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- Table of Contents
Use the ubiquitous nuclear tissue profile as a benchmark for AKT1 paraffin-section IHC (HPA tissue IHC). This guide covers fixation, detection and scoring with an IHC-validated total-AKT1 antibody (datasheet: M00024-1).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Ubiquitous nuclear tissue staining (HPA tissue IHC) | |
| Staining pattern | Nuclear staining across tissue cell types (HPA tissue IHC) | |
| Antigen retrieval | Tris-EDTA pH 9.0 HIER, 95–98 °C, 20 min (rule: nuclear antigen) | |
| Positive control | Adrenal gland+4 more · see all | |
| Negative control | None in HPA (detected in all 45 tissues); use no-primary + isotype controls |
| Fixation | Keep fixation consistent and avoid overfixation (standard IHC practice; not target-specific) | |
| Caveat | Activation can redistribute AKT1 to nuclei (UniProt) | |
| Regulation | Higher in malignant prostate (UniProt) | |
| Isoform / epitope | Two isoforms; antibody epitope coverage is unspecified (UniProt; datasheet: M00024-1) |
Compare the catalog antibody’s IHC-P protocol with 2 published AKT1 IHC protocols (PMC3369856; PMC9600081).
| Sample | Paraffin-embedded human colon tissue; fixative not specified (datasheet M00024-1) |
| Fixation | Image fixative and duration unreported (datasheet M00024-1); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat-induced epitope retrieval in Tris-EDTA buffer, pH 9.0, 20 min at 95–98 °C (standard rule: nuclear antigen) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% normal serum of the secondary host, 30 min, room temperature (standard) |
| Primary antibody | Rabbit monoclonal (clone EBG-1) anti-AKT1, 1:50 (datasheet M00024-1) |
| Primary incubation | Overnight at 4 °C (standard) |
| Detection | HRP-polymer secondary, DAB chromogen 5–10 min (standard) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | AKT1-positive staining in glandular cells of adrenal gland (HPA tissue IHC: High). HPA tissue profile: Ubiquitous nuclear expression. No signal in the no-primary control. |
AKT1 has a predominantly nuclear tissue IHC pattern (HPA: Supported; high consistency between staining and RNA data). Expect staining in many cell types, including adrenal and breast glandular cells, bronchial respiratory epithelial cells, and cerebral cortical neurons (HPA: High in each). Cytoplasmic and activation-dependent membrane localization are also biologically plausible (UniProt P31749: subcellular location). AKT1 has no transmembrane segment (UniProt P31749: topology).
| Nuclear staining across several tissue compartments, including clearly stained glandular cells. | This fits the ubiquitous nuclear tissue profile (HPA: Supported). High staining in adrenal and breast glandular cells provides useful tissue context (HPA: High). Judge the signal in identifiable cells against the counterstain and local background; a brown deposit without a clear cellular boundary is not sufficient for a localization call (standard IHC practice). |
| Cytoplasmic staining accompanies nuclear staining; some cells show membrane-associated signal. | Cytoplasmic localization is recorded for AKT1, and activated AKT1 can move to the cell membrane and subsequently the nucleus (UniProt P31749: subcellular location). A total-AKT1 IHC pattern alone cannot establish phosphorylation or activation state (UniProt P31749: activation-linked localization; standard IHC interpretation). Review membrane-like staining in its cellular context before scoring it as specific. |
| Predominantly extracellular staining, or pigment over tissue-free areas, is called a positive result. | That distribution does not match AKT1's recorded cellular locations or lack of a transmembrane segment (UniProt P31749: subcellular location and topology). Check whether deposit follows tissue edges, damaged areas, or reagent pooling (standard IHC practice). Do not discard all nonnuclear signal automatically: cytoplasmic and condition-dependent membrane localization are plausible (UniProt P31749). |
| Strong staining appears in an unexpected cell population while recognizable cells show a different pattern. | AKT1 is reported in all human cell types analyzed, so an unexpected stained cell type alone does not prove cross-reactivity (UniProt P31749: tissue specificity). Compare its compartment and intensity with nearby cells and an independent control (standard IHC practice). Endogenous detection activity or antibody cross-reactivity becomes more concerning when the signal is diffuse, misplaced, or persists in a reagent control (standard IHC practice). |
| No convincing signal appears in an intact, known-positive section. | High staining is reported in adrenal glandular cells, appendix lymphoid tissue, bone-marrow hematopoietic cells, and other listed populations (HPA: High). First confirm that the expected cells are present and that the detection run worked (standard IHC practice). A negative result under one staining condition does not override the reported tissue pattern (HPA: Supported; standard IHC interpretation). |
| Tissue and cell selection | Use an identifiable HPA High population to judge a run, such as adrenal glandular cells or cerebral cortical neurons (HPA: High). Salivary glandular cells and skeletal myocytes are reported Low and are weaker choices for ruling out a failed stain (HPA: Low). The HPA tissue profile is Supported, meaning staining and RNA data show high consistency (HPA: reliability description). |
