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- Table of Contents
Plan chromogenic ACTB IHC on paraffin sections using high myoepithelial staining as a reference (HPA tissue IHC). This guide covers fixation, detection and interpretation, including the possibility of staining proteins from more than one gene (HPA tissue IHC).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Cytoplasmic cytoskeleton; nuclear ACTB also annotated (UniProt) | |
| Staining pattern | High in myoepithelial cells; compartment unreported (HPA tissue IHC) | |
| Antigen retrieval | Citrate pH 6 HIER, heat-mediated (datasheet M01263-3) | |
| Positive control | Appendix+4 more · see all | |
| Negative control | Adrenal gland+4 more · see all |
| Fixation | Keep fixation consistent across sections (standard IHC practice; not target-specific); Matched tissue-IHC evidence does not establish the fixation claim. Validate the specimen-specific method before use. (selected-SKU IHC image M01263-3) | |
| Caveat | Antibodies may detect proteins from more than one gene (HPA tissue IHC) | |
| Regulation | No intensity regulator established (UniProt) | |
| Isoform / epitope | No isoforms; N-terminal processing may affect N-terminal epitopes (UniProt) |
The catalog antibody’s IHC-P protocol (datasheet: M01263-3) is paired with published ACTB IHC methods for human hepatocellular carcinoma (PMC10772687) and paraffin sections (PMC12446288).
| Sample | Formaldehyde-fixed, paraffin-embedded human heart tissue (datasheet M01263-3) |
| Fixation | Image formalin-fixed; duration unreported (datasheet M01263-3); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: Citrate pH 6 (datasheet M01263-3); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% normal serum of the secondary host, 30 min, room temperature (standard) |
| Primary antibody | Mouse monoclonal (clone 137CT26.1.1) anti-ACTB, 1:25 (datasheet M01263-3) |
| Primary incubation | 1 hours at 37°C (datasheet M01263-3) |
| Detection | HRP-polymer secondary, DAB chromogen 5–10 min (standard) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | ACTB-positive staining in enterocytes - Microvilli of appendix (HPA tissue IHC: High). HPA tissue profile: High myoepithelial expression in all tissues. No signal in the no-primary control. |
ACTB is expected mainly in the cytoplasm and cytoskeleton; nuclear signal can also be genuine (UniProt P60709 subcellular location). In IHC, HPA reports high staining in myoepithelial cells and enterocyte microvilli, among other cell types (HPA tissue IHC). The tissue profile is Supported with medium staining–RNA consistency and a warning that the antibodies may target protein from more than one gene (HPA tissue IHC). ACTB has no transmembrane segment (UniProt P60709 topology).
| Cytoplasmic staining in breast myoepithelial cells, with signal following cell outlines. | This fits the reported high myoepithelial staining and ACTB’s cytoskeletal location (HPA tissue IHC; UniProt P60709 subcellular location). Judge the distribution in the named cells; an apparently strong field is less informative if the signal cannot be assigned to them (general IHC practice). |
| Strong staining at the microvilli of appendix, colon, or duodenal enterocytes. | This matches HPA’s high enterocyte microvillar staining in those tissues (HPA tissue IHC). A concentrated apical pattern can therefore be an expected positive result. Use the tissue architecture and counterstain to distinguish a cell-associated edge from stain deposited on the section surface (general IHC practice). |
| Signal confined to extracellular material or an apparent membrane rim, without corresponding cytoplasmic staining. | That distribution is discordant with ACTB’s cytoplasmic/cytoskeletal location and lack of a transmembrane segment (UniProt P60709 subcellular location; topology). Check for staining artefact before scoring it as ACTB. Nuclear staining alone needs separate assessment because UniProt also lists a nuclear location (UniProt P60709 subcellular location). |
| Strong staining only in a cell population reported as not detected, or colour in cells on a no-primary control. | For example, HPA reports no detection in bronchial respiratory epithelium, but that observation is antibody and context dependent (HPA tissue IHC). Unexpected staining raises cross-reactivity or endogenous detection activity; colour on a no-primary control particularly supports a detection-system problem (general IHC practice). |
| Uniform haze across cells, stroma, and empty spaces, or no signal in a known-positive compartment. | A nonanatomic haze obscures cell-level interpretation and suggests background from the staining workflow (general IHC practice). Conversely, absent staining in breast myoepithelial cells or colon enterocyte microvilli conflicts with HPA’s high observations and calls for a run-control review before a negative interpretation (HPA tissue IHC; general IHC practice). |
| Tissue and cell selection | HPA reports high signal in breast myoepithelial cells, placental endothelium, and enterocyte microvilli, but low signal in lung macrophages and heart cardiomyocytes (HPA tissue IHC). Choose a control by its named cell population; low or undetected populations provide weaker evidence that a run worked. |
| Specificity of the observed pattern | HPA rates tissue IHC Supported, describes medium consistency with RNA, and cautions that the antibodies may target protein from more than one gene (HPA tissue IHC). A matching pattern supports interpretation but does not, by itself, establish molecular specificity. The listed antibodies have IHC Supported status; ICC status is unreported (HPA antibodies). |
