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- Table of Contents
Plan paraffin-section MCM2 IHC around distinct nuclear staining in proliferative cells (HPA tissue IHC). Use the catalog antibody’s IHC-P conditions as a starting point and compare nuclear staining across tissue regions with different proliferative-cell content (HPA tissue IHC).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Nuclear staining in proliferative cells (HPA tissue IHC) | |
| Staining pattern | Distinct nuclear staining in proliferative cells (HPA tissue IHC) | |
| Antigen retrieval | EDTA pH 8.0 HIER, heat-mediated (datasheet M00374) | |
| Positive control | Appendix+4 more · see all | |
| Negative control | Adipose tissue+4 more · see all |
| Fixation | Keep fixation consistent across sections. (standard IHC practice; not target-specific) | |
| Caveat | Staining varies with proliferative-cell content (HPA tissue IHC) | |
| Regulation | Enriched in proliferative cells (HPA tissue IHC) | |
| Isoform / epitope | No isoforms annotated; chain spans residues 2–904 (UniProt) |
The catalog antibody’s IHC-P protocol (datasheet: M00374) appears alongside four published MCM2 IHC protocols (PMC1343577; PMC3715081; PMC3140260; PMC6982666).
| Sample | Paraffin-embedded human bladder cancer tissue; fixative not specified (datasheet M00374) |
| Fixation | Image fixative and duration unreported (datasheet M00374); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: EDTA pH 8.0 (datasheet M00374); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet M00374) |
| Primary antibody | Rabbit monoclonal (clone BCA-13) anti-MCM2, 1:50 (datasheet M00374) |
| Primary incubation | Overnight at 4 °C (datasheet M00374) |
| Detection | HRP-conjugated secondary, DAB chromogen (datasheet M00374) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | MCM2-positive staining in germinal center cells of appendix (HPA tissue IHC: High). HPA tissue profile: Distinct nuclear expression in proliferative cells. No signal in the no-primary control. |
MCM2 should stain nuclei in proliferative cells: UniProt places it in the nucleus and on chromosomes, while HPA reports distinct nuclear expression in proliferative cells (UniProt P49736; HPA: tissue IHC, Enhanced reliability). Its lack of a transmembrane segment supports a nuclear rather than membrane pattern (UniProt P49736 topology).
| Distinct nuclear staining in germinal center cells or hematopoietic cells. | This matches HPA's high staining in appendix and lymph node germinal centers and bone marrow hematopoietic cells (HPA: tissue IHC). Judge the pattern by the stained cells and their nuclear compartment; HPA's tissue-level reliability is Enhanced, meaning staining is highly consistent with RNA expression (HPA: tissue IHC). |
| Predominantly cytoplasmic or membrane staining, with little nuclear signal. | Treat this as discordant with the expected IHC pattern (UniProt P49736: nucleus and chromosome; HPA: distinct nuclear expression). Check the antibody's IHC validation, detection controls and slide morphology before assigning it to MCM2. HPA reports additional cytosol and vesicle locations as uncertain in ICC-IF; that does not establish a cytoplasmic IHC pattern (HPA: subcellular). |
| Strong staining in adipocytes or cardiomyocytes. | These cell types are listed as not detected (HPA: adipose tissue adipocytes; heart muscle cardiomyocytes). Recheck cell identification and compare a no-primary control. Persistent staining could reflect cross-reactivity or endogenous chromogenic detection activity (general IHC practice); the tissue result alone cannot distinguish those causes. |
| Diffuse color across nuclei, cytoplasm and tissue spaces. | A widespread, poorly localized deposit is difficult to reconcile with distinct nuclear expression (HPA: tissue IHC). Inspect a no-primary control and the counterstain, then review blocking, washes and development time (general IHC practice). Background in that control points toward the detection workflow rather than a defensible MCM2-positive cell assignment (general IHC practice). |
| No nuclear signal in a known-positive tissue section. | High staining is reported in lymph node germinal center cells, bone marrow hematopoietic cells and placental cytotrophoblasts (HPA: tissue IHC). Confirm that the relevant cells are present, then check the IHC antibody, retrieval, detection reagents and controls (general IHC practice). A blank section alone does not establish absent MCM2 expression. |
| Cell population and tissue | HPA reports high staining in germinal center cells, bone marrow hematopoietic cells, placental cytotrophoblasts and preleptotene spermatocytes; skin spinous-layer cells and colon enterocytes are medium, while adipocytes and cardiomyocytes are not detected (HPA: tissue IHC). Choose a control by its named cell population, not its tissue label alone. |
| Nuclear and chromatin association | MCM2 is nuclear and chromosomal; UniProt describes chromatin association before nuclei form and detachment as DNA replication progresses (UniProt P49736). This supports assessing nuclear localization while allowing for cell-cycle-dependent appearance. It does not provide an IHC scoring threshold or justify calling widespread cytoplasmic staining positive. |
