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- Table of Contents
Plan AKT1 staining in paraffin sections using the observed widespread nuclear tissue pattern (HPA tissue IHC). Compare staining intensity across consistently fixed sections, and assess localisation in the context of activation-dependent nuclear translocation (UniProt).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Nuclear staining observed in tissue IHC (HPA tissue IHC) | |
| Staining pattern | Widespread nuclear staining across tissue cell types (HPA tissue IHC) | |
| Antigen retrieval | Tris-EDTA pH 9.0 HIER, 95–98 °C, 20 min (rule: nuclear antigen) | |
| Positive control | Adrenal gland+4 more · see all | |
| Negative control | None in HPA (detected in all 45 tissues); use no-primary + isotype controls |
| Fixation | Keep fixation consistent across sections. (standard IHC practice; not target-specific) | |
| Caveat | Activation can alter nuclear localisation (UniProt) | |
| Regulation | Protein levels rise in prostate cancer (UniProt) | |
| Isoform / epitope | Two isoforms; one 1–480 chain is annotated (UniProt) |
Compare the catalog antibody’s IHC-P protocol with published phospho-AKT1 melanoma and AKT1 tissue-section methods (PMC6324666; PMC3369856; PMC9600081).
| Sample | Paraffin-embedded human colon tissue; fixative not specified (datasheet M00024-1) |
| Fixation | Image fixative and duration unreported (datasheet M00024-1); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat-induced epitope retrieval in Tris-EDTA buffer, pH 9.0, 20 min at 95–98 °C (standard rule: nuclear antigen) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% normal serum of the secondary host, 30 min, room temperature (standard) |
| Primary antibody | Rabbit monoclonal (clone EBG-1) anti-AKT1, 1:50 (datasheet M00024-1) |
| Primary incubation | Overnight at 4 °C (standard) |
| Detection | HRP-polymer secondary, DAB chromogen 5–10 min (standard) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | AKT1-positive staining in glandular cells of adrenal gland (HPA tissue IHC: High). HPA tissue profile: Ubiquitous nuclear expression. No signal in the no-primary control. |
AKT1 is a non-transmembrane protein found in the nucleus, cytoplasm and, under some conditions, at the cell membrane (UniProt P31749 topology and location). In IHC, expect widespread nuclear staining, including strong staining in breast glandular cells; HPA rates the tissue pattern Supported (HPA: ubiquitous nuclear expression; High in breast glandular cells; Supported).
| Widespread nuclear stain, strong in breast glands (HPA: ubiquitous nuclear; High in breast glands) | Consistent with the supported tissue pattern (HPA: Supported). |
| Extracellular-only stain (UniProt P31749 topology) | Unexpected for non-transmembrane AKT1; assess artefact (UniProt P31749 topology). |
| Myocytes stain strongly while breast glands are blank (HPA: Low in myocytes; High in breast glands) | Consider cross-reactivity or endogenous detection activity (general IHC practice). |
| Diffuse stain obscures nuclei (HPA: ubiquitous nuclear expression) | Background may prevent compartment scoring (general IHC practice). |
| No stain in breast glandular cells (HPA: High in breast glandular cells) | Investigate assay failure before calling the sample negative (general IHC practice). |
| Antibody validation (HPA: IHC Supported for HPA002891, CAB003765, CAB080436) | The reported tissue pattern is Supported (HPA: high staining–RNA consistency). |
| Compartment (UniProt P31749 location) | Cytoplasmic or membrane signal can occur; assess it alongside nuclear staining (UniProt P31749 location). |
| IF/ICC? | Nucleoplasm is supported; microtubules are uncertain (HPA: ICC-IF subcellular). |
| Situation | Likely cause | Next action |
|---|---|---|
| Breast glands are blank (HPA: High in breast glandular cells) | Possible assay failure (general IHC practice). | Check a known-positive section and detection reagents (general IHC practice). |
| Diffuse colour obscures nuclei (HPA: ubiquitous nuclear expression) | Possible nonspecific background (general IHC practice). | Review blocking, antibody dilution and washes (general IHC practice). |
| Colour persists without primary antibody (general IHC practice) | Possible endogenous detection activity (general IHC practice). | Check the no-primary control and appropriate blocking (general IHC practice). |
| Extracellular-only colour (UniProt P31749 topology) | Possible artefact (UniProt P31749 topology). | Compare with a no-primary control (general IHC practice). |
| Nuclear stain is weak across the section (HPA: ubiquitous nuclear expression) | Possible weak assay signal (general IHC practice). | Check retrieval and detection steps with a positive control (general IHC practice). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Supported — High consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adrenal gland | Glandular cells | High | Protein (IHC) | HPA → |
| Appendix | Lymphoid tissue | High | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | High | Protein (IHC) | HPA → |
| Breast | Glandular cells | High | Protein (IHC) | HPA → |
| Bronchus | Respiratory epithelial cells | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| None in HPA: AKT1 is detected in all 45 scored tissues. Use a no-primary (secondary-only) and an isotype control instead. | ||||
Troubleshoot chromogenic AKT1 staining in paraffin sections by checking retrieval, cellular distribution, antibody specificity, controls, and scoring.
Three catalog antibodies have IHC images from human paraffin-embedded tissues; IF/ICC is also listed for each, and catalog reactivity covers human, mouse, and rat (catalog: IHC captions, applications, reactivity).
M00024-1 shows IHC in paraffin-embedded human colon and IF in HeLa cells (catalog: image captions); P00024-2 shows IHC in paraffin-embedded human colorectal adenocarcinoma and IF in A549 cells (catalog: image captions). P00024-5 shows IHC in paraffin-embedded human kidney and IF in PDGF-treated NIH/3T3 cells (catalog: image captions).
Which to pick: For tissue IHC, choose M00024-1 for AKT1, P00024-2 for phospho-AKT1 T450, or P00024-5 for phospho-AKT Ser473 according to the listed antibody targets; each has its own paraffin-section IHC image, with fixative unreported (catalog: titles, IHC captions). For IF/ICC, all three list those applications, but the illustrated samples differ: HeLa for M00024-1, A549 for P00024-2, and NIH/3T3 for P00024-5 (catalog: applications, IF captions). All three are rabbit monoclonals listed as reactive with human, mouse, and rat; the cited tissue IHC images are human, so mouse and rat tissue performance still needs verification (catalog: host, clone, reactivity, IHC captions).