| Cellular compartment and activation | The tissue IHC profile emphasizes nuclei, while UniProt also lists cytoplasm and cell membrane (HPA: ubiquitous nuclear expression; UniProt P31749: subcellular location). UniProt links membrane localization and later nuclear translocation to activation-related phosphorylation (UniProt P31749). Neither compartment alone establishes the activation state of a section stained for total AKT1 (standard IHC interpretation). |
| Antibody validation and target identity | The listed antibodies HPA002891, CAB003765, and CAB080436 each have Supported IHC status (HPA: antibody validation). AKT1 is one of three closely related AKT kinases, and two AKT1 isoforms are recorded (UniProt P31749: function and isoforms). Confirm the particular antibody's documented specificity before assigning an unusual pattern uniquely to AKT1 (standard IHC practice). |
| What should IF/ICC show? | HPA reports supported nucleoplasm localization in ICC-IF; it also lists other locations with varying confidence, including uncertain microtubules and approved principal and end pieces (HPA: subcellular summary). IF/ICC images and validation do not replace the tissue IHC pattern or establish an IHC-P protocol (HPA: subcellular and tissue profiles). Interpret IF/ICC on its separate guide page. |
| Situation | Likely cause | Next action |
|---|---|---|
| Expected nuclei are pale in a high-staining tissue. | The selected area may lack the relevant cells, or the IHC run may have inadequate signal (HPA: High in listed cell populations; standard IHC practice). | Locate the specified cell population on the counterstained section, then check a known-positive control and the run's detection steps before interpreting the sample (HPA: High; standard IHC practice). |
| Brown signal spreads evenly across stroma and empty spaces. | Diffuse deposit is inconsistent with the reported intracellular locations of AKT1 (UniProt P31749: subcellular location); nonspecific reagent background is possible (standard IHC practice). | Compare with a reagent control, inspect tissue edges and pooling, and review blocking, washes, and chromogen development (standard IHC practice). Score only signal that resolves to cells and compartments. |
| A strong cytoplasmic or membrane pattern seems to conflict with the nuclear reference. | Both compartments are listed for AKT1, while the HPA tissue profile summarizes a ubiquitous nuclear pattern (UniProt P31749: subcellular location; HPA: tissue profile). | Record nuclear and nonnuclear compartments separately. Compare with the validated IHC pattern and local controls; avoid inferring phosphorylation from total-AKT1 staining (HPA: Supported IHC; standard IHC interpretation). |
| Signal appears chiefly outside cells or along damaged section edges. | AKT1 has no transmembrane segment and is assigned cellular locations, making extracellular-only staining implausible (UniProt P31749: topology and subcellular location). Edge deposit can reflect a staining artifact (standard IHC practice). | Inspect intact fields and a reagent control, then review section handling, washing, and chromogen development (standard IHC practice). Exclude damaged edges from scoring. |
| A low-staining tissue is negative while the run control is positive. | Salivary glandular cells and skeletal myocytes are reported Low, so absence of an obvious signal there is less informative than loss in a High population (HPA: Low; HPA: High). | Judge assay performance in an identifiable HPA High population on a suitable control section; report the low-staining tissue result with its cell context (HPA: tissue IHC; standard IHC practice). |
| Unexpected cells stain despite a clean background. | Broad AKT1 expression is reported, so cell identity by itself does not establish an error (UniProt P31749: tissue specificity). Antibody cross-reactivity remains a possibility for an unsupported pattern (standard IHC practice). | Check compartment, morphology, and the antibody's IHC validation; compare with a suitable independent control before attributing the signal specifically to AKT1 (HPA: Supported IHC; standard IHC practice). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Supported — High consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adrenal gland | Glandular cells | High | Protein (IHC) | HPA → |
| Appendix | Lymphoid tissue | High | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | High | Protein (IHC) | HPA → |
| Breast | Glandular cells | High | Protein (IHC) | HPA → |
| Bronchus | Respiratory epithelial cells | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| None in HPA: AKT1 is detected in all 45 scored tissues. Use a no-primary (secondary-only) and an isotype control instead. | ||||
Troubleshoot AKT1 staining by checking retrieval, compartment patterns, antibody specificity, and controls before comparing chromogenic IHC results across sections.
Three catalog antibodies have IHC images from human paraffin sections and IF images from cultured cells (catalog image captions); all list human, mouse and rat reactivity (catalog reactivity).
M00024-1 has IHC data from human colon and IF data from HeLa cells (M00024-1 image captions). P00024-2 has IHC data from human colorectal adenocarcinoma and IF data from A549 cells; P00024-5 has IHC data from human kidney and IF data from NIH/3T3 cells (respective image captions).
Which to pick: For paraffin-section IHC, choose M00024-1 for total AKT1, P00024-2 for phospho-T450, or P00024-5 for phospho-Ser473 (catalog titles and each SKU’s IHC caption); the captions do not report the fixative. For IF/ICC, all three list those applications, with IF images from HeLa, A549 and NIH/3T3 cells, respectively (catalog applications and IF captions). All three are rabbit monoclonals that list human, mouse and rat reactivity, but their IHC captions document human tissue only (catalog host, clone, reactivity and IHC captions).