| IHC antibody validation | HPA lists IHC as Enhanced for HPA031495, HPA031496 and CAB000303, while HPA031450 has no IHC status in the supplied antibody record (HPA: antibodies). Match any comparison to the antibody actually used. HPA's Enhanced tissue-profile reliability describes consistency with RNA data; it is a separate assessment (HPA: tissue IHC). |
| IF/ICC: should the same compartment be expected? | Yes: the supported main ICC-IF location is nucleoplasm (HPA: subcellular). HPA also lists vesicles, primary cilium and cytosol as uncertain additional locations, so those signals should not override a nuclear interpretation (HPA: subcellular). IF/ICC assay details belong in its separate guide. |
| Situation | Likely cause | Next action |
|---|---|---|
| Positive-control section is blank. | The selected section may lack the named positive cells, or the IHC workflow may have failed (HPA: tissue IHC; general IHC practice). | Verify germinal center cells in a lymph node section or hematopoietic cells in bone marrow, both high by HPA; then review antibody identity, retrieval and detection controls (HPA: tissue IHC; general IHC practice). |
| Only cytoplasm or cell borders are colored. | This conflicts with MCM2's nuclear and chromosomal location; the additional cytosol location is uncertain in ICC-IF (UniProt P49736; HPA: subcellular). | Compare nuclear morphology and a no-primary control, then review antibody validation and detection conditions (general IHC practice; HPA: antibodies). Do not score the nonnuclear deposit as the expected IHC result. |
| Adipocytes or cardiomyocytes appear strongly positive. | Both are reported as not detected (HPA: tissue IHC); nonspecific binding or endogenous detection activity are possible IHC causes (general IHC practice). | Confirm cell identity, run a no-primary control and check the relevant blocking and detection steps (general IHC practice). Interpret any remaining signal against the HPA cell-specific result. |
| The whole section has diffuse brown background. | Broad deposit obscures the distinct nuclear pattern reported by HPA (HPA: tissue IHC); incomplete blocking, washing or excessive development can contribute (general IHC practice). | Inspect a no-primary control; review blocking, washes and chromogen development using the assay's established procedure (general IHC practice). Reassess only clearly resolved nuclei. |
| A low-staining tissue gives few positive nuclei. | HPA lists salivary gland and stomach glandular cells, duodenal enterocytes and several other cell populations as low (HPA: tissue IHC). | Use an HPA high-staining cell population as a positive control before treating sparse staining as an assay failure (HPA: tissue IHC). Score the observed cells and compartment separately from overall tissue intensity. |
| Two sections show different fractions of stained nuclei. | HPA describes expression in proliferative cells, and UniProt links MCM2 to DNA replication and cell division (HPA: tissue IHC; UniProt P49736 function). Different sampled cell populations may therefore produce different fractions. | Compare matching tissue regions and named cell populations under the same scoring rule (general IHC practice). Check that nuclear staining remains distinct before interpreting a difference as biological. |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Enhanced — High consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Appendix | Germinal center cells | High | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | High | Protein (IHC) | HPA → |
| Lymph node | Germinal center cells | High | Protein (IHC) | HPA → |
| Placenta | Cytotrophoblasts | High | Protein (IHC) | HPA → |
| Skin | Cells in spinous layer | Medium | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Adrenal gland | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Bronchus | Basal cells | Not detected | Protein (IHC) | HPA → |
| Caudate | Glial cells | Not detected | Protein (IHC) | HPA → |
| Cerebellum | Cells in granular layer | Not detected | Protein (IHC) | HPA → |
Troubleshoot MCM2 staining in paraffin sections by checking retrieval, nuclear localisation, cell context and assay controls (datasheet M00374; UniProt P49736; HPA tissue IHC).
Anti-MCM2 antibodies have IHC images from human cancer paraffin sections (catalog IHC captions) and IF/ICC images from A431, HeLa and U20S cells (catalog IF captions).
M00374 has IHC data from human bladder cancer paraffin sections (M00374 IHC caption); A00374-1 has IHC data from human intestinal cancer paraffin sections and IF data from A431 cells (A00374-1 IHC and IF captions). M00374-1 has IHC data from human rectal cancer paraffin sections and IF data from HeLa cells (M00374-1 IHC and IF captions); PA1650 has IHC data from human lung cancer tissue and IF data from U20S cells (PA1650 IHC and IF captions).
Which to pick: For tissue IHC, choose rabbit monoclonal M00374 for a human paraffin section workflow using EDTA retrieval at pH 8.0 (M00374 catalog and IHC caption); its caption does not report the fixative (M00374 IHC caption). For IF/ICC, choose M00374-1 when a mouse monoclonal is useful: its application list includes IF and ICC, and its IF caption shows HeLa cells at 4 μg/ml (M00374-1 catalog and IF caption). For work across species, A00374-1 lists human, mouse and rat reactivity and has rat paraffin section IHC images; its human intestinal cancer IHC caption uses citrate retrieval at pH 6 and does not report the fixative (A00374-1 catalog and IHC captions).