
| Caudate | Neuronal cells | High | Protein (IHC) | HPA → |
| Cerebellum | Cells in molecular layer | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| None in HPA: GLG1 is detected in all 45 scored tissues. Use a no-primary (secondary-only) and an isotype control instead. | ||||
Troubleshoot GLG1 staining by checking retrieval, Golgi-pattern specificity, controls, and cell-specific scoring in paraffin-section IHC (UniProt Q92896 localisation; HPA: granular cytoplasmic profile).
Two anti-GLG1 antibodies have IHC images from paraffin sections: skeletal muscle for A07510 and mouse and rat kidney for A07510-1 (catalog image captions). Neither has IF/ICC data (catalog applications and image lists).
A07510 has an IHC-P image from formalin-fixed, paraffin-embedded skeletal muscle; the caption does not identify the species (A07510 image caption). A07510-1 has IHC images from mouse and rat paraffin-embedded kidney; the fixative is unreported (A07510-1 image captions).
Which to pick: For tissue IHC, choose A07510 for paraffin-section, paraffin-embedded skeletal muscle or A07510-1 for mouse or rat paraffin-embedded kidney (respective image captions). Neither SKU lists IF/ICC validation, so there is no supported IF/ICC pick (catalog applications and image lists). For broader species reactivity, A07510-1 lists human, mouse and rat, but its IHC conditions specify mouse and rat; A07510 is rabbit polyclonal and lists human and mouse reactivity (catalog reactivity, dilution and clonality fields). The selected A07510-1 tissue-IHC caption documents paraffin sections, but does not specify the fixative (selected-SKU IHC image A07510-1).