| Topology and processing | ACTB lacks a transmembrane segment and signal peptide, and UniProt lists cytoplasmic/cytoskeletal and nuclear locations (UniProt P60709 topology; processing; subcellular location). Interpret a purely extracellular or membrane-only pattern cautiously. UniProt lists full-length and N-terminally processed chains; the supplied record gives no antibody epitope, so it cannot predict which chain is detected (UniProt P60709 processing). |
| Antigen retrieval and fixation | No target-specific fixation sensitivity or retrieval condition is established by the supplied UniProt or HPA records. Retrieval is an IHC workflow variable to check against the IHC-validated antibody’s instructions and run controls (general IHC practice); HPA staining levels cannot be used to infer an ACTB-specific fixation effect. |
| IF/ICC question: can the IHC pattern be carried over? | UniProt lists cytoplasmic/cytoskeletal and nuclear ACTB (UniProt P60709 subcellular location). HPA supplies no main ICC-IF location or cell-line images, and the listed antibodies have no ICC validation status (HPA subcellular; HPA antibodies). Those records do not establish an IF/ICC staining pattern or protocol. |
| Situation | Likely cause | Next action |
|---|---|---|
| No stain in breast myoepithelial cells or colon enterocyte microvilli. | These are reported high IHC compartments, so their absence may indicate a failed staining run or an unsuitable control section (HPA tissue IHC; general IHC practice). | Confirm that the named cells are present, then review the IHC-validated antibody and detection controls, retrieval record, and reagent application before scoring the sample negative (general IHC practice). |
| Only weak signal in lung macrophages or heart cardiomyocytes. | HPA reports low staining in those cell types (HPA tissue IHC). Weak signal there alone does not show that the assay failed. | Compare with a reported high cell population on an appropriate control section, such as breast myoepithelial cells, before adjusting the workflow (HPA tissue IHC; general IHC practice). |
| Diffuse brown haze hides cell boundaries. | Background can arise from the detection workflow or insufficient blocking or washing (general IHC practice); the haze has no interpretable ACTB compartment. | Examine a no-primary control, review blocking and wash steps, and score only staining that can be assigned to cells and tissue structures (general IHC practice). |
| Colour appears in an unexpected cell type and on a no-primary control. | Signal without primary antibody points to endogenous detection activity or detection-reagent background (general IHC practice). HPA’s cross-gene targeting caution also limits specificity claims from unexpected staining (HPA tissue IHC). | Address the detection-system background and repeat the controls before attributing the cell-specific signal to ACTB (general IHC practice). |
| Apparent membrane-only or extracellular staining dominates the section. | That pattern conflicts with the listed cytoplasmic/cytoskeletal location and absence of a transmembrane segment (UniProt P60709 subcellular location; topology). | Inspect section morphology and controls for deposited stain or edge artefact; seek a cell-associated cytoplasmic pattern before calling it positive (general IHC practice). |
| A nuclear signal is present alongside cytoplasmic staining. | UniProt lists a nuclear location, so nuclear colour is not automatically discordant (UniProt P60709 subcellular location). HPA’s supplied ICC-IF record offers no image-based location check (HPA subcellular). | Check whether nuclear signal follows intact cells and is absent from the no-primary control; report it separately from the HPA tissue IHC pattern (general IHC practice; HPA tissue IHC). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Supported — Medium consistency between antibody staining and RNA expression data. Caution, targets protein from more than one gene.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Appendix | Enterocytes - Microvilli | High | Protein (IHC) | HPA → |
| Breast | Myoepithelial cells | High | Protein (IHC) | HPA → |
| Colon | Enterocytes - Microvilli | High | Protein (IHC) | HPA → |
| Duodenum | Enterocytes - Microvilli | High | Protein (IHC) | HPA → |
| Epididymis | Glandular cells | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adrenal gland | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Bronchus | Respiratory epithelial cells | Not detected | Protein (IHC) | HPA → |
| Caudate | Glial cells | Not detected | Protein (IHC) | HPA → |
| Cerebellum | Cells in granular layer | Not detected | Protein (IHC) | HPA → |
| Cerebral cortex | Glial cells | Not detected | Protein (IHC) | HPA → |
Troubleshoot ACTB staining in paraffin sections by checking retrieval, cell type, compartment and controls before interpreting intensity.
Six anti-ACTB antibodies have IHC images from human or mouse tissues, or IF/ICC images from HeLa cells (catalog image captions); all list human reactivity (catalog reactivity).
M01263-3 shows human heart IHC-P; M01263 shows IHC in human heart, human bladder cancer, mouse testis and mouse heart; M01263-4 shows human heart IHC; and M01263-8 shows human colon staining (catalog IHC image captions). A01263-1 and A01263-2 show HeLa cell ICC/IF images, while both list IF among their applications (catalog image captions and applications).
Which to pick: For tissue IHC-P, choose M01263-3 when its documented formaldehyde fixation and citrate pH 6 retrieval suit the experiment (M01263-3 IHC image caption). For HeLa cell IF/ICC, consider A01263-1, which lists both applications and has corresponding images; A01263-2 has HeLa ICC/IF images and lists IF (catalog applications and image captions). For the broadest listed species coverage, choose M01263-4, a mouse monoclonal reactive with chicken, human, mouse, pig, rabbit and rat; its IHC image shows a paraffin-embedded human heart section, with fixative unreported (catalog host, reactivity and IHC image caption).